| Chain sequence(s) |
A: AGGERVYLPNLNADQLCAFIRSLEDDPSQSANLLAEAKKLNDAQAPASSSSGSSSSGRASAGGERVYLPNLNADQLCAFIRSLEDDPSQSANLLAEAKKLNDAQAPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.5466 | |
| 2 | G | A | -1.4477 | |
| 3 | G | A | -2.3435 | |
| 4 | E | A | -2.8078 | |
| 5 | R | A | -2.6945 | |
| 6 | V | A | -0.7415 | |
| 7 | Y | A | 0.3900 | |
| 8 | L | A | 0.0000 | |
| 9 | P | A | -0.1665 | |
| 10 | N | A | -0.8178 | |
| 11 | L | A | 0.0000 | |
| 12 | N | A | -1.1974 | |
| 13 | A | A | -1.2816 | |
| 14 | D | A | -2.0041 | |
| 15 | Q | A | -1.1601 | |
| 16 | L | A | 0.0000 | |
| 17 | C | A | -1.2995 | |
| 18 | A | A | -1.0419 | |
| 19 | F | A | -1.0061 | |
| 20 | I | A | -1.8917 | |
| 21 | R | A | -3.0757 | |
| 22 | S | A | -2.6077 | |
| 23 | L | A | -2.7273 | |
| 24 | E | A | -3.9865 | |
| 25 | D | A | -4.2081 | |
| 26 | D | A | -3.8968 | |
| 27 | P | A | -2.7845 | |
| 28 | S | A | -1.8976 | |
| 29 | Q | A | -2.2970 | |
| 30 | S | A | -1.6812 | |
| 31 | A | A | -0.9213 | |
| 32 | N | A | -1.6785 | |
| 33 | L | A | -1.3958 | |
| 34 | L | A | -1.0358 | |
| 35 | A | A | -1.5146 | |
| 36 | E | A | -2.2344 | |
| 37 | A | A | 0.0000 | |
| 38 | K | A | -2.2746 | |
| 39 | K | A | -2.9800 | |
| 40 | L | A | -1.7673 | |
| 41 | N | A | 0.0000 | |
| 42 | D | A | -2.8021 | |
| 43 | A | A | -1.5309 | |
| 44 | Q | A | -1.3062 | |
| 45 | A | A | -1.1362 | |
| 46 | P | A | -0.6630 | |
| 47 | A | A | -0.6187 | |
| 48 | S | A | -0.4300 | |
| 49 | S | A | -0.4825 | |
| 50 | S | A | -0.5580 | |
| 51 | S | A | -0.6577 | |
| 52 | G | A | -0.7633 | |
| 53 | S | A | -0.6454 | |
| 54 | S | A | -0.5770 | |
| 55 | S | A | -0.5805 | |
| 56 | S | A | -1.0056 | |
| 57 | G | A | -1.5942 | |
| 58 | R | A | -2.1701 | |
| 59 | A | A | -1.1970 | |
| 60 | S | A | -1.2836 | |
| 61 | A | A | -0.8506 | |
| 62 | G | A | -1.3826 | |
| 63 | G | A | -2.0709 | |
| 64 | E | A | -2.6898 | |
| 65 | R | A | -2.4418 | |
| 66 | V | A | -0.8017 | |
| 67 | Y | A | 0.3625 | |
| 68 | L | A | 0.0000 | |
| 69 | P | A | -0.0093 | |
| 70 | N | A | -0.8548 | |
| 71 | L | A | 0.0000 | |
| 72 | N | A | -1.4685 | |
| 73 | A | A | -1.3195 | |
| 74 | D | A | -2.0739 | |
| 75 | Q | A | -1.2427 | |
| 76 | L | A | -0.9268 | |
| 77 | C | A | -1.3219 | |
| 78 | A | A | -1.1715 | |
| 79 | F | A | 0.0000 | |
| 80 | I | A | -1.9796 | |
| 81 | R | A | -3.2385 | |
| 82 | S | A | -2.5979 | |
| 83 | L | A | -2.7920 | |
| 84 | E | A | -4.1403 | |
| 85 | D | A | -4.1967 | |
| 86 | D | A | -3.8639 | |
| 87 | P | A | -2.7800 | |
| 88 | S | A | -1.9295 | |
| 89 | Q | A | -2.3803 | |
| 90 | S | A | -1.8731 | |
| 91 | A | A | -1.0137 | |
| 92 | N | A | -1.8083 | |
| 93 | L | A | -1.6541 | |
| 94 | L | A | -1.4029 | |
| 95 | A | A | -1.8484 | |
| 96 | E | A | -2.7914 | |
| 97 | A | A | 0.0000 | |
| 98 | K | A | -2.7691 | |
| 99 | K | A | -3.3310 | |
| 100 | L | A | -2.0598 | |
| 101 | N | A | -2.1546 | |
| 102 | D | A | -3.2317 | |
| 103 | A | A | -1.8855 | |
| 104 | Q | A | -1.7238 | |
| 105 | A | A | -1.6406 | |
| 106 | P | A | -1.4519 | |
| 107 | K | A | -2.0685 |