| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWASWLVAFFDSFLIQYQESEKVGEAIVLIVPGSERSYDLTGLKPGTEYTVSIYGVYQRHASAFVSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.1599 | |
| 2 | P | A | 0.1542 | |
| 3 | A | A | -0.4330 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.8458 | |
| 6 | N | A | -1.5529 | |
| 7 | L | A | -0.1789 | |
| 8 | V | A | 1.2341 | |
| 9 | V | A | 0.7119 | |
| 10 | S | A | -0.5990 | |
| 11 | R | A | -1.8310 | |
| 12 | V | A | -0.9595 | |
| 13 | T | A | -1.7138 | |
| 14 | E | A | -2.7797 | |
| 15 | D | A | -2.5501 | |
| 16 | S | A | -2.0235 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2694 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.4021 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -0.3587 | |
| 23 | S | A | 0.5835 | |
| 24 | W | A | 1.8321 | |
| 25 | L | A | 2.7780 | |
| 26 | V | A | 2.5023 | |
| 27 | A | A | 1.1297 | |
| 28 | F | A | 1.1688 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.1740 | |
| 31 | S | A | -0.4624 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | 1.6934 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | 1.0207 | |
| 36 | Y | A | 0.5242 | |
| 37 | Q | A | -0.5749 | |
| 38 | E | A | 0.0000 | |
| 39 | S | A | -1.3455 | |
| 40 | E | A | -2.3982 | |
| 41 | K | A | -1.6671 | |
| 42 | V | A | 0.1198 | |
| 43 | G | A | -0.8427 | |
| 44 | E | A | -1.6051 | |
| 45 | A | A | -0.1106 | |
| 46 | I | A | 1.1037 | |
| 47 | V | A | 2.4555 | |
| 48 | L | A | 2.3365 | |
| 49 | I | A | 2.5485 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.6494 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -0.7724 | |
| 54 | E | A | -1.3043 | |
| 55 | R | A | -0.7071 | |
| 56 | S | A | -0.6742 | |
| 57 | Y | A | -0.8291 | |
| 58 | D | A | -1.9270 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4488 | |
| 61 | G | A | -1.4358 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9039 | |
| 64 | P | A | -2.5635 | |
| 65 | G | A | -1.8881 | |
| 66 | T | A | -2.2172 | |
| 67 | E | A | -1.9634 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | 0.0653 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.2607 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | 0.7785 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | 0.6024 | |
| 76 | Y | A | -0.2387 | |
| 77 | Q | A | -2.0294 | |
| 78 | R | A | -2.7034 | |
| 79 | H | A | -2.0877 | |
| 80 | A | A | -1.1327 | |
| 81 | S | A | -0.9666 | |
| 82 | A | A | -0.3060 | |
| 83 | F | A | 1.2946 | |
| 84 | V | A | 2.0422 | |
| 85 | S | A | 0.0000 | |
| 86 | N | A | -0.7231 | |
| 87 | P | A | -0.5285 | |
| 88 | L | A | -0.6680 | |
| 89 | S | A | 0.0715 | |
| 90 | A | A | 1.1987 | |
| 91 | I | A | 1.8190 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -0.8524 | |
| 94 | T | A | -1.9237 |