| Chain sequence(s) |
B: SALMKEIMELSEKMKEHMKKAWETLGEESEKYLALAKEYGKKIKEIFEKA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:29)
[INFO] Main: Simulation completed successfully. (00:02:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.3974 | |
| 2 | A | B | -0.4692 | |
| 3 | L | B | 0.0740 | |
| 4 | M | B | -0.2888 | |
| 5 | K | B | -2.0989 | |
| 6 | E | B | -2.4136 | |
| 7 | I | B | 0.0000 | |
| 8 | M | B | -1.3486 | |
| 9 | E | B | -2.5618 | |
| 10 | L | B | 0.0000 | |
| 11 | S | B | -2.2829 | |
| 12 | E | B | -3.4024 | |
| 13 | K | B | -2.9295 | |
| 14 | M | B | -2.6462 | |
| 15 | K | B | -3.4561 | |
| 16 | E | B | -3.6362 | |
| 17 | H | B | -2.5787 | |
| 18 | M | B | -1.9766 | |
| 19 | K | B | -2.8033 | |
| 20 | K | B | -2.7693 | |
| 21 | A | B | 0.0000 | |
| 22 | W | B | -0.6302 | |
| 23 | E | B | -1.8028 | |
| 24 | T | B | -1.4691 | |
| 25 | L | B | -0.0988 | |
| 26 | G | B | -1.7066 | |
| 27 | E | B | -3.4411 | |
| 28 | E | B | -3.4912 | |
| 29 | S | B | -2.4776 | |
| 30 | E | B | -3.2316 | |
| 31 | K | B | -3.5446 | |
| 32 | Y | B | -2.4779 | |
| 33 | L | B | -1.4529 | |
| 34 | A | B | -1.6301 | |
| 35 | L | B | -1.5665 | |
| 36 | A | B | -2.4087 | |
| 37 | K | B | -2.8771 | |
| 38 | E | B | -3.2664 | |
| 39 | Y | B | -2.9285 | |
| 40 | G | B | -2.9512 | |
| 41 | K | B | -3.8774 | |
| 42 | K | B | -3.4700 | |
| 43 | I | B | -2.4422 | |
| 44 | K | B | -3.4048 | |
| 45 | E | B | -3.3913 | |
| 46 | I | B | 0.0000 | |
| 47 | F | B | -0.5907 | |
| 48 | E | B | -2.7061 | |
| 49 | K | B | -2.5434 | |
| 50 | A | B | -0.9261 |