| Chain sequence(s) |
A: MPDLSSFITIKNNSNHVFTRTAIYSKYAAVQWSPEPQLSISPGKWDLFILKDILSIRGTSGYVQYRVGDGPGWVRVTFSSLVGADEVAEWSSGDLPDGFVLQKPVRTGSRPLQATFEATKQLEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9331 | |
| 2 | P | A | -0.3329 | |
| 3 | D | A | -1.1334 | |
| 4 | L | A | 0.0000 | |
| 5 | S | A | 0.0000 | |
| 6 | S | A | 0.0000 | |
| 7 | F | A | 0.2448 | |
| 8 | I | A | 0.0000 | |
| 9 | T | A | 0.4779 | |
| 10 | I | A | 0.0000 | |
| 11 | K | A | -1.0043 | |
| 12 | N | A | 0.0000 | |
| 13 | N | A | -1.9193 | |
| 14 | S | A | 0.0000 | |
| 15 | N | A | -1.8914 | |
| 16 | H | A | -1.3266 | |
| 17 | V | A | -0.4746 | |
| 18 | F | A | 0.0000 | |
| 19 | T | A | -0.4827 | |
| 20 | R | A | -0.3590 | |
| 21 | T | A | -0.3200 | |
| 22 | A | A | 0.2852 | |
| 23 | I | A | 0.7145 | |
| 24 | Y | A | 0.8338 | |
| 25 | S | A | -0.3044 | |
| 26 | K | A | -1.3788 | |
| 27 | Y | A | -0.8785 | |
| 28 | A | A | -0.1328 | |
| 29 | A | A | 0.2819 | |
| 30 | V | A | 0.0000 | |
| 31 | Q | A | -1.3111 | |
| 32 | W | A | -1.2981 | |
| 33 | S | A | -1.0765 | |
| 34 | P | A | -1.2700 | |
| 35 | E | A | -1.9120 | |
| 36 | P | A | 0.0000 | |
| 37 | Q | A | -0.6783 | |
| 38 | L | A | 0.5834 | |
| 39 | S | A | 0.1248 | |
| 40 | I | A | 0.0000 | |
| 41 | S | A | -0.6572 | |
| 42 | P | A | -1.2418 | |
| 43 | G | A | -1.6118 | |
| 44 | K | A | -1.6105 | |
| 45 | W | A | -0.2043 | |
| 46 | D | A | 0.0000 | |
| 47 | L | A | 0.4721 | |
| 48 | F | A | 0.0000 | |
| 49 | I | A | -0.4209 | |
| 50 | L | A | 0.0000 | |
| 51 | K | A | -0.6814 | |
| 52 | D | A | 0.0620 | |
| 53 | I | A | 1.6251 | |
| 54 | L | A | 2.0107 | |
| 55 | S | A | 1.1861 | |
| 56 | I | A | 1.5331 | |
| 57 | R | A | -0.2206 | |
| 58 | G | A | 0.0000 | |
| 59 | T | A | 0.0000 | |
| 60 | S | A | -0.4652 | |
| 61 | G | A | 0.0000 | |
| 62 | Y | A | 0.2331 | |
| 63 | V | A | 0.0000 | |
| 64 | Q | A | -0.4398 | |
| 65 | Y | A | 0.0000 | |
| 66 | R | A | -1.6954 | |
| 67 | V | A | 0.0000 | |
| 68 | G | A | -1.2933 | |
| 69 | D | A | -2.1314 | |
| 70 | G | A | -1.6562 | |
| 71 | P | A | -1.3741 | |
| 72 | G | A | 0.0000 | |
| 73 | W | A | -0.9368 | |
| 74 | V | A | 0.0000 | |
| 75 | R | A | -0.7939 | |
| 76 | V | A | 0.0000 | |
| 77 | T | A | -0.0220 | |
| 78 | F | A | 0.0000 | |
| 79 | S | A | -0.1275 | |
| 80 | S | A | 0.0000 | |
| 81 | L | A | 0.0997 | |
| 82 | V | A | 0.5403 | |
| 83 | G | A | -0.4108 | |
| 84 | A | A | -0.5629 | |
| 85 | D | A | -1.5835 | |
| 86 | E | A | -0.9791 | |
| 87 | V | A | -0.0910 | |
| 88 | A | A | -0.4084 | |
| 89 | E | A | -0.5604 | |
| 90 | W | A | -0.7521 | |
| 91 | S | A | -0.3641 | |
| 92 | S | A | -0.6128 | |
| 93 | G | A | -1.0603 | |
| 94 | D | A | -1.9233 | |
| 95 | L | A | -0.9869 | |
| 96 | P | A | -1.4876 | |
| 97 | D | A | -2.2753 | |
| 98 | G | A | -1.8885 | |
| 99 | F | A | -1.1615 | |
| 100 | V | A | -0.7713 | |
| 101 | L | A | -0.5865 | |
| 102 | Q | A | -0.9382 | |
| 103 | K | A | -1.7367 | |
| 104 | P | A | -0.6038 | |
| 105 | V | A | 0.2670 | |
| 106 | R | A | -1.1675 | |
| 107 | T | A | -0.9787 | |
| 108 | G | A | -1.2787 | |
| 109 | S | A | -1.5212 | |
| 110 | R | A | -1.3349 | |
| 111 | P | A | -1.2331 | |
| 112 | L | A | 0.0000 | |
| 113 | Q | A | -0.9720 | |
| 114 | A | A | 0.0000 | |
| 115 | T | A | -0.2040 | |
| 116 | F | A | 0.0000 | |
| 117 | E | A | -0.8884 | |
| 118 | A | A | 0.0000 | |
| 119 | T | A | -1.5728 | |
| 120 | K | A | -2.6771 | |
| 121 | Q | A | -2.0255 | |
| 122 | L | A | -0.7976 | |
| 123 | E | A | -2.5941 | |
| 124 | H | A | -2.5617 | |
| 125 | H | A | -2.7607 | |
| 126 | H | A | -2.9829 | |
| 127 | H | A | -2.7141 | |
| 128 | H | A | -2.4090 | |
| 129 | H | A | -1.9132 |