| Chain sequence(s) |
A: LQVDIVPSQGEISVGESKFFLCQVAGSGSDIRISWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVYRTGGYRHRALVLGEATVNVKIFQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.4119 | |
| 2 | Q | A | -1.1759 | |
| 3 | V | A | -1.3788 | |
| 4 | D | A | -1.5727 | |
| 5 | I | A | 0.0000 | |
| 6 | V | A | 0.8839 | |
| 7 | P | A | 0.0892 | |
| 8 | S | A | -0.6551 | |
| 9 | Q | A | -1.7238 | |
| 10 | G | A | 0.0000 | |
| 11 | E | A | -2.4994 | |
| 12 | I | A | 0.0000 | |
| 13 | S | A | -0.9789 | |
| 14 | V | A | -0.2843 | |
| 15 | G | A | -1.3980 | |
| 16 | E | A | -2.3472 | |
| 17 | S | A | -1.1060 | |
| 18 | K | A | -0.4401 | |
| 19 | F | A | 1.9650 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | 0.9399 | |
| 22 | C | A | 0.0000 | |
| 23 | Q | A | -1.4100 | |
| 24 | V | A | 0.0000 | |
| 25 | A | A | -0.5940 | |
| 26 | G | A | -0.5274 | |
| 27 | S | A | -0.8887 | |
| 28 | G | A | -1.3839 | |
| 29 | S | A | -1.7844 | |
| 30 | D | A | -2.8920 | |
| 31 | I | A | -1.9303 | |
| 32 | R | A | -1.8303 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | -1.4256 | |
| 37 | S | A | -1.3917 | |
| 38 | P | A | -1.2783 | |
| 39 | N | A | -2.0971 | |
| 40 | G | A | -2.2568 | |
| 41 | E | A | -3.2430 | |
| 42 | K | A | -2.8145 | |
| 43 | L | A | -1.5723 | |
| 44 | T | A | -1.0413 | |
| 45 | P | A | -0.9453 | |
| 46 | N | A | -1.9169 | |
| 47 | Q | A | -1.9619 | |
| 48 | Q | A | -2.0639 | |
| 49 | R | A | -1.4721 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | -0.2084 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.7398 | |
| 54 | W | A | -0.6165 | |
| 55 | N | A | -1.9035 | |
| 56 | D | A | -3.0371 | |
| 57 | D | A | -3.4662 | |
| 58 | S | A | -2.1291 | |
| 59 | S | A | -1.6339 | |
| 60 | S | A | 0.0000 | |
| 61 | T | A | 0.7524 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.8993 | |
| 64 | I | A | 0.0000 | |
| 65 | Y | A | -0.6787 | |
| 66 | N | A | -2.0655 | |
| 67 | A | A | 0.0000 | |
| 68 | N | A | -1.1327 | |
| 69 | I | A | 0.1931 | |
| 70 | D | A | -1.3635 | |
| 71 | D | A | 0.0000 | |
| 72 | A | A | -0.5641 | |
| 73 | G | A | -0.2349 | |
| 74 | I | A | 0.3919 | |
| 75 | Y | A | 0.0000 | |
| 76 | K | A | -1.1959 | |
| 77 | C | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.5559 | |
| 81 | R | A | -1.6705 | |
| 82 | T | A | -1.9220 | |
| 83 | G | A | -1.8788 | |
| 84 | G | A | -1.4467 | |
| 85 | Y | A | -0.4158 | |
| 86 | R | A | -2.5088 | |
| 87 | H | A | -2.5803 | |
| 88 | R | A | -2.5723 | |
| 89 | A | A | -1.0202 | |
| 90 | L | A | 0.8020 | |
| 91 | V | A | 1.1655 | |
| 92 | L | A | 0.6554 | |
| 93 | G | A | -0.4370 | |
| 94 | E | A | -1.8860 | |
| 95 | A | A | -1.6561 | |
| 96 | T | A | -0.7068 | |
| 97 | V | A | 0.0000 | |
| 98 | N | A | -1.0273 | |
| 99 | V | A | 0.0000 | |
| 100 | K | A | -1.5195 | |
| 101 | I | A | -0.6796 | |
| 102 | F | A | 0.2309 | |
| 103 | Q | A | -0.2369 |