Project name: query_structure

Status: done

Started: 2026-03-16 21:45:56
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFTIQYEELTTVGEAIYLRVPGSERSYDLTGLKPGTEYVVWIEGVKGGLRSNPLGAAFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-3.1516
Maximal score value
1.4677
Average score
-0.6338
Total score value
-57.0447

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8214
2 L A 0.0490
3 P A -0.6296
4 A A -1.1147
5 P A 0.0000
6 K A -1.9899
7 N A -1.3134
8 L A 0.0312
9 V A 1.1969
10 V A 0.4300
11 S A -0.6147
12 R A -2.0669
13 V A -1.1536
14 T A -1.8698
15 E A -3.1516
16 D A -2.8745
17 S A -2.1613
18 A A 0.0000
19 R A -1.2357
20 L A 0.0000
21 S A -0.2987
22 W A 0.0000
23 T A -1.2632
24 A A -1.4272
25 P A -1.4096
26 D A -2.2606
27 A A -1.4390
28 A A -1.2305
29 F A 0.0000
30 D A -2.4473
31 S A 0.0000
32 F A 0.0000
33 T A 0.0000
34 I A 0.0000
35 Q A 0.5087
36 Y A 0.4753
37 E A 0.1035
38 E A -0.1612
39 L A 1.3237
40 T A 0.6623
41 T A 0.6367
42 V A 1.4677
43 G A 0.0128
44 E A -1.2566
45 A A -0.0559
46 I A 0.8197
47 Y A 1.1485
48 L A 0.1682
49 R A -1.5466
50 V A 0.0000
51 P A -1.5322
52 G A 0.0000
53 S A -1.5940
54 E A -1.5374
55 R A -1.1869
56 S A -0.6699
57 Y A -0.8004
58 D A -1.6909
59 L A 0.0000
60 T A -1.3824
61 G A -1.5353
62 L A 0.0000
63 K A -3.0824
64 P A -2.6012
65 G A -1.8382
66 T A 0.0000
67 E A -0.9606
68 Y A 0.0000
69 V A 0.2470
70 V A 0.0000
71 W A 0.3775
72 I A 0.0000
73 E A -1.1363
74 G A 0.0000
75 V A 0.0000
76 K A -1.9676
77 G A -1.4154
78 G A -1.0817
79 L A -0.4065
80 R A -1.5726
81 S A 0.0000
82 N A -1.2075
83 P A -0.9609
84 L A -0.4735
85 G A 0.0651
86 A A 0.4632
87 A A 0.3335
88 F A 0.0000
89 T A -0.8852
90 T A -1.8955
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Laboratory of Theory of Biopolymers 2018