| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFTIQYEELTTVGEAIYLRVPGSERSYDLTGLKPGTEYVVWIEGVKGGLRSNPLGAAFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8214 | |
| 2 | L | A | 0.0490 | |
| 3 | P | A | -0.6296 | |
| 4 | A | A | -1.1147 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.9899 | |
| 7 | N | A | -1.3134 | |
| 8 | L | A | 0.0312 | |
| 9 | V | A | 1.1969 | |
| 10 | V | A | 0.4300 | |
| 11 | S | A | -0.6147 | |
| 12 | R | A | -2.0669 | |
| 13 | V | A | -1.1536 | |
| 14 | T | A | -1.8698 | |
| 15 | E | A | -3.1516 | |
| 16 | D | A | -2.8745 | |
| 17 | S | A | -2.1613 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2357 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2987 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2632 | |
| 24 | A | A | -1.4272 | |
| 25 | P | A | -1.4096 | |
| 26 | D | A | -2.2606 | |
| 27 | A | A | -1.4390 | |
| 28 | A | A | -1.2305 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.4473 | |
| 31 | S | A | 0.0000 | |
| 32 | F | A | 0.0000 | |
| 33 | T | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | 0.5087 | |
| 36 | Y | A | 0.4753 | |
| 37 | E | A | 0.1035 | |
| 38 | E | A | -0.1612 | |
| 39 | L | A | 1.3237 | |
| 40 | T | A | 0.6623 | |
| 41 | T | A | 0.6367 | |
| 42 | V | A | 1.4677 | |
| 43 | G | A | 0.0128 | |
| 44 | E | A | -1.2566 | |
| 45 | A | A | -0.0559 | |
| 46 | I | A | 0.8197 | |
| 47 | Y | A | 1.1485 | |
| 48 | L | A | 0.1682 | |
| 49 | R | A | -1.5466 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5322 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5940 | |
| 54 | E | A | -1.5374 | |
| 55 | R | A | -1.1869 | |
| 56 | S | A | -0.6699 | |
| 57 | Y | A | -0.8004 | |
| 58 | D | A | -1.6909 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3824 | |
| 61 | G | A | -1.5353 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0824 | |
| 64 | P | A | -2.6012 | |
| 65 | G | A | -1.8382 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -0.9606 | |
| 68 | Y | A | 0.0000 | |
| 69 | V | A | 0.2470 | |
| 70 | V | A | 0.0000 | |
| 71 | W | A | 0.3775 | |
| 72 | I | A | 0.0000 | |
| 73 | E | A | -1.1363 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | K | A | -1.9676 | |
| 77 | G | A | -1.4154 | |
| 78 | G | A | -1.0817 | |
| 79 | L | A | -0.4065 | |
| 80 | R | A | -1.5726 | |
| 81 | S | A | 0.0000 | |
| 82 | N | A | -1.2075 | |
| 83 | P | A | -0.9609 | |
| 84 | L | A | -0.4735 | |
| 85 | G | A | 0.0651 | |
| 86 | A | A | 0.4632 | |
| 87 | A | A | 0.3335 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.8852 | |
| 90 | T | A | -1.8955 |