| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDYYVITYGETGYYAYFQEFEVPGSKSTATISGLKPGVDYTITVYAAGYGYYYGNPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7292 | |
| 2 | S | A | 0.2388 | |
| 3 | D | A | -0.2379 | |
| 4 | V | A | -0.5858 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5996 | |
| 7 | D | A | -3.6222 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1465 | |
| 10 | V | A | 0.1461 | |
| 11 | V | A | 1.5653 | |
| 12 | A | A | 0.9197 | |
| 13 | A | A | 0.3400 | |
| 14 | T | A | -0.3315 | |
| 15 | P | A | -1.1054 | |
| 16 | T | A | -0.9929 | |
| 17 | S | A | -0.5204 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7920 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1901 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3979 | |
| 24 | A | A | -1.7542 | |
| 25 | P | A | -0.4878 | |
| 26 | A | A | 0.4281 | |
| 27 | V | A | 0.5177 | |
| 28 | T | A | -0.0952 | |
| 29 | V | A | -0.4691 | |
| 30 | D | A | -1.4808 | |
| 31 | Y | A | -1.1239 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.2820 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.3547 | |
| 39 | T | A | -0.1834 | |
| 40 | G | A | 0.4296 | |
| 41 | Y | A | 1.8937 | |
| 42 | Y | A | 2.1719 | |
| 43 | A | A | 1.5977 | |
| 44 | Y | A | 1.6875 | |
| 45 | F | A | 0.6636 | |
| 46 | Q | A | -1.0345 | |
| 47 | E | A | -2.0907 | |
| 48 | F | A | -1.3439 | |
| 49 | E | A | -1.8566 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5297 | |
| 52 | G | A | -1.5703 | |
| 53 | S | A | -1.3893 | |
| 54 | K | A | -2.2119 | |
| 55 | S | A | -1.4100 | |
| 56 | T | A | -0.7535 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2536 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6530 | |
| 61 | G | A | -1.0265 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3610 | |
| 64 | P | A | -1.6676 | |
| 65 | G | A | -1.4614 | |
| 66 | V | A | -1.4181 | |
| 67 | D | A | -1.9008 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.5274 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.0909 | |
| 74 | A | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | G | A | 0.0000 | |
| 77 | Y | A | 1.2924 | |
| 78 | G | A | 0.7108 | |
| 79 | Y | A | 1.5820 | |
| 80 | Y | A | 1.4612 | |
| 81 | Y | A | 0.5554 | |
| 82 | G | A | -0.6382 | |
| 83 | N | A | -1.2596 | |
| 84 | P | A | -0.6575 | |
| 85 | I | A | -0.6415 | |
| 86 | S | A | -0.8342 | |
| 87 | I | A | -0.7042 | |
| 88 | N | A | -1.6960 | |
| 89 | Y | A | -1.4466 | |
| 90 | R | A | -2.5195 | |
| 91 | T | A | -1.6358 |