Project name: Z002

Status: done

Started: 2026-05-16 18:44:25
Settings
Chain sequence(s) A: AIQLTQSPSSLSASVGDRVTITCRESQDISSALVWYQQKPHKAPKLLIYDASSLESGVPSRFSGSESGTDFTLTISSLQPEDFATTYCQQFNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVILRESGGGVCQPGRSLRLSCPASGFTFSTYGMHWVRQAPGKGLEWVAVIWDDGSYKYYGDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGITMVRGVMKDYFDYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:32)
Show buried residues

Minimal score value
-2.0153
Maximal score value
1.7552
Average score
-0.2601
Total score value
-64.2392

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.0999
2 I A 0.0139
3 Q A -1.1245
4 L A -0.0722
5 T A -0.2550
6 Q A -0.1575
7 S A -0.1754
8 P A -0.1830
9 S A -0.2712
10 S A -0.2884
11 L A 0.1438
12 S A -0.3085
13 A A -0.0467
14 S A -0.0019
15 V A 1.2952
16 G A -0.3463
17 D A -1.2868
18 R A -2.0153
19 V A 0.0000
20 T A -0.0671
21 I A 0.0000
22 T A -0.0301
23 C A 0.0000
24 R A -1.9120
25 E A 0.0000
26 S A -0.4113
27 Q A -1.5591
28 D A -2.0075
29 I A 0.0000
30 S A -0.0400
31 S A -0.1040
32 A A 0.0000
33 L A 0.0000
34 V A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A -0.1243
38 Q A 0.0000
39 K A -0.9173
40 P A -0.4927
41 H A -1.3369
42 K A -1.8845
43 A A -0.3105
44 P A 0.0000
45 K A -1.6736
46 L A 0.0000
47 L A 0.0000
48 I A 0.0000
49 Y A 0.1943
50 D A -0.2891
51 A A 0.0000
52 S A -0.2341
53 S A -0.0065
54 L A 0.4523
55 E A -0.3924
56 S A -0.3830
57 G A -0.5050
58 V A 0.0000
59 P A -0.1661
60 S A -0.2859
61 R A -0.3113
62 F A 0.0000
63 S A -0.1687
64 G A -0.1571
65 S A -0.3795
66 E A -0.9168
67 S A -0.4543
68 G A -0.5089
69 T A -0.1992
70 D A -0.7235
71 F A 0.0000
72 T A -0.0192
73 L A 0.0000
74 T A -0.0236
75 I A 0.0000
76 S A -0.3147
77 S A -0.1763
78 L A 0.0000
79 Q A -0.5693
80 P A -0.5552
81 E A -1.6357
82 D A 0.0000
83 F A 0.8303
84 A A 0.0000
85 T A -0.0909
86 T A 0.0000
87 Y A 0.0000
88 C A 0.0000
89 Q A 0.0000
90 Q A 0.0000
91 F A 0.0000
92 N A -0.3443
93 S A -0.1383
94 Y A 0.3356
95 P A 0.0527
96 L A 0.0000
97 T A 0.0289
98 F A 0.2080
99 G A 0.0000
100 G A -0.4663
101 G A 0.0000
102 T A 0.0000
103 K A -0.6231
104 V A 0.0000
105 E A -1.0544
106 I A -0.1660
107 K A -1.7338
108 G A -0.8556
109 G A -0.6301
110 G A -0.6413
111 G A -0.5936
112 S A -0.3761
113 G A -0.5868
114 G A -0.6324
115 G A -0.6378
116 G A -0.5927
117 S A -0.3824
118 G A -0.5980
119 G A -0.6422
120 G A -0.6345
121 G A -0.5909
122 S A -0.5195
123 Q A -1.2010
124 V A 0.2119
125 I A 1.5729
126 L A 0.0000
127 R A -0.7182
128 E A 0.0000
129 S A -0.2176
130 G A -0.2954
131 G A -0.2806
132 G A 0.1368
133 V A 1.7552
134 C A 0.2277
135 Q A -0.9910
136 P A -0.3872
137 G A -0.8140
138 R A -1.7494
139 S A -0.5122
140 L A -0.1230
141 R A -1.8782
142 L A 0.0000
143 S A -0.0172
144 C A 0.0000
145 P A -0.1161
146 A A 0.0000
147 S A -0.2947
148 G A -0.4193
149 F A 0.1989
150 T A -0.0167
151 F A 0.0000
152 S A -0.1234
153 T A -0.0226
154 Y A 0.2602
155 G A 0.0000
156 M A 0.0000
157 H A 0.0000
158 W A 0.0000
159 V A 0.0000
160 R A 0.0000
161 Q A -0.1546
162 A A -0.0630
163 P A -0.3401
164 G A -0.8393
165 K A -1.8202
166 G A -0.4816
167 L A 0.0000
168 E A -0.7275
169 W A 0.0000
170 V A 0.0000
171 A A 0.0000
172 V A 0.0000
173 I A 0.0000
174 W A 0.3678
175 D A -0.7919
176 D A -1.9323
177 G A -0.5618
178 S A -0.0382
179 Y A 0.8710
180 K A -0.6983
181 Y A 0.3010
182 Y A 0.3146
183 G A 0.0000
184 D A -1.8141
185 S A -0.4663
186 V A 0.0000
187 K A -1.7873
188 G A -0.8452
189 R A -0.4145
190 F A 0.0000
191 T A -0.1018
192 I A 0.0000
193 S A -0.1249
194 R A -0.3804
195 D A -0.9008
196 N A -0.8798
197 S A -0.6375
198 K A -1.8547
199 N A -1.0054
200 T A 0.0000
201 L A 0.0000
202 Y A 0.1373
203 L A 0.0000
204 Q A -0.9323
205 M A 0.0000
206 N A -0.5058
207 S A -0.3280
208 L A 0.0000
209 R A -1.8331
210 A A -0.6186
211 E A -1.8092
212 D A 0.0000
213 T A -0.0145
214 A A 0.0000
215 V A 0.6067
216 Y A 0.0000
217 Y A 0.0000
218 C A 0.0000
219 A A 0.0000
220 R A -0.1844
221 D A 0.0000
222 G A 0.1242
223 I A 0.8844
224 T A 0.3578
225 M A 1.1698
226 V A 0.0000
227 R A -1.9303
228 G A -0.5374
229 V A 1.5665
230 M A 1.3889
231 K A -0.1052
232 D A -0.1695
233 Y A 0.0852
234 F A 0.0000
235 D A -0.1216
236 Y A 0.5959
237 W A 0.2383
238 G A 0.0000
239 Q A -1.2084
240 G A -0.2819
241 T A 0.2431
242 L A 1.4306
243 V A 0.0000
244 T A 0.2052
245 V A 0.0000
246 S A -0.1789
247 S A -0.2376
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Laboratory of Theory of Biopolymers 2018