| Chain sequence(s) |
A: AIQLTQSPSSLSASVGDRVTITCRESQDISSALVWYQQKPHKAPKLLIYDASSLESGVPSRFSGSESGTDFTLTISSLQPEDFATTYCQQFNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVILRESGGGVCQPGRSLRLSCPASGFTFSTYGMHWVRQAPGKGLEWVAVIWDDGSYKYYGDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGITMVRGVMKDYFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:30)
[INFO] Main: Simulation completed successfully. (00:03:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0999 | |
| 2 | I | A | 0.0139 | |
| 3 | Q | A | -1.1245 | |
| 4 | L | A | -0.0722 | |
| 5 | T | A | -0.2550 | |
| 6 | Q | A | -0.1575 | |
| 7 | S | A | -0.1754 | |
| 8 | P | A | -0.1830 | |
| 9 | S | A | -0.2712 | |
| 10 | S | A | -0.2884 | |
| 11 | L | A | 0.1438 | |
| 12 | S | A | -0.3085 | |
| 13 | A | A | -0.0467 | |
| 14 | S | A | -0.0019 | |
| 15 | V | A | 1.2952 | |
| 16 | G | A | -0.3463 | |
| 17 | D | A | -1.2868 | |
| 18 | R | A | -2.0153 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.0671 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.0301 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -1.9120 | |
| 25 | E | A | 0.0000 | |
| 26 | S | A | -0.4113 | |
| 27 | Q | A | -1.5591 | |
| 28 | D | A | -2.0075 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.0400 | |
| 31 | S | A | -0.1040 | |
| 32 | A | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | -0.1243 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -0.9173 | |
| 40 | P | A | -0.4927 | |
| 41 | H | A | -1.3369 | |
| 42 | K | A | -1.8845 | |
| 43 | A | A | -0.3105 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.6736 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.1943 | |
| 50 | D | A | -0.2891 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.2341 | |
| 53 | S | A | -0.0065 | |
| 54 | L | A | 0.4523 | |
| 55 | E | A | -0.3924 | |
| 56 | S | A | -0.3830 | |
| 57 | G | A | -0.5050 | |
| 58 | V | A | 0.0000 | |
| 59 | P | A | -0.1661 | |
| 60 | S | A | -0.2859 | |
| 61 | R | A | -0.3113 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.1687 | |
| 64 | G | A | -0.1571 | |
| 65 | S | A | -0.3795 | |
| 66 | E | A | -0.9168 | |
| 67 | S | A | -0.4543 | |
| 68 | G | A | -0.5089 | |
| 69 | T | A | -0.1992 | |
| 70 | D | A | -0.7235 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.0192 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.0236 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -0.3147 | |
| 77 | S | A | -0.1763 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.5693 | |
| 80 | P | A | -0.5552 | |
| 81 | E | A | -1.6357 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | 0.8303 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.0909 | |
| 86 | T | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | N | A | -0.3443 | |
| 93 | S | A | -0.1383 | |
| 94 | Y | A | 0.3356 | |
| 95 | P | A | 0.0527 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | 0.0289 | |
| 98 | F | A | 0.2080 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -0.4663 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -0.6231 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.0544 | |
| 106 | I | A | -0.1660 | |
| 107 | K | A | -1.7338 | |
| 108 | G | A | -0.8556 | |
| 109 | G | A | -0.6301 | |
| 110 | G | A | -0.6413 | |
| 111 | G | A | -0.5936 | |
| 112 | S | A | -0.3761 | |
| 113 | G | A | -0.5868 | |
| 114 | G | A | -0.6324 | |
| 115 | G | A | -0.6378 | |
| 116 | G | A | -0.5927 | |
| 117 | S | A | -0.3824 | |
| 118 | G | A | -0.5980 | |
| 119 | G | A | -0.6422 | |
| 120 | G | A | -0.6345 | |
| 121 | G | A | -0.5909 | |
| 122 | S | A | -0.5195 | |
| 123 | Q | A | -1.2010 | |
| 124 | V | A | 0.2119 | |
| 125 | I | A | 1.5729 | |
| 126 | L | A | 0.0000 | |
| 127 | R | A | -0.7182 | |
| 128 | E | A | 0.0000 | |
| 129 | S | A | -0.2176 | |
| 130 | G | A | -0.2954 | |
| 131 | G | A | -0.2806 | |
| 132 | G | A | 0.1368 | |
| 133 | V | A | 1.7552 | |
| 134 | C | A | 0.2277 | |
| 135 | Q | A | -0.9910 | |
| 136 | P | A | -0.3872 | |
| 137 | G | A | -0.8140 | |
| 138 | R | A | -1.7494 | |
| 139 | S | A | -0.5122 | |
| 140 | L | A | -0.1230 | |
| 141 | R | A | -1.8782 | |
| 142 | L | A | 0.0000 | |
| 143 | S | A | -0.0172 | |
| 144 | C | A | 0.0000 | |
| 145 | P | A | -0.1161 | |
| 146 | A | A | 0.0000 | |
| 147 | S | A | -0.2947 | |
| 148 | G | A | -0.4193 | |
| 149 | F | A | 0.1989 | |
| 150 | T | A | -0.0167 | |
| 151 | F | A | 0.0000 | |
| 152 | S | A | -0.1234 | |
| 153 | T | A | -0.0226 | |
| 154 | Y | A | 0.2602 | |
| 155 | G | A | 0.0000 | |
| 156 | M | A | 0.0000 | |
| 157 | H | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | R | A | 0.0000 | |
| 161 | Q | A | -0.1546 | |
| 162 | A | A | -0.0630 | |
| 163 | P | A | -0.3401 | |
| 164 | G | A | -0.8393 | |
| 165 | K | A | -1.8202 | |
| 166 | G | A | -0.4816 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -0.7275 | |
| 169 | W | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | V | A | 0.0000 | |
| 173 | I | A | 0.0000 | |
| 174 | W | A | 0.3678 | |
| 175 | D | A | -0.7919 | |
| 176 | D | A | -1.9323 | |
| 177 | G | A | -0.5618 | |
| 178 | S | A | -0.0382 | |
| 179 | Y | A | 0.8710 | |
| 180 | K | A | -0.6983 | |
| 181 | Y | A | 0.3010 | |
| 182 | Y | A | 0.3146 | |
| 183 | G | A | 0.0000 | |
| 184 | D | A | -1.8141 | |
| 185 | S | A | -0.4663 | |
| 186 | V | A | 0.0000 | |
| 187 | K | A | -1.7873 | |
| 188 | G | A | -0.8452 | |
| 189 | R | A | -0.4145 | |
| 190 | F | A | 0.0000 | |
| 191 | T | A | -0.1018 | |
| 192 | I | A | 0.0000 | |
| 193 | S | A | -0.1249 | |
| 194 | R | A | -0.3804 | |
| 195 | D | A | -0.9008 | |
| 196 | N | A | -0.8798 | |
| 197 | S | A | -0.6375 | |
| 198 | K | A | -1.8547 | |
| 199 | N | A | -1.0054 | |
| 200 | T | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | Y | A | 0.1373 | |
| 203 | L | A | 0.0000 | |
| 204 | Q | A | -0.9323 | |
| 205 | M | A | 0.0000 | |
| 206 | N | A | -0.5058 | |
| 207 | S | A | -0.3280 | |
| 208 | L | A | 0.0000 | |
| 209 | R | A | -1.8331 | |
| 210 | A | A | -0.6186 | |
| 211 | E | A | -1.8092 | |
| 212 | D | A | 0.0000 | |
| 213 | T | A | -0.0145 | |
| 214 | A | A | 0.0000 | |
| 215 | V | A | 0.6067 | |
| 216 | Y | A | 0.0000 | |
| 217 | Y | A | 0.0000 | |
| 218 | C | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | R | A | -0.1844 | |
| 221 | D | A | 0.0000 | |
| 222 | G | A | 0.1242 | |
| 223 | I | A | 0.8844 | |
| 224 | T | A | 0.3578 | |
| 225 | M | A | 1.1698 | |
| 226 | V | A | 0.0000 | |
| 227 | R | A | -1.9303 | |
| 228 | G | A | -0.5374 | |
| 229 | V | A | 1.5665 | |
| 230 | M | A | 1.3889 | |
| 231 | K | A | -0.1052 | |
| 232 | D | A | -0.1695 | |
| 233 | Y | A | 0.0852 | |
| 234 | F | A | 0.0000 | |
| 235 | D | A | -0.1216 | |
| 236 | Y | A | 0.5959 | |
| 237 | W | A | 0.2383 | |
| 238 | G | A | 0.0000 | |
| 239 | Q | A | -1.2084 | |
| 240 | G | A | -0.2819 | |
| 241 | T | A | 0.2431 | |
| 242 | L | A | 1.4306 | |
| 243 | V | A | 0.0000 | |
| 244 | T | A | 0.2052 | |
| 245 | V | A | 0.0000 | |
| 246 | S | A | -0.1789 | |
| 247 | S | A | -0.2376 |