Chain sequence(s) |
A: QVQLVQSAEVKKPGSSVKVSCKSSGGTFSDYAINWVRQAPGQGLEWMGRILPIVGVPNYAQKFQGRVTITADKSSSTAYKEVSGLRSEDTAVYYCARRSGINGHGLDVWGQGTTVIVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
C: STCTVPTMNNAKLTSTNDKQKVTFTCDSGYHSLDPNAVCETDKWKYENPCKKMCTVSDYVSELYDKPLYEVNSTMTLSCNGETKYFRCEKNGNTSWNDTVTCP B: DIVMTQSPLSLPVTPGEPASISCRSSQSLLNTNGYNYLEWYLHKPGQSPQLLIYLGSHRASGVPDRFSGSGSGTDFTLKISRAEPEDVGVYYCMQTLQTQGYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG input PDB |
Selected Chain(s) | A,C,B |
Distance of aggregation | 10 Å |
FoldX usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:05) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.6596 | |
2 | V | A | -1.3067 | |
3 | Q | A | -1.1178 | |
4 | L | A | 0.1118 | |
5 | V | A | 1.0953 | |
6 | Q | A | 0.0000 | |
7 | S | A | -0.3714 | |
9 | A | A | -0.4706 | |
10 | E | A | -1.2672 | |
11 | V | A | -0.3764 | |
12 | K | A | -1.5280 | |
13 | K | A | -2.3544 | |
14 | P | A | -2.2508 | |
15 | G | A | -1.6052 | |
16 | S | A | -1.1433 | |
17 | S | A | -0.9523 | |
18 | V | A | -0.8515 | |
19 | K | A | -1.5762 | |
20 | V | A | -0.4551 | |
21 | S | A | -0.1600 | |
22 | C | A | 0.0000 | |
23 | K | A | -0.1358 | |
24 | S | A | 0.0000 | |
25 | S | A | -0.8218 | |
26 | G | A | -1.3364 | |
27 | G | A | -1.1084 | |
28 | T | A | -0.4211 | |
29 | F | A | -0.3259 | |
30 | S | A | -0.0720 | |
31 | D | A | 0.2123 | |
32 | Y | A | 0.0916 | |
33 | A | A | 0.0000 | |
34 | I | A | 0.0000 | |
35 | N | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | V | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -0.6999 | |
40 | A | A | -1.0049 | |
41 | P | A | -1.1042 | |
42 | G | A | -1.2513 | |
43 | Q | A | -1.7864 | |
44 | G | A | -1.1816 | |
45 | L | A | -0.6233 | |
46 | E | A | -0.5809 | |
47 | W | A | 0.0000 | |
48 | M | A | 0.0000 | |
49 | G | A | 0.0000 | |
50 | R | A | -0.0732 | |
51 | I | A | 0.0000 | |
52 | L | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | I | A | 1.7292 | |
55 | V | A | 2.5086 | |
56 | G | A | 1.4351 | |
57 | V | A | 2.0901 | |
58 | P | A | 0.7690 | |
59 | N | A | -0.2388 | |
60 | Y | A | -0.8536 | |
61 | A | A | -1.6102 | |
62 | Q | A | -2.7767 | |
63 | K | A | -2.7934 | |
64 | F | A | 0.0000 | |
65 | Q | A | -2.6002 | |
66 | G | A | -1.8043 | |
67 | R | A | -1.6681 | |
68 | V | A | 0.0000 | |
69 | T | A | -0.7206 | |
70 | I | A | 0.0000 | |
71 | T | A | 0.0419 | |
72 | A | A | -0.2677 | |
73 | D | A | -1.1481 | |
74 | K | A | -1.4108 | |
75 | S | A | -0.9684 | |
76 | S | A | -0.8318 | |
77 | S | A | -0.9355 | |
78 | T | A | 0.0000 | |
79 | A | A | 0.0000 | |
80 | Y | A | -0.2322 | |
81 | K | A | 0.0000 | |
82 | E | A | -1.0876 | |
83 | V | A | -0.7618 | |
84 | S | A | -0.9280 | |
85 | G | A | -1.0890 | |
86 | L | A | -1.9215 | |
87 | R | A | -2.8565 | |
88 | S | A | -2.3019 | |
89 | E | A | -2.5229 | |
90 | D | A | -1.5042 | |
91 | T | A | -0.7765 | |
92 | A | A | 0.0000 | |
93 | V | A | 0.2128 | |
94 | Y | A | 0.0945 | |
95 | Y | A | -0.0431 | |
96 | C | A | 0.0000 | |
97 | A | A | 0.0000 | |
98 | R | A | 0.0000 | |
99 | R | A | 0.0000 | |
100 | S | A | 0.0000 | |
101 | G | A | 0.4304 | |
102 | I | A | 1.6726 | |
103 | N | A | 0.0000 | |
104 | G | A | 0.0000 | |
105 | H | A | 0.0229 | |
106 | G | A | 0.0000 | |
107 | L | A | -0.2025 | |
108 | D | A | -0.3718 | |
109 | V | A | -0.4405 | |
110 | W | A | -0.4256 | |
111 | G | A | 0.0000 | |
112 | Q | A | -0.9807 | |
113 | G | A | -0.5521 | |
114 | T | A | -0.3777 | |
115 | T | A | 0.0108 | |
116 | V | A | 0.1622 | |
117 | I | A | -0.4267 | |
118 | V | A | 0.0000 | |
119 | S | A | -1.2740 | |
120 | S | A | -0.8979 | |
121 | A | A | -0.6508 | |
122 | S | A | -0.4829 | |
123 | T | A | -0.8050 | |
124 | K | A | -1.3068 | |
125 | G | A | -1.4824 | |
126 | P | A | -0.5665 | |
127 | S | A | -0.2239 | |
128 | V | A | -0.0182 | |
129 | F | A | 0.0000 | |
130 | P | A | -0.7078 | |
131 | L | A | 0.0000 | |
132 | A | A | -0.5853 | |
133 | P | A | 0.0000 | |
134 | S | A | -0.2566 | |
135 | S | A | -0.3694 | |
141 | G | A | -0.6333 | |
142 | T | A | -0.4875 | |
143 | A | A | -0.3511 | |
144 | A | A | 0.0000 | |
145 | L | A | 0.0000 | |
146 | G | A | 0.0000 | |
147 | C | A | 0.0000 | |
148 | L | A | 0.1934 | |
149 | V | A | 0.0000 | |
150 | K | A | -0.2403 | |
151 | D | A | -0.5755 | |
152 | Y | A | 0.0000 | |
153 | F | A | -0.4355 | |
154 | P | A | -0.7986 | |
155 | E | A | -1.0085 | |
156 | P | A | -1.0285 | |
157 | V | A | -0.8586 | |
158 | T | A | -0.5289 | |
159 | V | A | -0.0978 | |
160 | S | A | -0.2497 | |
161 | W | A | 0.0000 | |
162 | N | A | -0.8803 | |
163 | S | A | -0.5650 | |
164 | G | A | -0.6080 | |
165 | A | A | -0.2119 | |
166 | L | A | -0.0284 | |
167 | T | A | -0.1839 | |
168 | S | A | -0.1751 | |
169 | G | A | -0.0738 | |
170 | V | A | 0.2665 | |
171 | H | A | -0.0899 | |
172 | T | A | 0.0262 | |
173 | F | A | 0.0000 | |
174 | P | A | -0.2418 | |
175 | A | A | 0.3582 | |
176 | V | A | 0.6387 | |
177 | L | A | 1.2945 | |
178 | Q | A | 0.2446 | |
179 | S | A | -0.0443 | |
180 | S | A | -0.1869 | |
181 | G | A | 0.0690 | |
182 | L | A | 0.0875 | |
183 | Y | A | 0.3376 | |
184 | S | A | 0.2666 | |
185 | L | A | 0.4620 | |
186 | S | A | 0.1431 | |
187 | S | A | 0.0000 | |
188 | V | A | 0.0000 | |
189 | V | A | 0.0000 | |
190 | T | A | -0.1123 | |
191 | V | A | 0.0000 | |
192 | P | A | -0.5729 | |
193 | S | A | -0.6543 | |
194 | S | A | -0.7893 | |
195 | S | A | -0.7643 | |
196 | L | A | -0.8951 | |
197 | G | A | -0.9440 | |
198 | T | A | -0.9297 | |
199 | Q | A | -1.3536 | |
200 | T | A | -1.2364 | |
201 | Y | A | -0.9458 | |
202 | I | A | -1.2587 | |
203 | C | A | 0.0000 | |
204 | N | A | -1.2505 | |
205 | V | A | 0.0000 | |
206 | N | A | -1.8022 | |
207 | H | A | 0.0000 | |
208 | K | A | -2.8268 | |
209 | P | A | -1.7232 | |
210 | S | A | -1.8320 | |
211 | N | A | -2.4809 | |
212 | T | A | -1.8509 | |
213 | K | A | -2.2625 | |
214 | V | A | -0.7273 | |
215 | D | A | -2.0304 | |
216 | K | A | -2.0502 | |
217 | R | A | -2.7495 | |
218 | V | A | 0.0000 | |
219 | E | A | -2.3616 | |
220 | P | A | -1.5668 | |
1 | D | B | -1.7049 | |
2 | I | B | 0.0000 | |
3 | V | B | 0.8866 | |
4 | M | B | 0.0000 | |
5 | T | B | -0.6334 | |
6 | Q | B | 0.0000 | |
7 | S | B | -0.2325 | |
8 | P | B | 0.3585 | |
9 | L | B | 1.1386 | |
10 | S | B | 0.3174 | |
11 | L | B | 0.1796 | |
12 | P | B | -0.4664 | |
13 | V | B | -0.6066 | |
14 | T | B | -1.2026 | |
15 | P | B | -1.3840 | |
16 | G | B | -1.7432 | |
17 | E | B | -2.2923 | |
18 | P | B | -1.9863 | |
19 | A | B | -1.0596 | |
20 | S | B | -0.6080 | |
21 | I | B | 0.0000 | |
22 | S | B | -0.9118 | |
23 | C | B | 0.0000 | |
24 | R | B | -2.0648 | |
25 | S | B | -0.8818 | |
26 | S | B | -0.5418 | |
27 | Q | B | -1.0403 | |
28 | S | B | -0.7672 | |
29 | L | B | 0.0000 | |
30 | L | B | 0.3314 | |
31 | N | B | -0.4598 | |
32 | T | B | -0.6756 | |
33 | N | B | -0.7625 | |
34 | G | B | -0.4364 | |
35 | Y | B | 0.0000 | |
36 | N | B | -0.0877 | |
37 | Y | B | 0.1152 | |
38 | L | B | 0.0000 | |
39 | E | B | 0.0000 | |
40 | W | B | 0.0000 | |
41 | Y | B | 0.0000 | |
42 | L | B | -0.3791 | |
43 | H | B | -0.9170 | |
44 | K | B | -1.4280 | |
45 | P | B | -0.9913 | |
46 | G | B | -1.4439 | |
47 | Q | B | -1.9956 | |
48 | S | B | -1.4462 | |
49 | P | B | 0.0000 | |
50 | Q | B | -1.4621 | |
51 | L | B | 0.0000 | |
52 | L | B | 0.0000 | |
53 | I | B | 0.0000 | |
54 | Y | B | 0.0000 | |
55 | L | B | 0.0000 | |
56 | G | B | 0.0000 | |
57 | S | B | -0.5711 | |
58 | H | B | 0.0000 | |
59 | R | B | -0.7140 | |
60 | A | B | 0.0000 | |
61 | S | B | -0.1828 | |
62 | G | B | -0.6701 | |
63 | V | B | -0.5548 | |
64 | P | B | -1.1061 | |
65 | D | B | -2.4713 | |
66 | R | B | -2.0175 | |
67 | F | B | 0.0000 | |
68 | S | B | -0.9181 | |
69 | G | B | -0.6102 | |
70 | S | B | -0.7646 | |
71 | G | B | -1.0726 | |
72 | S | B | -0.9564 | |
73 | G | B | -0.8873 | |
74 | T | B | -1.5107 | |
75 | D | B | -2.2242 | |
76 | F | B | 0.0000 | |
77 | T | B | -0.9785 | |
78 | L | B | 0.0000 | |
79 | K | B | -1.2379 | |
80 | I | B | 0.0000 | |
81 | S | B | -2.1245 | |
82 | R | B | -3.1275 | |
83 | A | B | -2.0725 | |
84 | E | B | -1.8530 | |
85 | P | B | -1.3233 | |
86 | E | B | -2.0615 | |
87 | D | B | 0.0000 | |
88 | V | B | -0.4287 | |
89 | G | B | 0.0000 | |
90 | V | B | -0.0171 | |
91 | Y | B | 0.0000 | |
92 | Y | B | 0.0000 | |
93 | C | B | 0.0000 | |
94 | M | B | 0.0000 | |
95 | Q | B | 0.0000 | |
96 | T | B | -0.0828 | |
97 | L | B | -0.0035 | |
98 | Q | B | -0.8703 | |
99 | T | B | -0.7069 | |
100 | Q | B | -1.2549 | |
101 | G | B | -0.7870 | |
102 | Y | B | -0.1505 | |
103 | T | B | 0.1778 | |
104 | F | B | 0.0000 | |
105 | G | B | -0.2969 | |
106 | Q | B | -0.5221 | |
107 | G | B | -0.4542 | |
108 | T | B | 0.0000 | |
109 | K | B | -0.2013 | |
110 | L | B | 0.0000 | |
111 | E | B | -0.7147 | |
112 | I | B | -0.5813 | |
113 | K | B | -1.0724 | |
114 | R | B | -0.7422 | |
115 | T | B | 0.2190 | |
116 | V | B | 1.1784 | |
117 | A | B | 0.4229 | |
118 | A | B | 0.0299 | |
119 | P | B | 0.0000 | |
120 | S | B | -0.0926 | |
121 | V | B | 0.2275 | |
122 | F | B | 0.3770 | |
123 | I | B | 0.1411 | |
124 | F | B | 0.0000 | |
125 | P | B | -0.5846 | |
126 | P | B | -0.5934 | |
127 | S | B | -1.4051 | |
128 | D | B | -2.5760 | |
129 | E | B | -2.2995 | |
130 | Q | B | 0.0000 | |
131 | L | B | -1.8490 | |
132 | K | B | -2.6121 | |
133 | S | B | -1.6171 | |
134 | G | B | -1.1572 | |
135 | T | B | -0.8705 | |
136 | A | B | 0.0000 | |
137 | S | B | -0.0877 | |
138 | V | B | 0.0000 | |
139 | V | B | 0.0000 | |
140 | C | B | 0.0000 | |
141 | L | B | 0.0000 | |
142 | L | B | 0.0000 | |
143 | N | B | -0.5134 | |
144 | N | B | -1.0434 | |
145 | F | B | 0.0000 | |
146 | Y | B | -0.8878 | |
147 | P | B | -1.4746 | |
148 | R | B | -2.8874 | |
149 | E | B | -3.2220 | |
150 | A | B | -2.2793 | |
151 | K | B | -2.2476 | |
152 | V | B | -1.0275 | |
153 | Q | B | -0.5751 | |
154 | W | B | 0.0000 | |
155 | K | B | -0.7354 | |
156 | V | B | 0.0000 | |
157 | D | B | -2.0575 | |
158 | N | B | -1.4775 | |
159 | A | B | -0.3067 | |
160 | L | B | 0.7128 | |
161 | Q | B | -0.2190 | |
162 | S | B | -0.5502 | |
163 | G | B | -1.0448 | |
164 | N | B | -1.1056 | |
165 | S | B | -1.4339 | |
166 | Q | B | -1.6589 | |
167 | E | B | -2.0352 | |
168 | S | B | -0.8482 | |
169 | V | B | -0.7477 | |
170 | T | B | -0.9801 | |
171 | E | B | -2.2965 | |
172 | Q | B | -1.9588 | |
173 | D | B | -2.4350 | |
174 | S | B | -2.0611 | |
175 | K | B | -2.5901 | |
176 | D | B | -2.3310 | |
177 | S | B | 0.0000 | |
178 | T | B | 0.0000 | |
179 | Y | B | -1.3655 | |
180 | S | B | 0.0000 | |
181 | L | B | 0.0000 | |
182 | S | B | 0.0000 | |
183 | S | B | 0.0000 | |
184 | T | B | -0.8754 | |
185 | L | B | 0.0000 | |
186 | T | B | -0.3890 | |
187 | L | B | -0.3755 | |
188 | S | B | -0.7653 | |
189 | K | B | -1.6799 | |
190 | A | B | -1.3681 | |
191 | D | B | -1.7966 | |
192 | Y | B | 0.0000 | |
193 | E | B | -2.7446 | |
194 | K | B | -3.0427 | |
195 | H | B | -2.8350 | |
196 | K | B | -2.9850 | |
197 | V | B | -1.7843 | |
198 | Y | B | 0.0000 | |
199 | A | B | 0.0000 | |
200 | C | B | 0.0000 | |
201 | E | B | -0.9023 | |
202 | V | B | 0.0000 | |
203 | T | B | -1.1449 | |
204 | H | B | 0.0000 | |
205 | Q | B | -1.6996 | |
206 | G | B | -0.2221 | |
207 | L | B | -0.2572 | |
208 | S | B | -0.4385 | |
209 | S | B | -0.3403 | |
210 | P | B | -0.4589 | |
211 | V | B | 0.0830 | |
212 | T | B | -0.6018 | |
213 | K | B | -1.0569 | |
214 | S | B | -0.8524 | |
215 | F | B | -0.9808 | |
216 | N | B | -2.1498 | |
217 | R | B | -2.1358 | |
218 | G | B | -1.3351 | |
19 | S | C | -1.2943 | |
20 | T | C | -1.7065 | |
21 | C | C | -1.1717 | |
22 | T | C | 0.1394 | |
23 | V | C | 1.6134 | |
24 | P | C | 0.6051 | |
25 | T | C | -0.2179 | |
26 | M | C | 0.0000 | |
27 | N | C | -2.0188 | |
28 | N | C | -2.0569 | |
29 | A | C | -1.7420 | |
30 | K | C | -1.8719 | |
31 | L | C | -0.2288 | |
32 | T | C | -0.5022 | |
33 | S | C | -0.0579 | |
34 | T | C | 0.2272 | |
39 | N | C | -1.9896 | |
40 | D | C | -2.8585 | |
41 | K | C | -3.0733 | |
42 | Q | C | -2.4828 | |
43 | K | C | -2.2981 | |
44 | V | C | -0.8063 | |
45 | T | C | -0.7351 | |
46 | F | C | 0.0000 | |
47 | T | C | -1.1118 | |
48 | C | C | 0.0000 | |
49 | D | C | -1.6524 | |
50 | S | C | -0.9712 | |
51 | G | C | -0.8629 | |
52 | Y | C | -1.0701 | |
53 | H | C | -1.0022 | |
54 | S | C | 0.0000 | |
55 | L | C | 0.0275 | |
56 | D | C | -1.5638 | |
57 | P | C | -1.0352 | |
58 | N | C | -1.1011 | |
59 | A | C | 0.0000 | |
60 | V | C | -1.6542 | |
61 | C | C | 0.0000 | |
62 | E | C | -2.3634 | |
63 | T | C | -1.9473 | |
64 | D | C | -3.0464 | |
65 | K | C | -2.2642 | |
66 | W | C | 0.0000 | |
67 | K | C | -1.6943 | |
68 | Y | C | -0.8708 | |
69 | E | C | -1.6208 | |
70 | N | C | -1.1481 | |
71 | P | C | -1.1145 | |
72 | C | C | 0.0000 | |
73 | K | C | -1.6398 | |
74 | K | C | -1.6948 | |
75 | M | C | 0.0000 | |
76 | C | C | 0.0000 | |
77 | T | C | -0.1169 | |
78 | V | C | 0.0000 | |
79 | S | C | 0.0000 | |
80 | D | C | -0.4612 | |
81 | Y | C | 0.5898 | |
82 | V | C | 0.0000 | |
83 | S | C | -0.6370 | |
84 | E | C | -0.6956 | |
85 | L | C | 1.0239 | |
86 | Y | C | 0.4069 | |
87 | D | C | -1.7647 | |
88 | K | C | -1.4815 | |
89 | P | C | 0.0000 | |
90 | L | C | 0.0000 | |
91 | Y | C | -0.9546 | |
92 | E | C | -1.9155 | |
93 | V | C | -1.7615 | |
94 | N | C | -2.2751 | |
95 | S | C | -1.4713 | |
96 | T | C | -1.0584 | |
97 | M | C | 0.0000 | |
98 | T | C | 0.2102 | |
99 | L | C | -0.0348 | |
100 | S | C | -0.7324 | |
101 | C | C | -0.9491 | |
102 | N | C | -1.7312 | |
103 | G | C | -1.6292 | |
104 | E | C | -1.9540 | |
105 | T | C | -0.8445 | |
106 | K | C | -0.2225 | |
107 | Y | C | 0.3590 | |
108 | F | C | 0.0000 | |
109 | R | C | -2.4647 | |
110 | C | C | 0.0000 | |
112 | E | C | -3.8194 | |
113 | K | C | -3.9699 | |
114 | N | C | -3.1637 | |
115 | G | C | -2.8393 | |
116 | N | C | -3.3260 | |
117 | T | C | -2.6948 | |
118 | S | C | -2.3187 | |
119 | W | C | -2.1082 | |
120 | N | C | -3.0568 | |
121 | D | C | -2.4110 | |
122 | T | C | -0.9735 | |
123 | V | C | -0.3143 | |
124 | T | C | -0.0891 | |
125 | C | C | 0.0355 | |
126 | P | C | -0.2918 |