| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDHYVITYGETGVGWVPGQTFTVPGSKSTATISGLKPGVDYTITVYAWNASIFSYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7244 | |
| 2 | S | A | 0.4546 | |
| 3 | D | A | 0.3334 | |
| 4 | V | A | -0.0602 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5515 | |
| 7 | D | A | -3.5848 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1813 | |
| 10 | V | A | 0.1121 | |
| 11 | V | A | 1.5524 | |
| 12 | A | A | 0.9045 | |
| 13 | A | A | 0.3330 | |
| 14 | T | A | -0.3435 | |
| 15 | P | A | -1.1219 | |
| 16 | T | A | -1.0024 | |
| 17 | S | A | -0.5314 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7567 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1933 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3634 | |
| 24 | A | A | -1.7424 | |
| 25 | P | A | -0.5064 | |
| 26 | A | A | 0.1962 | |
| 27 | V | A | 0.5275 | |
| 28 | T | A | -0.3049 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -1.6967 | |
| 31 | H | A | -1.2244 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.5196 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.2313 | |
| 36 | Y | A | -0.4762 | |
| 37 | G | A | -0.3593 | |
| 38 | E | A | -0.8337 | |
| 39 | T | A | -0.6254 | |
| 40 | G | A | 0.1701 | |
| 41 | V | A | 1.4183 | |
| 42 | G | A | 0.8711 | |
| 43 | W | A | 1.5444 | |
| 44 | V | A | 1.2588 | |
| 45 | P | A | 0.1160 | |
| 46 | G | A | -0.1243 | |
| 47 | Q | A | -1.1245 | |
| 48 | T | A | -0.4009 | |
| 49 | F | A | 0.2447 | |
| 50 | T | A | 0.2085 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1756 | |
| 53 | G | A | -1.4416 | |
| 54 | S | A | -1.3982 | |
| 55 | K | A | -2.0272 | |
| 56 | S | A | -1.4231 | |
| 57 | T | A | -0.7391 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2399 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.7849 | |
| 62 | G | A | -1.1577 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3912 | |
| 65 | P | A | -1.6578 | |
| 66 | G | A | -1.4412 | |
| 67 | V | A | -1.4441 | |
| 68 | D | A | -1.8976 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.8372 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.0089 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.7699 | |
| 75 | A | A | 0.0000 | |
| 76 | W | A | 0.5943 | |
| 77 | N | A | 0.0000 | |
| 78 | A | A | 0.7266 | |
| 79 | S | A | 0.7018 | |
| 80 | I | A | 1.9167 | |
| 81 | F | A | 2.5809 | |
| 82 | S | A | 1.7478 | |
| 83 | Y | A | 1.8304 | |
| 84 | S | A | 0.0000 | |
| 85 | P | A | 0.2741 | |
| 86 | I | A | -0.0617 | |
| 87 | S | A | -0.6700 | |
| 88 | I | A | -0.7301 | |
| 89 | N | A | -1.7372 | |
| 90 | Y | A | -1.4557 | |
| 91 | R | A | -2.5222 | |
| 92 | T | A | -1.4993 |