Project name: IVKGH4

Status: done

Started: 2026-02-10 05:31:46
Settings
Chain sequence(s) A: IVKGH
C: IVKGH
B: IVKGH
D: IVKGH
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:49)
Show buried residues

Minimal score value
-2.2066
Maximal score value
3.1902
Average score
0.2266
Total score value
4.5329

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 3.1902
2 V A 2.8807
3 K A -0.8875
4 G A 0.0000
5 H A -1.6879
1 I B 3.1559
2 V B 2.6971
3 K B -0.1632
4 G B -0.3643
5 H B -1.3763
1 I C 2.6388
2 V C 1.2790
3 K C -1.6515
4 G C -1.5594
5 H C -2.2066
1 I D 1.9758
2 V D 1.3785
3 K D -1.8794
4 G D -1.0027
5 H D -1.8843
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Laboratory of Theory of Biopolymers 2018