| Chain sequence(s) |
A: IVKGH
C: IVKGH B: IVKGH D: IVKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:48)
[INFO] Main: Simulation completed successfully. (00:02:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 3.1902 | |
| 2 | V | A | 2.8807 | |
| 3 | K | A | -0.8875 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -1.6879 | |
| 1 | I | B | 3.1559 | |
| 2 | V | B | 2.6971 | |
| 3 | K | B | -0.1632 | |
| 4 | G | B | -0.3643 | |
| 5 | H | B | -1.3763 | |
| 1 | I | C | 2.6388 | |
| 2 | V | C | 1.2790 | |
| 3 | K | C | -1.6515 | |
| 4 | G | C | -1.5594 | |
| 5 | H | C | -2.2066 | |
| 1 | I | D | 1.9758 | |
| 2 | V | D | 1.3785 | |
| 3 | K | D | -1.8794 | |
| 4 | G | D | -1.0027 | |
| 5 | H | D | -1.8843 |