Project name: query_structure

Status: done

Started: 2026-03-17 00:24:12
Settings
Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVARQLWDYYYDTHYYWGQGTQVTVSSLE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:44)
Show buried residues

Minimal score value
-3.2649
Maximal score value
1.8319
Average score
-0.668
Total score value
-82.837

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.2960
2 V A -0.5701
3 Q A -1.5348
4 L A 0.0000
5 Q A -1.6838
6 E A 0.0000
7 S A -1.1026
8 G A -1.0242
9 G A -0.8169
10 G A -0.0604
11 L A 1.0818
12 V A 0.2074
13 Q A -0.9582
14 A A -1.2805
15 G A -1.1736
16 G A -0.9025
17 S A -1.3078
18 L A -1.0022
19 R A -2.2713
20 L A 0.0000
21 S A -0.9103
22 C A 0.0000
23 A A -1.1097
24 A A -0.6621
25 S A -0.6875
26 G A 0.0625
27 Y A 0.6143
28 I A 0.0000
29 S A -0.9834
30 D A -0.9539
31 A A 0.0000
32 Y A -0.3220
33 Y A -0.1907
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A -0.0019
38 R A 0.0000
39 Q A -1.8501
40 A A -1.8774
41 P A -1.3364
42 G A -1.8325
43 K A -2.9982
44 E A -3.2649
45 R A -2.4038
46 E A -1.1667
47 F A 0.1849
48 V A 0.0000
49 A A 0.0000
50 T A 0.3385
51 I A 0.0000
52 T A 0.0000
53 H A -1.4993
54 G A -1.0951
55 T A -1.0150
56 N A -1.3031
57 T A -0.1383
58 Y A 0.7064
59 Y A -0.1439
60 A A -0.9050
61 D A -2.2411
62 S A -1.7554
63 V A 0.0000
64 K A -2.4670
65 G A -1.7753
66 R A -1.5826
67 F A 0.0000
68 T A -0.8400
69 I A 0.0000
70 S A -0.6984
71 R A -1.2441
72 D A -1.8303
73 N A -2.0957
74 A A -1.4397
75 K A -2.2039
76 N A -1.4342
77 T A 0.0000
78 V A 0.0000
79 Y A -0.7474
80 L A 0.0000
81 Q A -1.5864
82 M A 0.0000
83 N A -1.4619
84 S A -1.2763
85 L A 0.0000
86 K A -2.5490
87 P A -1.8468
88 E A -2.4676
89 D A 0.0000
90 T A -0.9850
91 A A 0.0000
92 V A -0.6199
93 Y A 0.0000
94 Y A -0.4098
95 C A 0.0000
96 A A 0.0000
97 V A 0.0000
98 A A 0.0000
99 R A -0.6604
100 Q A -0.6228
101 L A 0.6050
102 W A 1.1073
103 D A 0.0433
104 Y A 1.6157
105 Y A 1.8319
106 Y A 0.9575
107 D A -0.9322
108 T A -0.8418
109 H A -1.0493
110 Y A 0.0032
111 Y A 0.2033
112 W A 0.1994
113 G A -0.6965
114 Q A -1.5166
115 G A -1.0050
116 T A 0.0000
117 Q A -1.1857
118 V A 0.0000
119 T A -0.3082
120 V A 0.0000
121 S A -0.5960
122 S A -0.8037
123 L A 0.0795
124 E A -1.2668
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Laboratory of Theory of Biopolymers 2018