| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVARQLWDYYYDTHYYWGQGTQVTVSSLE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.2960 | |
| 2 | V | A | -0.5701 | |
| 3 | Q | A | -1.5348 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.6838 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.1026 | |
| 8 | G | A | -1.0242 | |
| 9 | G | A | -0.8169 | |
| 10 | G | A | -0.0604 | |
| 11 | L | A | 1.0818 | |
| 12 | V | A | 0.2074 | |
| 13 | Q | A | -0.9582 | |
| 14 | A | A | -1.2805 | |
| 15 | G | A | -1.1736 | |
| 16 | G | A | -0.9025 | |
| 17 | S | A | -1.3078 | |
| 18 | L | A | -1.0022 | |
| 19 | R | A | -2.2713 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.9103 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1097 | |
| 24 | A | A | -0.6621 | |
| 25 | S | A | -0.6875 | |
| 26 | G | A | 0.0625 | |
| 27 | Y | A | 0.6143 | |
| 28 | I | A | 0.0000 | |
| 29 | S | A | -0.9834 | |
| 30 | D | A | -0.9539 | |
| 31 | A | A | 0.0000 | |
| 32 | Y | A | -0.3220 | |
| 33 | Y | A | -0.1907 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.0019 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.8501 | |
| 40 | A | A | -1.8774 | |
| 41 | P | A | -1.3364 | |
| 42 | G | A | -1.8325 | |
| 43 | K | A | -2.9982 | |
| 44 | E | A | -3.2649 | |
| 45 | R | A | -2.4038 | |
| 46 | E | A | -1.1667 | |
| 47 | F | A | 0.1849 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | 0.3385 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | H | A | -1.4993 | |
| 54 | G | A | -1.0951 | |
| 55 | T | A | -1.0150 | |
| 56 | N | A | -1.3031 | |
| 57 | T | A | -0.1383 | |
| 58 | Y | A | 0.7064 | |
| 59 | Y | A | -0.1439 | |
| 60 | A | A | -0.9050 | |
| 61 | D | A | -2.2411 | |
| 62 | S | A | -1.7554 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.4670 | |
| 65 | G | A | -1.7753 | |
| 66 | R | A | -1.5826 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.8400 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6984 | |
| 71 | R | A | -1.2441 | |
| 72 | D | A | -1.8303 | |
| 73 | N | A | -2.0957 | |
| 74 | A | A | -1.4397 | |
| 75 | K | A | -2.2039 | |
| 76 | N | A | -1.4342 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.7474 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.5864 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4619 | |
| 84 | S | A | -1.2763 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.5490 | |
| 87 | P | A | -1.8468 | |
| 88 | E | A | -2.4676 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9850 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.6199 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.4098 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | -0.6604 | |
| 100 | Q | A | -0.6228 | |
| 101 | L | A | 0.6050 | |
| 102 | W | A | 1.1073 | |
| 103 | D | A | 0.0433 | |
| 104 | Y | A | 1.6157 | |
| 105 | Y | A | 1.8319 | |
| 106 | Y | A | 0.9575 | |
| 107 | D | A | -0.9322 | |
| 108 | T | A | -0.8418 | |
| 109 | H | A | -1.0493 | |
| 110 | Y | A | 0.0032 | |
| 111 | Y | A | 0.2033 | |
| 112 | W | A | 0.1994 | |
| 113 | G | A | -0.6965 | |
| 114 | Q | A | -1.5166 | |
| 115 | G | A | -1.0050 | |
| 116 | T | A | 0.0000 | |
| 117 | Q | A | -1.1857 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | -0.3082 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.5960 | |
| 122 | S | A | -0.8037 | |
| 123 | L | A | 0.0795 | |
| 124 | E | A | -1.2668 |