| Chain sequence(s) |
A: KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGTFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:19)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.3363 | |
| 2 | V | A | -0.2616 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -2.0984 | |
| 5 | R | A | -1.7710 | |
| 6 | C | A | -1.3381 | |
| 7 | E | A | -1.6357 | |
| 8 | L | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | R | A | -1.8653 | |
| 11 | T | A | -1.3532 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -2.5805 | |
| 14 | R | A | -2.6269 | |
| 15 | L | A | -1.3624 | |
| 16 | G | A | -1.6650 | |
| 17 | M | A | 0.0000 | |
| 18 | D | A | -2.8570 | |
| 19 | G | A | -2.0519 | |
| 20 | Y | A | -2.0197 | |
| 21 | R | A | -2.7134 | |
| 22 | G | A | -1.7043 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -1.3426 | |
| 25 | L | A | 0.0000 | |
| 26 | A | A | -1.2164 | |
| 27 | N | A | -1.1384 | |
| 28 | W | A | 0.0000 | |
| 29 | M | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -1.1055 | |
| 34 | W | A | -0.3284 | |
| 35 | E | A | -0.4245 | |
| 36 | S | A | -0.7335 | |
| 37 | G | A | -0.6553 | |
| 38 | Y | A | 0.0000 | |
| 39 | N | A | -1.4132 | |
| 40 | T | A | 0.0000 | |
| 41 | R | A | -2.4133 | |
| 42 | A | A | -1.2644 | |
| 43 | T | A | -0.7433 | |
| 44 | N | A | -0.4221 | |
| 45 | Y | A | 0.0699 | |
| 46 | N | A | -1.0382 | |
| 47 | A | A | -1.1118 | |
| 48 | G | A | -1.5504 | |
| 49 | D | A | -2.5392 | |
| 50 | R | A | -2.8814 | |
| 51 | S | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | D | A | -0.4690 | |
| 54 | Y | A | -0.5428 | |
| 55 | G | A | 0.0000 | |
| 56 | T | A | 0.0000 | |
| 57 | F | A | 0.0000 | |
| 58 | Q | A | -0.6520 | |
| 59 | I | A | 0.0000 | |
| 60 | N | A | -0.3427 | |
| 61 | S | A | 0.0000 | |
| 62 | R | A | -0.6730 | |
| 63 | Y | A | 1.2460 | |
| 64 | W | A | 0.3145 | |
| 65 | C | A | 0.0000 | |
| 66 | N | A | -1.2304 | |
| 67 | D | A | -1.6161 | |
| 68 | G | A | -1.8423 | |
| 69 | K | A | -2.6438 | |
| 70 | T | A | 0.0000 | |
| 71 | P | A | -1.4282 | |
| 72 | G | A | -0.4070 | |
| 73 | A | A | -0.0328 | |
| 74 | V | A | 1.3107 | |
| 75 | N | A | 0.1630 | |
| 76 | A | A | 0.1847 | |
| 77 | C | A | -0.3852 | |
| 78 | H | A | -0.7138 | |
| 79 | L | A | -0.6867 | |
| 80 | S | A | -0.8066 | |
| 81 | C | A | 0.0000 | |
| 82 | S | A | -0.6262 | |
| 83 | A | A | -0.7651 | |
| 84 | L | A | 0.0000 | |
| 85 | L | A | -1.7336 | |
| 86 | Q | A | -2.6154 | |
| 87 | D | A | -3.2707 | |
| 88 | N | A | -2.6418 | |
| 89 | I | A | 0.0000 | |
| 90 | A | A | -0.8706 | |
| 91 | D | A | -0.8847 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | A | A | -0.4687 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | K | A | -1.6434 | |
| 98 | R | A | -1.8841 | |
| 99 | V | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | R | A | -3.2102 | |
| 102 | D | A | -2.5238 | |
| 103 | P | A | -1.7132 | |
| 104 | Q | A | -2.0663 | |
| 105 | G | A | -2.3250 | |
| 106 | I | A | -1.6697 | |
| 107 | R | A | -2.2304 | |
| 108 | A | A | -1.0239 | |
| 109 | W | A | 0.0000 | |
| 110 | V | A | 0.4323 | |
| 111 | A | A | -0.4029 | |
| 112 | W | A | -1.2908 | |
| 113 | R | A | -2.5532 | |
| 114 | N | A | -1.8397 | |
| 115 | R | A | -1.8159 | |
| 116 | C | A | 0.0000 | |
| 117 | Q | A | -2.6631 | |
| 118 | N | A | -3.0609 | |
| 119 | R | A | -4.0142 | |
| 120 | D | A | -3.6824 | |
| 121 | V | A | -2.9205 | |
| 122 | R | A | -3.3771 | |
| 123 | Q | A | -2.6986 | |
| 124 | Y | A | -1.7203 | |
| 125 | V | A | -1.2987 | |
| 126 | Q | A | -2.0772 | |
| 127 | G | A | -1.3183 | |
| 128 | C | A | 0.0000 | |
| 129 | G | A | -0.4865 | |
| 130 | V | A | -0.2992 |