| Chain sequence(s) |
H: QVQLVESGGGPVEAGGSLRLSCAASGRSFSNSVMAWFRQAPGKEREFLSVLNWSSGRTSIADSVKGRFTMSRDPAKITVYLQMNGLKPEDTAVYYCAASNRGSLYTLDNQNRYEDWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | VA126H,TR122H |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.63849 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:00:26)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:21)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:57)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7679 | |
| 2 | V | H | -1.4521 | |
| 3 | Q | H | -1.3353 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4719 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6768 | |
| 8 | G | H | -1.0700 | |
| 9 | G | H | -1.0702 | |
| 11 | G | H | -0.7907 | |
| 12 | P | H | -0.7473 | |
| 13 | V | H | -1.0808 | |
| 14 | E | H | -2.2152 | |
| 15 | A | H | -1.8387 | |
| 16 | G | H | -1.4579 | |
| 17 | G | H | -1.2826 | |
| 18 | S | H | -1.2357 | |
| 19 | L | H | -0.9083 | |
| 20 | R | H | -1.7242 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4832 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0069 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0404 | |
| 27 | G | H | -1.6385 | |
| 28 | R | H | -1.7578 | |
| 29 | S | H | -1.1172 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.0509 | |
| 36 | N | H | -1.8279 | |
| 37 | S | H | 0.0000 | |
| 38 | V | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | A | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.3818 | |
| 45 | A | H | -1.4537 | |
| 46 | P | H | -1.0861 | |
| 47 | G | H | -1.6781 | |
| 48 | K | H | -2.6504 | |
| 49 | E | H | -2.8738 | |
| 50 | R | H | -1.8378 | |
| 51 | E | H | -1.3762 | |
| 52 | F | H | -0.7829 | |
| 53 | L | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | L | H | 0.0000 | |
| 57 | N | H | -1.4171 | |
| 58 | W | H | 0.0000 | |
| 59 | S | H | -1.2093 | |
| 62 | S | H | -1.2647 | |
| 63 | G | H | -1.5296 | |
| 64 | R | H | -2.2569 | |
| 65 | T | H | -1.1270 | |
| 66 | S | H | -0.9331 | |
| 67 | I | H | -0.7870 | |
| 68 | A | H | -1.3385 | |
| 69 | D | H | -2.4778 | |
| 70 | S | H | -1.5068 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6663 | |
| 74 | G | H | -1.8302 | |
| 75 | R | H | -1.7122 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8959 | |
| 78 | M | H | 0.0000 | |
| 79 | S | H | -0.6942 | |
| 80 | R | H | -0.7806 | |
| 81 | D | H | -0.9996 | |
| 82 | P | H | -0.7746 | |
| 83 | A | H | -0.7672 | |
| 84 | K | H | -1.5424 | |
| 85 | I | H | -0.3031 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.5370 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1991 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.4297 | |
| 93 | G | H | -1.3509 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.1339 | |
| 96 | P | H | -1.7802 | |
| 97 | E | H | -2.1862 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.9773 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.4221 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.2178 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | N | H | -1.7727 | |
| 109 | R | H | -2.4330 | |
| 110 | G | H | -1.0475 | |
| 111 | S | H | -0.0001 | |
| 111A | L | H | 1.7635 | |
| 111B | Y | H | 0.8783 | |
| 111C | T | H | 0.1031 | |
| 112C | L | H | -0.2108 | |
| 112B | D | H | -1.2841 | |
| 112A | N | H | -1.6035 | |
| 112 | Q | H | -1.5440 | |
| 113 | N | H | -1.7952 | |
| 114 | R | H | 0.0000 | |
| 115 | Y | H | 0.0000 | |
| 116 | E | H | -1.3675 | |
| 117 | D | H | -0.7331 | |
| 118 | W | H | -0.2414 | |
| 119 | G | H | -0.4435 | |
| 120 | Q | H | -1.1954 | |
| 121 | G | H | 0.0000 | |
| 122 | R | H | -1.2882 | mutated: TR122H |
| 123 | Q | H | -1.3289 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -1.0112 | |
| 126 | A | H | 0.0000 | mutated: VA126H |
| 127 | S | H | -1.3435 | |
| 128 | S | H | -1.1415 |