| Chain sequence(s) |
A: QKEVEQSSGPLSVPEGASASLNCTYSDRGSQSFFWYRQYPGKGPELLMSLWNSGDKEDGRFTAQLNKASQYVSLLIRDSQPSDSATYLCAVANERNYQLIWGAGTKLIIKPGGGSEGGGSEGGGSEGGGSEGGTGDAGVTQTPRHLIKTRGQQVTLSCSPISGHRSVSWYQQTPGQGLQFLFEFYHGSLRNKGNFPDRFSGRQFSNSRSEMNVSTLELGDSALYLCASSLAGDTQYFGPGTRLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25)
[INFO] Main: Simulation completed successfully. (00:02:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.4665 | |
| 2 | K | A | -3.2085 | |
| 3 | E | A | -3.3259 | |
| 4 | V | A | 0.0000 | |
| 5 | E | A | -2.4440 | |
| 6 | Q | A | -1.3967 | |
| 7 | S | A | -1.1813 | |
| 8 | S | A | -1.0845 | |
| 9 | G | A | -1.0639 | |
| 10 | P | A | -0.8646 | |
| 11 | L | A | -0.2148 | |
| 12 | S | A | -0.5775 | |
| 13 | V | A | -0.7772 | |
| 14 | P | A | -1.9441 | |
| 15 | E | A | -2.8256 | |
| 16 | G | A | -2.4428 | |
| 17 | A | A | -1.7300 | |
| 18 | S | A | -1.3843 | |
| 19 | A | A | 0.0000 | |
| 20 | S | A | -0.2159 | |
| 21 | L | A | 0.0000 | |
| 22 | N | A | -0.8920 | |
| 23 | C | A | 0.0000 | |
| 24 | T | A | -1.2413 | |
| 25 | Y | A | 0.0000 | |
| 26 | S | A | -2.1135 | |
| 27 | D | A | 0.0000 | |
| 28 | R | A | -2.3454 | |
| 29 | G | A | -1.7053 | |
| 30 | S | A | 0.0000 | |
| 31 | Q | A | -0.8781 | |
| 32 | S | A | 0.0000 | |
| 33 | F | A | 0.0000 | |
| 34 | F | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.7956 | |
| 38 | Q | A | 0.0000 | |
| 39 | Y | A | -0.9063 | |
| 40 | P | A | -0.7766 | |
| 41 | G | A | -1.6654 | |
| 42 | K | A | -2.1415 | |
| 43 | G | A | 0.0000 | |
| 44 | P | A | 0.0000 | |
| 45 | E | A | -1.2390 | |
| 46 | L | A | 0.0507 | |
| 47 | L | A | -0.1807 | |
| 48 | M | A | 0.0000 | |
| 49 | S | A | -0.0174 | |
| 50 | L | A | 0.0000 | |
| 51 | W | A | 0.3519 | |
| 52 | N | A | -0.5676 | |
| 53 | S | A | -1.2438 | |
| 54 | G | A | -1.8451 | |
| 55 | D | A | -3.1966 | |
| 56 | K | A | -3.3815 | |
| 57 | E | A | -3.8907 | |
| 58 | D | A | -3.2371 | |
| 59 | G | A | -2.1188 | |
| 60 | R | A | -2.1375 | |
| 61 | F | A | 0.0000 | |
| 62 | T | A | 0.0000 | |
| 63 | A | A | 0.0000 | |
| 64 | Q | A | -2.2880 | |
| 65 | L | A | -1.5128 | |
| 66 | N | A | -1.6719 | |
| 67 | K | A | -1.6952 | |
| 68 | A | A | -0.8568 | |
| 69 | S | A | -0.8555 | |
| 70 | Q | A | -1.0585 | |
| 71 | Y | A | -0.6748 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | 0.0000 | |
| 74 | L | A | 0.0000 | |
| 75 | L | A | -0.4397 | |
| 76 | I | A | 0.0000 | |
| 77 | R | A | -2.0966 | |
| 78 | D | A | -2.8981 | |
| 79 | S | A | 0.0000 | |
| 80 | Q | A | -1.9536 | |
| 81 | P | A | -1.2814 | |
| 82 | S | A | -0.5730 | |
| 83 | D | A | 0.0000 | |
| 84 | S | A | -0.5704 | |
| 85 | A | A | 0.0000 | |
| 86 | T | A | -0.6550 | |
| 87 | Y | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | C | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | V | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | N | A | 0.0000 | |
| 94 | E | A | -2.2746 | |
| 95 | R | A | -2.6842 | |
| 96 | N | A | -2.1386 | |
| 97 | Y | A | -0.7917 | |
| 98 | Q | A | -0.7407 | |
| 99 | L | A | 0.0000 | |
| 100 | I | A | -0.6784 | |
| 101 | W | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | A | A | -1.3917 | |
| 104 | G | A | -1.2861 | |
| 105 | T | A | 0.0000 | |
| 106 | K | A | -1.6195 | |
| 107 | L | A | 0.0000 | |
| 108 | I | A | -0.6009 | |
| 109 | I | A | 0.0000 | |
| 110 | K | A | -2.1906 | |
| 111 | P | A | -1.8460 | |
| 112 | G | A | -1.7587 | |
| 113 | G | A | -1.6285 | |
| 114 | G | A | -1.4298 | |
| 115 | S | A | -1.6622 | |
| 116 | E | A | -2.4854 | |
| 117 | G | A | -1.7933 | |
| 118 | G | A | -1.4273 | |
| 119 | G | A | -1.5696 | |
| 120 | S | A | -1.5557 | |
| 121 | E | A | -2.3509 | |
| 122 | G | A | -1.8051 | |
| 123 | G | A | -1.3587 | |
| 124 | G | A | -1.4036 | |
| 125 | S | A | -1.6941 | |
| 126 | E | A | -2.4527 | |
| 127 | G | A | -1.8326 | |
| 128 | G | A | -1.7658 | |
| 129 | G | A | -1.7197 | |
| 130 | S | A | -1.7125 | |
| 131 | E | A | -2.4704 | |
| 132 | G | A | -1.7647 | |
| 133 | G | A | -1.6257 | |
| 134 | T | A | -1.2996 | |
| 135 | G | A | -1.5786 | |
| 136 | D | A | -2.2085 | |
| 137 | A | A | -1.2127 | |
| 138 | G | A | -0.7888 | |
| 139 | V | A | 0.0000 | |
| 140 | T | A | -0.4439 | |
| 141 | Q | A | 0.0000 | |
| 142 | T | A | -1.0811 | |
| 143 | P | A | -1.5479 | |
| 144 | R | A | -3.0340 | |
| 145 | H | A | -2.0813 | |
| 146 | L | A | -0.2900 | |
| 147 | I | A | 1.7430 | |
| 148 | K | A | 0.3799 | |
| 149 | T | A | -0.2995 | |
| 150 | R | A | -1.7737 | |
| 151 | G | A | -1.6851 | |
| 152 | Q | A | -2.1674 | |
| 153 | Q | A | -2.1721 | |
| 154 | V | A | 0.0000 | |
| 155 | T | A | -0.5265 | |
| 156 | L | A | 0.0000 | |
| 157 | S | A | -0.6344 | |
| 158 | C | A | 0.0000 | |
| 159 | S | A | -0.6069 | |
| 160 | P | A | -0.5031 | |
| 161 | I | A | -0.5141 | |
| 162 | S | A | -1.0913 | |
| 163 | G | A | -0.7837 | |
| 164 | H | A | 0.0000 | |
| 165 | R | A | -2.0435 | |
| 166 | S | A | -1.0482 | |
| 167 | V | A | 0.0000 | |
| 168 | S | A | 0.0000 | |
| 169 | W | A | 0.0000 | |
| 170 | Y | A | 0.0000 | |
| 171 | Q | A | 0.0000 | |
| 172 | Q | A | -1.1329 | |
| 173 | T | A | -0.9682 | |
| 174 | P | A | -0.9042 | |
| 175 | G | A | -1.4550 | |
| 176 | Q | A | -1.7671 | |
| 177 | G | A | -1.2951 | |
| 178 | L | A | 0.0000 | |
| 179 | Q | A | -1.5110 | |
| 180 | F | A | 0.0000 | |
| 181 | L | A | 0.0000 | |
| 182 | F | A | 0.0000 | |
| 183 | E | A | -1.3560 | |
| 184 | F | A | 0.0000 | |
| 185 | Y | A | -1.0667 | |
| 186 | H | A | -1.8327 | |
| 187 | G | A | -1.6556 | |
| 188 | S | A | -0.9865 | |
| 189 | L | A | -1.1278 | |
| 190 | R | A | -2.2476 | |
| 191 | N | A | -1.9519 | |
| 192 | K | A | -2.4138 | |
| 193 | G | A | -1.7138 | |
| 194 | N | A | -1.8920 | |
| 195 | F | A | -1.2045 | |
| 196 | P | A | -1.2027 | |
| 197 | D | A | -2.1056 | |
| 198 | R | A | -1.4154 | |
| 199 | F | A | 0.0000 | |
| 200 | S | A | -1.3543 | |
| 201 | G | A | -1.2223 | |
| 202 | R | A | -1.8103 | |
| 203 | Q | A | 0.0000 | |
| 204 | F | A | -0.9009 | |
| 205 | S | A | -1.2297 | |
| 206 | N | A | -1.9322 | |
| 207 | S | A | -1.8914 | |
| 208 | R | A | -1.4642 | |
| 209 | S | A | 0.0000 | |
| 210 | E | A | 0.0000 | |
| 211 | M | A | 0.0000 | |
| 212 | N | A | -1.0221 | |
| 213 | V | A | 0.0000 | |
| 214 | S | A | -1.4344 | |
| 215 | T | A | -1.7163 | |
| 216 | L | A | 0.0000 | |
| 217 | E | A | -1.0558 | |
| 218 | L | A | 0.7330 | |
| 219 | G | A | -0.0704 | |
| 220 | D | A | 0.0000 | |
| 221 | S | A | 0.1035 | |
| 222 | A | A | 0.0000 | |
| 223 | L | A | 0.0000 | |
| 224 | Y | A | 0.0000 | |
| 225 | L | A | 0.0000 | |
| 226 | C | A | 0.0000 | |
| 227 | A | A | 0.0000 | |
| 228 | S | A | 0.0000 | |
| 229 | S | A | 0.0000 | |
| 230 | L | A | 0.9146 | |
| 231 | A | A | 0.2818 | |
| 232 | G | A | -0.2593 | |
| 233 | D | A | -0.2238 | |
| 234 | T | A | 0.3612 | |
| 235 | Q | A | 0.3526 | |
| 236 | Y | A | 0.7761 | |
| 237 | F | A | 0.0810 | |
| 238 | G | A | 0.0000 | |
| 239 | P | A | -1.3030 | |
| 240 | G | A | 0.0000 | |
| 241 | T | A | 0.0000 | |
| 242 | R | A | -2.6263 | |
| 243 | L | A | 0.0000 | |
| 244 | T | A | 0.3754 | |
| 245 | V | A | 0.0000 | |
| 246 | L | A | 1.5499 |