Project name: Nb48-1

Status: done

Started: 2026-01-17 14:51:15
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Chain sequence(s) A: QVQLVESGGLPVQAGGSLKLSCAASAGLRAGPIHYGWFRQAPGKEREGVAVESDDTALGFATYADSVKGRFTISQDNSKNTVYLQMNSLRPEDTAVYYCAASIRRCTWYHPTQYNYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:20)
Show buried residues

Minimal score value
-3.6263
Maximal score value
1.2468
Average score
-0.7406
Total score value
-94.0509

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4150
2 V A -1.2060
3 Q A -0.9239
4 L A 0.0000
5 V A 0.9588
6 E A 0.0000
7 S A -0.0973
8 G A -0.5077
9 G A -0.1730
10 L A 0.8679
11 P A 0.0558
12 V A -0.4517
13 Q A -1.6751
14 A A -1.6794
15 G A -1.3201
16 G A -1.0743
17 S A -1.2991
18 L A -0.8908
19 K A -1.9156
20 L A 0.0000
21 S A -0.3984
22 C A 0.0000
23 A A -0.1646
24 A A 0.0000
25 S A -0.6219
26 A A -0.9186
27 G A -1.2362
28 L A -1.0974
29 R A -1.8029
30 A A -0.9844
31 G A -1.0846
32 P A -1.0907
33 I A -0.9113
34 H A 0.0000
35 Y A 0.0000
36 G A 0.0000
37 W A 0.0000
38 F A 0.0000
39 R A 0.0000
40 Q A -2.1755
41 A A -2.0375
42 P A -1.4116
43 G A -1.9521
44 K A -3.3775
45 E A -3.6263
46 R A -2.9219
47 E A -2.1789
48 G A 0.0000
49 V A 0.0000
50 A A 0.0000
51 V A 0.0000
52 E A -0.4634
53 S A 0.0000
54 D A -1.2324
55 D A -0.5411
56 T A -0.0367
57 A A 0.5067
58 L A 1.2468
59 G A 0.1226
60 F A 0.3700
61 A A -0.0056
62 T A -0.1038
63 Y A -0.7413
64 A A 0.0000
65 D A -2.5256
66 S A -1.8046
67 V A 0.0000
68 K A -2.6467
69 G A -1.7749
70 R A -1.6114
71 F A 0.0000
72 T A -0.9694
73 I A 0.0000
74 S A -0.7526
75 Q A -1.4794
76 D A -2.1065
77 N A -2.5584
78 S A -1.9615
79 K A -2.5998
80 N A -1.8928
81 T A 0.0000
82 V A 0.0000
83 Y A -0.6774
84 L A 0.0000
85 Q A -1.5495
86 M A 0.0000
87 N A -1.4669
88 S A -1.1641
89 L A 0.0000
90 R A -2.2528
91 P A -1.8736
92 E A -2.3010
93 D A 0.0000
94 T A -1.1459
95 A A 0.0000
96 V A -0.5808
97 Y A 0.0000
98 Y A -0.2366
99 C A 0.0000
100 A A 0.0000
101 A A 0.0000
102 S A 0.0000
103 I A -0.9461
104 R A -2.2200
105 R A -2.5015
106 C A 0.0000
107 T A -0.2137
108 W A 0.4394
109 Y A 0.9199
110 H A -0.3049
111 P A -0.4632
112 T A -0.3912
113 Q A -1.0611
114 Y A 0.0000
115 N A -0.9129
116 Y A -0.2841
117 W A 0.0026
118 G A -0.1039
119 Q A -0.8582
120 G A 0.0000
121 T A 0.0000
122 Q A -0.8569
123 V A 0.0000
124 T A -0.5893
125 V A 0.0000
126 S A -1.2558
127 S A -0.9008
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Laboratory of Theory of Biopolymers 2018