| Chain sequence(s) |
A: QVQLVESGGLPVQAGGSLKLSCAASAGLRAGPIHYGWFRQAPGKEREGVAVESDDTALGFATYADSVKGRFTISQDNSKNTVYLQMNSLRPEDTAVYYCAASIRRCTWYHPTQYNYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:19)
[INFO] Main: Simulation completed successfully. (00:02:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.4150 | |
| 2 | V | A | -1.2060 | |
| 3 | Q | A | -0.9239 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.9588 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.0973 | |
| 8 | G | A | -0.5077 | |
| 9 | G | A | -0.1730 | |
| 10 | L | A | 0.8679 | |
| 11 | P | A | 0.0558 | |
| 12 | V | A | -0.4517 | |
| 13 | Q | A | -1.6751 | |
| 14 | A | A | -1.6794 | |
| 15 | G | A | -1.3201 | |
| 16 | G | A | -1.0743 | |
| 17 | S | A | -1.2991 | |
| 18 | L | A | -0.8908 | |
| 19 | K | A | -1.9156 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3984 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1646 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6219 | |
| 26 | A | A | -0.9186 | |
| 27 | G | A | -1.2362 | |
| 28 | L | A | -1.0974 | |
| 29 | R | A | -1.8029 | |
| 30 | A | A | -0.9844 | |
| 31 | G | A | -1.0846 | |
| 32 | P | A | -1.0907 | |
| 33 | I | A | -0.9113 | |
| 34 | H | A | 0.0000 | |
| 35 | Y | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -2.1755 | |
| 41 | A | A | -2.0375 | |
| 42 | P | A | -1.4116 | |
| 43 | G | A | -1.9521 | |
| 44 | K | A | -3.3775 | |
| 45 | E | A | -3.6263 | |
| 46 | R | A | -2.9219 | |
| 47 | E | A | -2.1789 | |
| 48 | G | A | 0.0000 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | V | A | 0.0000 | |
| 52 | E | A | -0.4634 | |
| 53 | S | A | 0.0000 | |
| 54 | D | A | -1.2324 | |
| 55 | D | A | -0.5411 | |
| 56 | T | A | -0.0367 | |
| 57 | A | A | 0.5067 | |
| 58 | L | A | 1.2468 | |
| 59 | G | A | 0.1226 | |
| 60 | F | A | 0.3700 | |
| 61 | A | A | -0.0056 | |
| 62 | T | A | -0.1038 | |
| 63 | Y | A | -0.7413 | |
| 64 | A | A | 0.0000 | |
| 65 | D | A | -2.5256 | |
| 66 | S | A | -1.8046 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.6467 | |
| 69 | G | A | -1.7749 | |
| 70 | R | A | -1.6114 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.9694 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.7526 | |
| 75 | Q | A | -1.4794 | |
| 76 | D | A | -2.1065 | |
| 77 | N | A | -2.5584 | |
| 78 | S | A | -1.9615 | |
| 79 | K | A | -2.5998 | |
| 80 | N | A | -1.8928 | |
| 81 | T | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -0.6774 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.5495 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -1.4669 | |
| 88 | S | A | -1.1641 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -2.2528 | |
| 91 | P | A | -1.8736 | |
| 92 | E | A | -2.3010 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -1.1459 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | -0.5808 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | -0.2366 | |
| 99 | C | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | S | A | 0.0000 | |
| 103 | I | A | -0.9461 | |
| 104 | R | A | -2.2200 | |
| 105 | R | A | -2.5015 | |
| 106 | C | A | 0.0000 | |
| 107 | T | A | -0.2137 | |
| 108 | W | A | 0.4394 | |
| 109 | Y | A | 0.9199 | |
| 110 | H | A | -0.3049 | |
| 111 | P | A | -0.4632 | |
| 112 | T | A | -0.3912 | |
| 113 | Q | A | -1.0611 | |
| 114 | Y | A | 0.0000 | |
| 115 | N | A | -0.9129 | |
| 116 | Y | A | -0.2841 | |
| 117 | W | A | 0.0026 | |
| 118 | G | A | -0.1039 | |
| 119 | Q | A | -0.8582 | |
| 120 | G | A | 0.0000 | |
| 121 | T | A | 0.0000 | |
| 122 | Q | A | -0.8569 | |
| 123 | V | A | 0.0000 | |
| 124 | T | A | -0.5893 | |
| 125 | V | A | 0.0000 | |
| 126 | S | A | -1.2558 | |
| 127 | S | A | -0.9008 |