| Chain sequence(s) |
A: DNAITNLLAGRVSQMRMLPLGVLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9652 | |
| 2 | N | A | -1.5262 | |
| 3 | A | A | -0.0201 | |
| 4 | I | A | 1.4203 | |
| 5 | T | A | 0.0590 | |
| 6 | N | A | -0.3488 | |
| 7 | L | A | 1.4496 | |
| 8 | L | A | 1.6447 | |
| 9 | A | A | 0.7621 | |
| 10 | G | A | -0.2160 | |
| 11 | R | A | -0.7987 | |
| 12 | V | A | 0.9907 | |
| 13 | S | A | 0.0573 | |
| 14 | Q | A | -0.4760 | |
| 15 | M | A | 0.6303 | |
| 16 | R | A | 0.0054 | |
| 17 | M | A | 1.0168 | |
| 18 | L | A | 1.5396 | |
| 19 | P | A | 1.4792 | |
| 20 | L | A | 2.3769 | |
| 21 | G | A | 1.7739 | |
| 22 | V | A | 2.0849 | |
| 23 | L | A | 2.4183 | |
| 24 | S | A | 1.1184 |