| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVSYYVITYGETGGSYWHYQTFKVPGSKSTATISGLKPGVDYTITVYAYSPYYPAPYRSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7874 | |
| 2 | S | A | 0.7945 | |
| 3 | S | A | 0.4841 | |
| 4 | V | A | 0.2923 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2639 | |
| 7 | K | A | -2.3669 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7982 | |
| 10 | V | A | 0.1280 | |
| 11 | V | A | 1.5481 | |
| 12 | A | A | 0.8997 | |
| 13 | A | A | 0.3228 | |
| 14 | T | A | -0.3361 | |
| 15 | P | A | -1.1102 | |
| 16 | T | A | -0.9954 | |
| 17 | S | A | -0.5291 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7570 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7588 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.6862 | |
| 24 | A | A | -0.7717 | |
| 25 | P | A | 0.2673 | |
| 26 | A | A | 0.5682 | |
| 27 | V | A | 0.7022 | |
| 28 | T | A | 0.2092 | |
| 29 | V | A | 0.0579 | |
| 30 | S | A | 0.1531 | |
| 31 | Y | A | -0.7750 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.4924 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.4163 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.7722 | |
| 39 | T | A | -1.1342 | |
| 40 | G | A | -0.7963 | |
| 41 | G | A | -0.6414 | |
| 42 | S | A | 0.2534 | |
| 43 | Y | A | 1.1735 | |
| 44 | W | A | 1.1117 | |
| 45 | H | A | -0.4090 | |
| 46 | Y | A | -0.2747 | |
| 47 | Q | A | -0.9346 | |
| 48 | T | A | -0.7098 | |
| 49 | F | A | -0.4825 | |
| 50 | K | A | -1.3557 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.0947 | |
| 53 | G | A | -0.8977 | |
| 54 | S | A | -1.1163 | |
| 55 | K | A | -1.9614 | |
| 56 | S | A | -1.1924 | |
| 57 | T | A | -0.6492 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2430 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6607 | |
| 62 | G | A | -1.0274 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3867 | |
| 65 | P | A | -1.6509 | |
| 66 | G | A | -1.4491 | |
| 67 | V | A | -1.4561 | |
| 68 | D | A | -2.1498 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.0110 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | -0.0974 | |
| 77 | S | A | 0.0000 | |
| 78 | P | A | 0.5817 | |
| 79 | Y | A | 1.5159 | |
| 80 | Y | A | 1.7227 | |
| 81 | P | A | 0.8686 | |
| 82 | A | A | 0.6751 | |
| 83 | P | A | 0.6416 | |
| 84 | Y | A | 0.7693 | |
| 85 | R | A | -1.0486 | |
| 86 | S | A | 0.0000 | |
| 87 | S | A | -0.3974 | |
| 88 | P | A | -0.2957 | |
| 89 | I | A | 0.0473 | |
| 90 | S | A | -0.5384 | |
| 91 | I | A | -0.7054 | |
| 92 | N | A | -1.7459 | |
| 93 | Y | A | -1.4768 | |
| 94 | R | A | -2.5399 | |
| 95 | T | A | -1.4989 |