| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYQHDTADVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPDGHPLPDAPPPSPLYVRPPPSSPEWVLPPRDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9423 | |
| 2 | L | A | 1.9620 | |
| 3 | P | A | 0.8319 | |
| 4 | P | A | 0.3760 | |
| 5 | T | A | 0.1209 | |
| 6 | T | A | 0.1309 | |
| 7 | P | A | 0.1830 | |
| 8 | V | A | 1.2091 | |
| 9 | A | A | 0.0760 | |
| 10 | K | A | -1.0485 | |
| 11 | V | A | -0.2105 | |
| 12 | Q | A | -1.4463 | |
| 13 | S | A | -1.5770 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4345 | |
| 16 | E | A | -2.4501 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4590 | |
| 20 | P | A | 0.1279 | |
| 21 | T | A | 0.1611 | |
| 22 | S | A | -0.0944 | |
| 23 | L | A | 0.0970 | |
| 24 | F | A | -0.0273 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2941 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9042 | |
| 31 | R | A | -2.6892 | |
| 32 | L | A | -0.8038 | |
| 33 | L | A | 1.1560 | |
| 34 | T | A | 1.3656 | |
| 35 | V | A | 1.8255 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2261 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5987 | |
| 40 | K | A | -1.6206 | |
| 41 | D | A | -0.9099 | |
| 42 | I | A | 0.8276 | |
| 43 | V | A | 0.8996 | |
| 44 | K | A | -1.4133 | |
| 45 | D | A | -2.4365 | |
| 46 | G | A | -1.4740 | |
| 47 | K | A | -1.1224 | |
| 48 | V | A | 1.3766 | |
| 49 | V | A | 1.9595 | |
| 50 | V | A | 1.2437 | |
| 51 | P | A | 0.4395 | |
| 52 | K | A | -0.6397 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1647 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3884 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2687 | |
| 70 | K | A | -1.7858 | |
| 71 | F | A | -0.6334 | |
| 72 | A | A | -0.5711 | |
| 73 | L | A | -0.8536 | |
| 74 | P | A | -1.1988 | |
| 75 | Q | A | -2.5035 | |
| 76 | K | A | -3.1071 | |
| 77 | D | A | -2.9885 | |
| 78 | F | A | -1.6614 | |
| 79 | Y | A | -1.8867 | |
| 80 | D | A | -2.6869 | |
| 81 | P | A | -2.3628 | |
| 82 | E | A | -3.0509 | |
| 83 | K | A | -3.3895 | |
| 84 | E | A | -2.4575 | |
| 85 | R | A | -1.2966 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6651 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9562 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3612 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6985 | |
| 99 | G | A | -0.5367 | |
| 100 | P | A | -0.4055 | |
| 101 | L | A | 0.0401 | |
| 102 | G | A | -0.2172 | |
| 103 | K | A | -0.6212 | |
| 104 | G | A | -0.4565 | |
| 105 | T | A | -0.4440 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0977 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2992 | |
| 110 | L | A | 0.2983 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9764 | |
| 113 | K | A | -0.2962 | |
| 114 | L | A | -0.9657 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3608 | |
| 117 | T | A | -1.0376 | |
| 118 | E | A | -1.7052 | |
| 119 | N | A | -2.1706 | |
| 120 | P | A | -1.8778 | |
| 121 | T | A | -1.5330 | |
| 122 | E | A | -2.0965 | |
| 123 | Y | A | -0.8963 | |
| 124 | Q | A | -1.1831 | |
| 125 | H | A | -1.3357 | |
| 126 | D | A | -2.0114 | |
| 127 | T | A | -1.2885 | |
| 128 | A | A | -1.2466 | |
| 129 | D | A | -1.9335 | |
| 130 | V | A | -1.1096 | |
| 131 | R | A | -0.7466 | |
| 132 | V | A | 0.2865 | |
| 133 | S | A | 0.1749 | |
| 134 | F | A | 0.1497 | |
| 135 | S | A | -0.1254 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5854 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5666 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1907 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1559 | |
| 157 | D | A | 0.3238 | |
| 158 | L | A | 0.7965 | |
| 159 | A | A | 0.1719 | |
| 160 | E | A | -1.4554 | |
| 161 | P | A | -0.2108 | |
| 162 | C | A | 0.1887 | |
| 163 | P | A | -0.1686 | |
| 164 | G | A | -0.0771 | |
| 165 | L | A | 0.5931 | |
| 166 | P | A | -0.1155 | |
| 167 | P | A | -0.3408 | |
| 168 | G | A | -0.4228 | |
| 169 | A | A | -0.0274 | |
| 170 | C | A | 0.6524 | |
| 171 | P | A | 0.5200 | |
| 172 | P | A | 0.8405 | |
| 173 | I | A | 1.9890 | |
| 174 | Q | A | 0.8474 | |
| 175 | L | A | 1.4966 | |
| 176 | V | A | 0.8584 | |
| 177 | N | A | -0.2950 | |
| 178 | S | A | 0.0290 | |
| 179 | V | A | 0.4235 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3808 | |
| 182 | D | A | 0.0772 | |
| 183 | G | A | -0.1586 | |
| 184 | D | A | -0.5310 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1226 | |
| 190 | F | A | 0.0679 | |
| 191 | G | A | -0.1001 | |
| 192 | N | A | -0.2466 | |
| 193 | M | A | -0.1060 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3967 | |
| 197 | E | A | -2.6267 | |
| 198 | L | A | -1.2474 | |
| 199 | Q | A | -2.5657 | |
| 200 | Q | A | -3.3026 | |
| 201 | D | A | -3.5603 | |
| 202 | R | A | -3.3289 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2140 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3372 | |
| 211 | S | A | -1.8821 | |
| 212 | T | A | -1.4277 | |
| 213 | R | A | -2.0632 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1526 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3855 | |
| 220 | L | A | 0.6166 | |
| 221 | K | A | -1.0869 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8058 | |
| 224 | N | A | -1.4824 | |
| 225 | E | A | -1.2220 | |
| 226 | A | A | -0.6078 | |
| 227 | Y | A | -0.3599 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6687 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0815 | |
| 234 | F | A | 0.2679 | |
| 235 | G | A | -0.8089 | |
| 236 | R | A | -2.5833 | |
| 237 | R | A | -2.8278 | |
| 238 | E | A | -2.0664 | |
| 239 | Q | A | -0.1329 | |
| 240 | V | A | 1.5262 | |
| 241 | Y | A | 1.2375 | |
| 242 | A | A | 0.3816 | |
| 243 | R | A | -0.6475 | |
| 244 | H | A | -0.7606 | |
| 245 | F | A | 0.1859 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.9499 | |
| 249 | A | A | -1.3096 | |
| 250 | G | A | -1.1572 | |
| 251 | P | A | -1.2613 | |
| 252 | D | A | -1.5444 | |
| 253 | G | A | -1.3563 | |
| 254 | H | A | -1.5452 | |
| 255 | P | A | -1.1477 | |
| 256 | L | A | -0.2873 | |
| 257 | P | A | -0.8797 | |
| 258 | D | A | -2.0122 | |
| 259 | A | A | -0.7796 | |
| 260 | P | A | -0.8123 | |
| 261 | P | A | -0.3477 | |
| 262 | P | A | -0.0192 | |
| 263 | S | A | 0.2100 | |
| 264 | P | A | 0.7130 | |
| 265 | L | A | 1.7859 | |
| 266 | Y | A | 1.5480 | |
| 267 | V | A | 1.5848 | |
| 268 | R | A | 0.1635 | |
| 269 | P | A | 0.1017 | |
| 270 | P | A | -0.4592 | |
| 271 | P | A | -0.3234 | |
| 272 | S | A | -0.2914 | |
| 273 | S | A | -0.1954 | |
| 274 | P | A | -0.0518 | |
| 275 | E | A | -0.0294 | |
| 276 | W | A | 0.8176 | |
| 277 | V | A | 1.7420 | |
| 278 | L | A | 0.9783 | |
| 279 | P | A | -0.2543 | |
| 280 | P | A | -0.8233 | |
| 281 | R | A | -0.8784 | |
| 282 | D | A | -1.3903 | |
| 283 | Y | A | 0.5893 | |
| 284 | F | A | 0.5801 | |
| 285 | G | A | 0.3308 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9859 | |
| 291 | L | A | 1.6282 | |
| 292 | V | A | 0.6381 | |
| 293 | S | A | -0.1550 | |
| 294 | S | A | -0.9607 | |
| 295 | D | A | -1.8422 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1010 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6277 | |
| 301 | R | A | -1.8120 | |
| 302 | P | A | -0.9339 | |
| 303 | F | A | -0.1874 | |
| 304 | W | A | -0.5649 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0854 | |
| 307 | R | A | -2.8346 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2583 | |
| 310 | G | A | -1.2241 | |
| 311 | N | A | -1.2865 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7996 | |
| 319 | N | A | -0.9299 | |
| 320 | E | A | -1.0440 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3458 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0871 | |
| 333 | N | A | 0.5420 | |
| 334 | F | A | 1.7343 | |
| 335 | T | A | 0.8658 | |
| 336 | I | A | 0.4651 | |
| 337 | S | A | -0.8204 | |
| 338 | Q | A | -1.4773 | |
| 339 | Q | A | -0.8272 | |
| 340 | L | A | 0.8156 | |
| 341 | C | A | 0.4357 | |
| 342 | T | A | 0.1607 | |
| 343 | P | A | -0.2709 | |
| 344 | A | A | 0.1971 | |
| 345 | P | A | 0.1843 | |
| 346 | N | A | -0.2772 | |
| 347 | V | A | 1.5486 | |
| 348 | Y | A | 1.4437 | |
| 349 | D | A | 0.0561 | |
| 350 | P | A | -0.3333 | |
| 351 | S | A | -0.2648 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5483 | |
| 354 | K | A | -1.6482 | |
| 355 | N | A | -1.6885 | |
| 356 | Y | A | -0.0851 | |
| 357 | L | A | 0.6376 | |
| 358 | R | A | 0.9627 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3840 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0876 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0606 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6918 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2993 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3021 | |
| 376 | L | A | -1.6931 | |
| 377 | D | A | -1.9553 | |
| 378 | P | A | -1.0222 | |
| 379 | G | A | -1.0028 | |
| 380 | V | A | -0.9234 | |
| 381 | L | A | -0.5203 | |
| 382 | A | A | -0.6467 | |
| 383 | H | A | -0.8085 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4017 | |
| 386 | T | A | -0.5508 | |
| 387 | M | A | -0.2985 | |
| 388 | N | A | -0.8612 | |
| 389 | P | A | -1.2337 | |
| 390 | T | A | -1.4238 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4193 | |
| 393 | E | A | -2.7459 | |
| 394 | N | A | -2.3290 | |
| 395 | W | A | -1.3490 | |
| 396 | N | A | -1.1035 | |
| 397 | L | A | -0.1679 | |
| 398 | G | A | 0.5153 | |
| 399 | F | A | 2.4116 | |
| 400 | V | A | 1.8265 | |
| 401 | P | A | 0.0477 | |
| 402 | P | A | -1.8265 | |
| 403 | K | A | -3.2984 | |
| 404 | E | A | -3.7509 | |
| 405 | R | A | -3.8525 | |
| 406 | E | A | -3.7604 | |
| 407 | D | A | -2.8608 | |
| 408 | P | A | -1.7563 | |
| 409 | Y | A | -0.9880 | |
| 410 | K | A | -2.1128 | |
| 411 | G | A | -0.6366 | |
| 412 | L | A | 0.6776 | |
| 413 | I | A | 1.5887 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3926 | |
| 416 | E | A | -1.6968 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9600 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0597 | |
| 421 | E | A | -2.7923 | |
| 422 | R | A | -2.6525 | |
| 423 | F | A | -1.2883 | |
| 424 | S | A | -1.4733 | |
| 425 | Q | A | -1.8551 | |
| 426 | D | A | -2.8973 | |
| 427 | L | A | -1.9902 | |
| 428 | D | A | -2.7667 | |
| 429 | Q | A | -2.6177 | |
| 430 | F | A | -1.4355 | |
| 431 | A | A | -0.9213 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6634 | |
| 435 | K | A | -0.7552 | |
| 436 | F | A | 0.1140 | |
| 437 | L | A | 1.0008 | |
| 438 | Y | A | 0.8001 | |
| 439 | Q | A | -0.2925 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine