| Chain sequence(s) |
A: GIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCRRKKEAAAKSSQTIEIYKQAAYSSYMGPIAVYAAYLKVDASFFFLAAYMSCVDTHAKKAAYYSNNASQFYIAAYLGSISPTYAKAAYMHASSLSSMYAAYISVPSQPSGFGPGPGESIITSDPEWDGPGPGDIASSSVSSSSKKKHNRVDGSTSASHLDMSTNKKNSGSTAKDSSETKTSGSAKSVSSISSEAAAK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:03)
[INFO] Main: Simulation completed successfully. (00:03:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.9825 | |
| 2 | I | A | 2.5786 | |
| 3 | I | A | 2.3262 | |
| 4 | N | A | 0.3092 | |
| 5 | T | A | 1.0620 | |
| 6 | L | A | 1.3931 | |
| 7 | Q | A | -0.2337 | |
| 8 | K | A | -1.2622 | |
| 9 | Y | A | 0.6764 | |
| 10 | Y | A | 0.3089 | |
| 11 | C | A | 0.0000 | |
| 12 | R | A | -1.7597 | |
| 13 | V | A | 0.1279 | |
| 14 | R | A | -1.6029 | |
| 15 | G | A | -1.9205 | |
| 16 | G | A | 0.0000 | |
| 17 | R | A | -2.2655 | |
| 18 | C | A | -1.2023 | |
| 19 | A | A | 0.2498 | |
| 20 | V | A | 1.4968 | |
| 21 | L | A | 1.9261 | |
| 22 | S | A | 0.6664 | |
| 23 | C | A | -0.2507 | |
| 24 | L | A | -0.1510 | |
| 25 | P | A | -1.0003 | |
| 26 | K | A | -2.3717 | |
| 27 | E | A | 0.0000 | |
| 28 | E | A | -2.0688 | |
| 29 | Q | A | -1.6172 | |
| 30 | I | A | -1.2217 | |
| 31 | G | A | -1.2573 | |
| 32 | K | A | -2.5839 | |
| 33 | C | A | 0.0000 | |
| 34 | S | A | -1.6917 | |
| 35 | T | A | -1.5314 | |
| 36 | R | A | -2.4661 | |
| 37 | G | A | -1.7374 | |
| 38 | R | A | -1.9916 | |
| 39 | K | A | -1.8133 | |
| 40 | C | A | 0.0000 | |
| 41 | C | A | 0.0000 | |
| 42 | R | A | -3.1686 | |
| 43 | R | A | -4.0241 | |
| 44 | K | A | -4.2008 | |
| 45 | K | A | -4.0336 | |
| 46 | E | A | -3.4592 | |
| 47 | A | A | -2.0904 | |
| 48 | A | A | -2.3797 | |
| 49 | A | A | -2.3759 | |
| 50 | K | A | -2.4664 | |
| 51 | S | A | -1.3692 | |
| 52 | S | A | -0.7449 | |
| 53 | Q | A | -1.1879 | |
| 54 | T | A | -0.0486 | |
| 55 | I | A | 0.8569 | |
| 56 | E | A | -0.6745 | |
| 57 | I | A | 1.4131 | |
| 58 | Y | A | 1.4931 | |
| 59 | K | A | -0.0520 | |
| 60 | Q | A | -0.3119 | |
| 61 | A | A | 0.6195 | |
| 62 | A | A | 0.9227 | |
| 63 | Y | A | 1.2516 | |
| 64 | S | A | 0.6703 | |
| 65 | S | A | 1.2062 | |
| 66 | Y | A | 1.8660 | |
| 67 | M | A | 1.9130 | |
| 68 | G | A | 1.3923 | |
| 69 | P | A | 1.6909 | |
| 70 | I | A | 2.9977 | |
| 71 | A | A | 2.4772 | |
| 72 | V | A | 3.1950 | |
| 73 | Y | A | 3.1333 | |
| 74 | A | A | 2.1540 | |
| 75 | A | A | 1.7593 | |
| 76 | Y | A | 2.4127 | |
| 77 | L | A | 1.6644 | |
| 78 | K | A | -0.0825 | |
| 79 | V | A | 1.3860 | |
| 80 | D | A | 1.1401 | |
| 81 | A | A | 1.6013 | |
| 82 | S | A | 2.1148 | |
| 83 | F | A | 3.5758 | |
| 84 | F | A | 4.1823 | |
| 85 | F | A | 4.1820 | |
| 86 | L | A | 3.6689 | |
| 87 | A | A | 2.6325 | |
| 88 | A | A | 2.7281 | |
| 89 | Y | A | 3.3077 | |
| 90 | M | A | 1.7695 | |
| 91 | S | A | 0.6345 | |
| 92 | C | A | 1.3106 | |
| 93 | V | A | 1.0017 | |
| 94 | D | A | -1.6194 | |
| 95 | T | A | -1.7154 | |
| 96 | H | A | -2.2209 | |
| 97 | A | A | -1.3394 | |
| 98 | K | A | -1.9532 | |
| 99 | K | A | -2.0540 | |
| 100 | A | A | -0.8378 | |
| 101 | A | A | -0.5572 | |
| 102 | Y | A | -0.1146 | |
| 103 | Y | A | 0.5044 | |
| 104 | S | A | -0.4396 | |
| 105 | N | A | -0.3369 | |
| 106 | N | A | 0.2454 | |
| 107 | A | A | 0.8106 | |
| 108 | S | A | 0.6603 | |
| 109 | Q | A | 1.0281 | |
| 110 | F | A | 2.6782 | |
| 111 | Y | A | 2.5532 | |
| 112 | I | A | 2.2579 | |
| 113 | A | A | 0.0000 | |
| 114 | A | A | 1.8538 | |
| 115 | Y | A | 2.1500 | |
| 116 | L | A | 1.7477 | |
| 117 | G | A | 0.9671 | |
| 118 | S | A | 1.1439 | |
| 119 | I | A | 2.2065 | |
| 120 | S | A | 0.9712 | |
| 121 | P | A | 0.0282 | |
| 122 | T | A | 0.1128 | |
| 123 | Y | A | 1.1746 | |
| 124 | A | A | 0.7473 | |
| 125 | K | A | -0.9783 | |
| 126 | A | A | -0.0651 | |
| 127 | A | A | 0.4709 | |
| 128 | Y | A | 0.8679 | |
| 129 | M | A | 0.4586 | |
| 130 | H | A | -0.2707 | |
| 131 | A | A | 0.5549 | |
| 132 | S | A | 0.4192 | |
| 133 | S | A | 0.7101 | |
| 134 | L | A | 1.6385 | |
| 135 | S | A | 0.7996 | |
| 136 | S | A | 0.9499 | |
| 137 | M | A | 2.0293 | |
| 138 | Y | A | 2.4965 | |
| 139 | A | A | 2.0776 | |
| 140 | A | A | 2.0910 | |
| 141 | Y | A | 3.1891 | |
| 142 | I | A | 3.3538 | |
| 143 | S | A | 2.0755 | |
| 144 | V | A | 2.3137 | |
| 145 | P | A | 0.5731 | |
| 146 | S | A | -0.3569 | |
| 147 | Q | A | -1.3535 | |
| 148 | P | A | -0.8884 | |
| 149 | S | A | -0.5457 | |
| 150 | G | A | 0.0096 | |
| 151 | F | A | 1.2777 | |
| 152 | G | A | 0.0713 | |
| 153 | P | A | -0.6575 | |
| 154 | G | A | -0.9576 | |
| 155 | P | A | -1.2597 | |
| 156 | G | A | -1.4553 | |
| 157 | E | A | -1.5024 | |
| 158 | S | A | 0.2789 | |
| 159 | I | A | 2.2942 | |
| 160 | I | A | 2.3779 | |
| 161 | T | A | 0.8396 | |
| 162 | S | A | -0.6024 | |
| 163 | D | A | -2.1358 | |
| 164 | P | A | -1.9647 | |
| 165 | E | A | -2.4115 | |
| 166 | W | A | -1.0102 | |
| 167 | D | A | -2.0268 | |
| 168 | G | A | -1.3667 | |
| 169 | P | A | -1.2724 | |
| 170 | G | A | -1.3998 | |
| 171 | P | A | -0.9200 | |
| 172 | G | A | -1.1490 | |
| 173 | D | A | -1.1704 | |
| 174 | I | A | 0.9382 | |
| 175 | A | A | 0.2460 | |
| 176 | S | A | 0.1514 | |
| 177 | S | A | 0.2722 | |
| 178 | S | A | 0.4144 | |
| 179 | V | A | 1.4103 | |
| 180 | S | A | 0.3980 | |
| 181 | S | A | -0.2252 | |
| 182 | S | A | -0.9074 | |
| 183 | S | A | -1.8498 | |
| 184 | K | A | -3.2429 | |
| 185 | K | A | -3.8071 | |
| 186 | K | A | -3.9901 | |
| 187 | H | A | -3.3287 | |
| 188 | N | A | -3.0186 | |
| 189 | R | A | -2.5602 | |
| 190 | V | A | -0.5701 | |
| 191 | D | A | -1.8046 | |
| 192 | G | A | -1.1924 | |
| 193 | S | A | -0.7641 | |
| 194 | T | A | -0.3680 | |
| 195 | S | A | -0.3119 | |
| 196 | A | A | -0.4093 | |
| 197 | S | A | -0.5916 | |
| 198 | H | A | -0.6574 | |
| 199 | L | A | 0.2076 | |
| 200 | D | A | -0.6833 | |
| 201 | M | A | 0.1805 | |
| 202 | S | A | -0.4870 | |
| 203 | T | A | -1.1481 | |
| 204 | N | A | -2.4899 | |
| 205 | K | A | -3.4849 | |
| 206 | K | A | -3.5587 | |
| 207 | N | A | -2.7167 | |
| 208 | S | A | -1.5255 | |
| 209 | G | A | -1.1767 | |
| 210 | S | A | -0.5102 | |
| 211 | T | A | -0.8420 | |
| 212 | A | A | -1.2631 | |
| 213 | K | A | -2.7360 | |
| 214 | D | A | -2.8842 | |
| 215 | S | A | -1.9916 | |
| 216 | S | A | -1.7795 | |
| 217 | E | A | -2.4423 | |
| 218 | T | A | -1.9151 | |
| 219 | K | A | -2.3457 | |
| 220 | T | A | -1.3549 | |
| 221 | S | A | -0.9481 | |
| 222 | G | A | -1.0419 | |
| 223 | S | A | -0.8900 | |
| 224 | A | A | -0.8712 | |
| 225 | K | A | -1.4342 | |
| 226 | S | A | -0.2459 | |
| 227 | V | A | 1.3144 | |
| 228 | S | A | 0.9770 | |
| 229 | S | A | 0.9308 | |
| 230 | I | A | 1.6887 | |
| 231 | S | A | 0.1222 | |
| 232 | S | A | -0.8289 | |
| 233 | E | A | -1.7321 | |
| 234 | A | A | -0.8593 | |
| 235 | A | A | -0.6982 | |
| 236 | A | A | -0.7425 | |
| 237 | K | A | -1.6572 |