Project name: AF V1 Edited

Status: done

Started: 2026-03-26 10:12:59
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Chain sequence(s) A: GIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCRRKKEAAAKSSQTIEIYKQAAYSSYMGPIAVYAAYLKVDASFFFLAAYMSCVDTHAKKAAYYSNNASQFYIAAYLGSISPTYAKAAYMHASSLSSMYAAYISVPSQPSGFGPGPGESIITSDPEWDGPGPGDIASSSVSSSSKKKHNRVDGSTSASHLDMSTNKKNSGSTAKDSSETKTSGSAKSVSSISSEAAAK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:04)
Show buried residues

Minimal score value
-4.2008
Maximal score value
4.1823
Average score
-0.1465
Total score value
-34.7244

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.9825
2 I A 2.5786
3 I A 2.3262
4 N A 0.3092
5 T A 1.0620
6 L A 1.3931
7 Q A -0.2337
8 K A -1.2622
9 Y A 0.6764
10 Y A 0.3089
11 C A 0.0000
12 R A -1.7597
13 V A 0.1279
14 R A -1.6029
15 G A -1.9205
16 G A 0.0000
17 R A -2.2655
18 C A -1.2023
19 A A 0.2498
20 V A 1.4968
21 L A 1.9261
22 S A 0.6664
23 C A -0.2507
24 L A -0.1510
25 P A -1.0003
26 K A -2.3717
27 E A 0.0000
28 E A -2.0688
29 Q A -1.6172
30 I A -1.2217
31 G A -1.2573
32 K A -2.5839
33 C A 0.0000
34 S A -1.6917
35 T A -1.5314
36 R A -2.4661
37 G A -1.7374
38 R A -1.9916
39 K A -1.8133
40 C A 0.0000
41 C A 0.0000
42 R A -3.1686
43 R A -4.0241
44 K A -4.2008
45 K A -4.0336
46 E A -3.4592
47 A A -2.0904
48 A A -2.3797
49 A A -2.3759
50 K A -2.4664
51 S A -1.3692
52 S A -0.7449
53 Q A -1.1879
54 T A -0.0486
55 I A 0.8569
56 E A -0.6745
57 I A 1.4131
58 Y A 1.4931
59 K A -0.0520
60 Q A -0.3119
61 A A 0.6195
62 A A 0.9227
63 Y A 1.2516
64 S A 0.6703
65 S A 1.2062
66 Y A 1.8660
67 M A 1.9130
68 G A 1.3923
69 P A 1.6909
70 I A 2.9977
71 A A 2.4772
72 V A 3.1950
73 Y A 3.1333
74 A A 2.1540
75 A A 1.7593
76 Y A 2.4127
77 L A 1.6644
78 K A -0.0825
79 V A 1.3860
80 D A 1.1401
81 A A 1.6013
82 S A 2.1148
83 F A 3.5758
84 F A 4.1823
85 F A 4.1820
86 L A 3.6689
87 A A 2.6325
88 A A 2.7281
89 Y A 3.3077
90 M A 1.7695
91 S A 0.6345
92 C A 1.3106
93 V A 1.0017
94 D A -1.6194
95 T A -1.7154
96 H A -2.2209
97 A A -1.3394
98 K A -1.9532
99 K A -2.0540
100 A A -0.8378
101 A A -0.5572
102 Y A -0.1146
103 Y A 0.5044
104 S A -0.4396
105 N A -0.3369
106 N A 0.2454
107 A A 0.8106
108 S A 0.6603
109 Q A 1.0281
110 F A 2.6782
111 Y A 2.5532
112 I A 2.2579
113 A A 0.0000
114 A A 1.8538
115 Y A 2.1500
116 L A 1.7477
117 G A 0.9671
118 S A 1.1439
119 I A 2.2065
120 S A 0.9712
121 P A 0.0282
122 T A 0.1128
123 Y A 1.1746
124 A A 0.7473
125 K A -0.9783
126 A A -0.0651
127 A A 0.4709
128 Y A 0.8679
129 M A 0.4586
130 H A -0.2707
131 A A 0.5549
132 S A 0.4192
133 S A 0.7101
134 L A 1.6385
135 S A 0.7996
136 S A 0.9499
137 M A 2.0293
138 Y A 2.4965
139 A A 2.0776
140 A A 2.0910
141 Y A 3.1891
142 I A 3.3538
143 S A 2.0755
144 V A 2.3137
145 P A 0.5731
146 S A -0.3569
147 Q A -1.3535
148 P A -0.8884
149 S A -0.5457
150 G A 0.0096
151 F A 1.2777
152 G A 0.0713
153 P A -0.6575
154 G A -0.9576
155 P A -1.2597
156 G A -1.4553
157 E A -1.5024
158 S A 0.2789
159 I A 2.2942
160 I A 2.3779
161 T A 0.8396
162 S A -0.6024
163 D A -2.1358
164 P A -1.9647
165 E A -2.4115
166 W A -1.0102
167 D A -2.0268
168 G A -1.3667
169 P A -1.2724
170 G A -1.3998
171 P A -0.9200
172 G A -1.1490
173 D A -1.1704
174 I A 0.9382
175 A A 0.2460
176 S A 0.1514
177 S A 0.2722
178 S A 0.4144
179 V A 1.4103
180 S A 0.3980
181 S A -0.2252
182 S A -0.9074
183 S A -1.8498
184 K A -3.2429
185 K A -3.8071
186 K A -3.9901
187 H A -3.3287
188 N A -3.0186
189 R A -2.5602
190 V A -0.5701
191 D A -1.8046
192 G A -1.1924
193 S A -0.7641
194 T A -0.3680
195 S A -0.3119
196 A A -0.4093
197 S A -0.5916
198 H A -0.6574
199 L A 0.2076
200 D A -0.6833
201 M A 0.1805
202 S A -0.4870
203 T A -1.1481
204 N A -2.4899
205 K A -3.4849
206 K A -3.5587
207 N A -2.7167
208 S A -1.5255
209 G A -1.1767
210 S A -0.5102
211 T A -0.8420
212 A A -1.2631
213 K A -2.7360
214 D A -2.8842
215 S A -1.9916
216 S A -1.7795
217 E A -2.4423
218 T A -1.9151
219 K A -2.3457
220 T A -1.3549
221 S A -0.9481
222 G A -1.0419
223 S A -0.8900
224 A A -0.8712
225 K A -1.4342
226 S A -0.2459
227 V A 1.3144
228 S A 0.9770
229 S A 0.9308
230 I A 1.6887
231 S A 0.1222
232 S A -0.8289
233 E A -1.7321
234 A A -0.8593
235 A A -0.6982
236 A A -0.7425
237 K A -1.6572
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Laboratory of Theory of Biopolymers 2018