Project name: 5_rank

Status: done

Started: 2026-04-28 14:04:17
Settings
Chain sequence(s) B: SLEAKVYELMEKMYFDPWEAWKIAGGSRRVTHMTGKEVYEIAKKAAEEELEKEK
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:39)
Show buried residues

Minimal score value
-4.9443
Maximal score value
1.0735
Average score
-1.5786
Total score value
-85.2468

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S B -0.5602
2 L B -0.9916
3 E B -1.7200
4 A B -0.8318
5 K B -1.3673
6 V B 0.0000
7 Y B -0.5452
8 E B -2.0170
9 L B 0.0000
10 M B -1.0445
11 E B -1.8433
12 K B -1.4120
13 M B 0.0000
14 Y B -0.1100
15 F B 1.0735
16 D B 0.0034
17 P B 0.0909
18 W B 0.7629
19 E B -0.1879
20 A B 0.0000
21 W B -0.3296
22 K B -1.1031
23 I B -0.5534
24 A B 0.0000
25 G B -1.2167
26 G B -1.0970
27 S B -1.4399
28 R B -2.5754
29 R B -2.6186
30 V B 0.0000
31 T B -0.9701
32 H B -1.9180
33 M B -1.7103
34 T B -1.3237
35 G B -1.8440
36 K B -2.7355
37 E B -2.6552
38 V B 0.0000
39 Y B -1.8648
40 E B -2.9530
41 I B -1.7472
42 A B 0.0000
43 K B -2.8335
44 K B -3.4650
45 A B -2.5304
46 A B 0.0000
47 E B -4.1711
48 E B -4.7692
49 E B -4.4565
50 L B -3.5780
51 E B -4.9101
52 K B -4.9443
53 E B -4.4519
54 K B -3.7812
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Laboratory of Theory of Biopolymers 2018