| Chain sequence(s) |
B: SLEAKVYELMEKMYFDPWEAWKIAGGSRRVTHMTGKEVYEIAKKAAEEELEKEK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:38)
[INFO] Main: Simulation completed successfully. (00:02:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.5602 | |
| 2 | L | B | -0.9916 | |
| 3 | E | B | -1.7200 | |
| 4 | A | B | -0.8318 | |
| 5 | K | B | -1.3673 | |
| 6 | V | B | 0.0000 | |
| 7 | Y | B | -0.5452 | |
| 8 | E | B | -2.0170 | |
| 9 | L | B | 0.0000 | |
| 10 | M | B | -1.0445 | |
| 11 | E | B | -1.8433 | |
| 12 | K | B | -1.4120 | |
| 13 | M | B | 0.0000 | |
| 14 | Y | B | -0.1100 | |
| 15 | F | B | 1.0735 | |
| 16 | D | B | 0.0034 | |
| 17 | P | B | 0.0909 | |
| 18 | W | B | 0.7629 | |
| 19 | E | B | -0.1879 | |
| 20 | A | B | 0.0000 | |
| 21 | W | B | -0.3296 | |
| 22 | K | B | -1.1031 | |
| 23 | I | B | -0.5534 | |
| 24 | A | B | 0.0000 | |
| 25 | G | B | -1.2167 | |
| 26 | G | B | -1.0970 | |
| 27 | S | B | -1.4399 | |
| 28 | R | B | -2.5754 | |
| 29 | R | B | -2.6186 | |
| 30 | V | B | 0.0000 | |
| 31 | T | B | -0.9701 | |
| 32 | H | B | -1.9180 | |
| 33 | M | B | -1.7103 | |
| 34 | T | B | -1.3237 | |
| 35 | G | B | -1.8440 | |
| 36 | K | B | -2.7355 | |
| 37 | E | B | -2.6552 | |
| 38 | V | B | 0.0000 | |
| 39 | Y | B | -1.8648 | |
| 40 | E | B | -2.9530 | |
| 41 | I | B | -1.7472 | |
| 42 | A | B | 0.0000 | |
| 43 | K | B | -2.8335 | |
| 44 | K | B | -3.4650 | |
| 45 | A | B | -2.5304 | |
| 46 | A | B | 0.0000 | |
| 47 | E | B | -4.1711 | |
| 48 | E | B | -4.7692 | |
| 49 | E | B | -4.4565 | |
| 50 | L | B | -3.5780 | |
| 51 | E | B | -4.9101 | |
| 52 | K | B | -4.9443 | |
| 53 | E | B | -4.4519 | |
| 54 | K | B | -3.7812 |