Project name: 1349

Status: done

Started: 2025-06-25 14:10:42
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Chain sequence(s) H: EVQLLESGGGSVQPGGSLRLSCAASGVTYSHYWLAWFRQAPGKEREGVAAIYTNDGTTYYGDSVKGRFTISLDNSKNTLYLQMSSLTAEDTAVYYCALRINDGSWFSPLQPYHYNYRGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-3.311
Maximal score value
1.4939
Average score
-0.69
Total score value
-87.6259

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9293
2 V H -1.4067
3 Q H -1.4090
4 L H 0.0000
5 L H 0.3511
6 E H 0.0000
7 S H -0.3982
8 G H -0.7568
9 G H -0.7871
11 G H -0.6312
12 S H -0.6161
13 V H -0.6888
14 Q H -1.5239
15 P H -1.3488
16 G H -1.0192
17 G H -0.8799
18 S H -0.8146
19 L H -0.6938
20 R H -1.2148
21 L H 0.0000
22 S H -0.1331
23 C H 0.0000
24 A H -0.2676
25 A H 0.0000
26 S H -0.7096
27 G H -0.8686
28 V H -0.4134
29 T H 0.0812
30 Y H 0.1501
35 S H -0.8143
36 H H -1.3234
37 Y H 0.0000
38 W H 0.0000
39 L H 0.0000
40 A H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7023
45 A H -1.6499
46 P H -1.2511
47 G H -1.8106
48 K H -3.1920
49 E H -3.3110
50 R H -2.1166
51 E H -2.1177
52 G H -1.1004
53 V H 0.0000
54 A H 0.0000
55 A H 0.0000
56 I H 0.0000
57 Y H -0.5607
58 T H -1.1721
59 N H -1.7166
62 D H -2.2655
63 G H -1.2459
64 T H -0.5852
65 T H -0.1237
66 Y H 0.1070
67 Y H -0.6867
68 G H -1.4033
69 D H -2.4088
70 S H -1.8364
71 V H 0.0000
72 K H -2.5816
74 G H -1.7278
75 R H -1.3182
76 F H 0.0000
77 T H -0.6976
78 I H 0.0000
79 S H -0.2375
80 L H -0.6377
81 D H -1.5383
82 N H -2.2634
83 S H -1.8716
84 K H -2.5921
85 N H -2.0466
86 T H -1.1002
87 L H 0.0000
88 Y H -0.0970
89 L H 0.0000
90 Q H -0.8655
91 M H 0.0000
92 S H -0.7880
93 S H -0.8211
94 L H 0.0000
95 T H -1.0577
96 A H -1.1570
97 E H -1.8611
98 D H 0.0000
99 T H -0.7172
100 A H 0.0000
101 V H -0.1462
102 Y H 0.0000
103 Y H -0.4534
104 C H 0.0000
105 A H 0.0000
106 L H 0.0000
107 R H 0.0000
108 I H -0.2075
109 N H -1.2028
110 D H -1.2039
111 G H -0.7260
111A S H 0.1723
111B W H 1.2905
111C F H 1.4939
112D S H 0.9092
112C P H 0.0000
112B L H 0.2717
112A Q H -0.4461
112 P H -0.5019
113 Y H 0.7073
114 H H -0.0920
115 Y H 0.0000
116 N H -0.9012
117 Y H -0.6568
118 R H -1.3258
119 G H -0.8566
120 Q H -1.2786
121 G H -0.6453
122 T H -0.4961
123 Q H -0.7644
124 V H 0.0000
125 T H -0.7148
126 V H 0.0000
127 S H -0.9236
128 S H -0.7353
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Laboratory of Theory of Biopolymers 2018