Project name: query_structure

Status: done

Started: 2026-03-16 19:57:41
Settings
Chain sequence(s) A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCLPNEFRCSNGQCIPPNWRCDGVDDCRDGSDEAGCSQDPEFHKV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:35)
Show buried residues

Minimal score value
-3.5621
Maximal score value
0.7143
Average score
-1.2159
Total score value
-103.355

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A -0.4798
2 G A -0.9241
3 P A -1.0206
4 G A -1.4713
5 R A -1.9662
6 F A -1.1846
7 Q A -2.0475
8 C A 0.0000
9 E A -2.5670
10 S A -1.5305
11 G A -1.5416
12 Q A -1.5524
13 C A -1.3644
14 I A 0.0000
15 P A -0.6450
16 A A -0.6623
17 T A -0.1760
18 W A -0.5250
19 V A -0.8276
20 C A -1.1974
21 D A -2.3127
22 G A -2.3013
23 E A -3.2727
24 N A -2.8272
25 D A -1.6643
26 C A 0.0000
27 V A 0.4970
28 D A -0.9758
29 D A -1.8685
30 S A 0.0000
31 D A 0.0000
32 E A -2.2267
33 K A -2.3078
34 S A -0.9366
35 C A -0.5481
36 A A -0.2094
37 T A -0.2958
38 T A 0.0882
39 A A -0.1921
40 P A -0.4199
41 T A -0.4563
42 C A 0.0000
43 L A 0.4611
44 P A -0.4836
45 N A -1.4966
46 E A -1.5091
47 F A -1.5115
48 R A -2.5140
49 C A 0.0000
50 S A -1.9326
51 N A -2.4621
52 G A -1.9690
53 Q A -2.4213
54 C A -1.2569
55 I A 0.0000
56 P A -0.9467
57 P A -1.6603
58 N A -1.8454
59 W A -0.5799
60 R A -1.6129
61 C A 0.0000
62 D A -1.3608
63 G A -0.6641
64 V A 0.1662
65 D A -2.0373
66 D A -1.7068
67 C A 0.0000
68 R A -3.3696
69 D A -3.5621
70 G A -2.3143
71 S A -2.1976
72 D A 0.0000
73 E A -1.2207
74 A A -1.1218
75 G A -0.9875
76 C A -1.4597
77 S A -1.0889
78 Q A -1.8208
79 D A -1.7588
80 P A -1.6490
81 E A -2.6718
82 F A -1.9465
83 H A -1.8574
84 K A -1.7859
85 V A 0.7143
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Laboratory of Theory of Biopolymers 2018