| Chain sequence(s) |
H: EVKLEESGGGLVQPGGSMKLSCVASGFIFSNHWMNWVRQSPEKGLEWVAEIRSKSINSATHYAESVKGRFTISRDDSKSAVYLQMTDLRTEDTGVYYCSRNYYGSTYDYWGQGTTLTVSS
L: DILLTQSPAILSVSPGERVSFSCRASQFVGSSIHWYQQRTNGSPRLLIKYASESMSGIPSRFSGSGSGTDFTLSINTVESEDIADYYCQQSHSWPFTFGSGTNLEVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:04)
[INFO] Main: Simulation completed successfully. (00:02:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1459 | |
| 2 | V | H | -1.3240 | |
| 3 | K | H | -2.0599 | |
| 4 | L | H | 0.0000 | |
| 5 | E | H | -2.1398 | |
| 6 | E | H | -1.2265 | |
| 7 | S | H | -1.0733 | |
| 8 | G | H | -1.0341 | |
| 9 | G | H | -0.4448 | |
| 11 | G | H | 0.4215 | |
| 12 | L | H | 1.1968 | |
| 13 | V | H | -0.0387 | |
| 14 | Q | H | -1.4411 | |
| 15 | P | H | -1.7409 | |
| 16 | G | H | -1.6467 | |
| 17 | G | H | -1.1013 | |
| 18 | S | H | -1.2929 | |
| 19 | M | H | -0.9403 | |
| 20 | K | H | -1.9796 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.6437 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.1014 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8232 | |
| 27 | G | H | -0.8415 | |
| 28 | F | H | 0.3796 | |
| 29 | I | H | 1.5899 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.6546 | |
| 36 | N | H | -0.8088 | |
| 37 | H | H | 0.1547 | |
| 38 | W | H | 0.0680 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5626 | |
| 45 | S | H | 0.0000 | |
| 46 | P | H | -1.3546 | |
| 47 | E | H | -2.5437 | |
| 48 | K | H | -1.9850 | |
| 49 | G | H | -1.1191 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.5212 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -0.6609 | |
| 58 | S | H | 0.0000 | |
| 59 | K | H | -2.2092 | |
| 60 | S | H | -1.0181 | |
| 61 | I | H | -0.0590 | |
| 62 | N | H | -1.4258 | |
| 63 | S | H | -1.1636 | |
| 64 | A | H | -0.5836 | |
| 65 | T | H | -0.2348 | |
| 66 | H | H | -0.6283 | |
| 67 | Y | H | -1.0172 | |
| 68 | A | H | -1.3755 | |
| 69 | E | H | -2.5456 | |
| 70 | S | H | -1.8312 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5932 | |
| 74 | G | H | -1.7227 | |
| 75 | R | H | -1.6766 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8680 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3769 | |
| 80 | R | H | -0.8790 | |
| 81 | D | H | -1.1789 | |
| 82 | D | H | -1.4019 | |
| 83 | S | H | -1.4421 | |
| 84 | K | H | -1.8665 | |
| 85 | S | H | -0.5534 | |
| 86 | A | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3266 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3688 | |
| 91 | M | H | 0.0000 | |
| 92 | T | H | -1.3439 | |
| 93 | D | H | -1.7564 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.4973 | |
| 96 | T | H | -1.8458 | |
| 97 | E | H | -2.6259 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6694 | |
| 100 | G | H | -0.5622 | |
| 101 | V | H | 0.1868 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | N | H | 0.0000 | |
| 108 | Y | H | 1.9129 | |
| 109 | Y | H | 1.7187 | |
| 110 | G | H | 0.8106 | |
| 113 | S | H | 0.0000 | |
| 114 | T | H | 0.0000 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | 0.1184 | |
| 117 | Y | H | 0.2142 | |
| 118 | W | H | -0.7305 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -2.0538 | |
| 121 | G | H | -1.0188 | |
| 122 | T | H | -0.6923 | |
| 123 | T | H | 0.1092 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.0229 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7536 | |
| 128 | S | H | -0.5685 | |
| 1 | D | L | -1.4973 | |
| 2 | I | L | 0.0000 | |
| 3 | L | L | 0.6787 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2517 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.1792 | |
| 8 | P | L | 0.2612 | |
| 9 | A | L | 0.5087 | |
| 10 | I | L | 1.0651 | |
| 11 | L | L | 0.4225 | |
| 12 | S | L | -0.4899 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -2.0016 | |
| 15 | P | L | -2.0213 | |
| 16 | G | L | -2.3081 | |
| 17 | E | L | -3.1334 | |
| 18 | R | L | -3.1521 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8431 | |
| 21 | F | L | 0.0000 | |
| 22 | S | L | -0.6322 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.3446 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.4142 | |
| 27 | Q | L | -0.4190 | |
| 28 | F | L | 0.9545 | |
| 29 | V | L | 0.0000 | |
| 36 | G | L | 0.0961 | |
| 37 | S | L | -0.0905 | |
| 38 | S | L | 0.0626 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2582 | |
| 45 | R | L | -1.5449 | |
| 46 | T | L | -0.9882 | |
| 47 | N | L | -1.7187 | |
| 48 | G | L | -1.5616 | |
| 49 | S | L | -1.2659 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.7777 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.5197 | |
| 56 | Y | L | -0.0050 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.8051 | |
| 66 | E | L | -1.1848 | |
| 67 | S | L | -0.7914 | |
| 68 | M | L | -0.4369 | |
| 69 | S | L | -0.4640 | |
| 70 | G | L | -0.4744 | |
| 71 | I | L | -0.3741 | |
| 72 | P | L | -0.4076 | |
| 74 | S | L | -0.6389 | |
| 75 | R | L | -1.2829 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7426 | |
| 78 | G | L | -0.5562 | |
| 79 | S | L | -0.6637 | |
| 80 | G | L | -0.8281 | |
| 83 | S | L | -0.4984 | |
| 84 | G | L | -0.1956 | |
| 85 | T | L | -0.7271 | |
| 86 | D | L | -1.5414 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6437 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.4419 | |
| 93 | T | L | -2.3928 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.6895 | |
| 96 | S | L | -1.9415 | |
| 97 | E | L | -2.1580 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.4826 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.6498 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | -0.1844 | |
| 108 | H | L | -0.2527 | |
| 109 | S | L | -0.3113 | |
| 114 | W | L | -0.1525 | |
| 115 | P | L | -0.5713 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.0356 | |
| 118 | F | L | 0.3164 | |
| 119 | G | L | 0.0000 | |
| 120 | S | L | -0.4792 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | N | L | -0.3471 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0395 | |
| 126 | V | L | -1.4762 | |
| 127 | K | L | -1.9662 |