| Chain sequence(s) |
A: RADARADARADARADA
B: RADARADARADARADA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -3.1498 | |
| 2 | A | A | -2.4834 | |
| 3 | D | A | -3.1541 | |
| 4 | A | A | 0.0000 | |
| 5 | R | A | -3.7622 | |
| 6 | A | A | -2.8064 | |
| 7 | D | A | -3.4826 | |
| 8 | A | A | 0.0000 | |
| 9 | R | A | -3.6130 | |
| 10 | A | A | -2.8156 | |
| 11 | D | A | -3.5667 | |
| 12 | A | A | 0.0000 | |
| 13 | R | A | -3.1678 | |
| 14 | A | A | -2.2917 | |
| 15 | D | A | -2.6951 | |
| 16 | A | A | -1.7073 | |
| 1 | R | B | -3.1918 | |
| 2 | A | B | -2.5644 | |
| 3 | D | B | -3.2299 | |
| 4 | A | B | 0.0000 | |
| 5 | R | B | -4.0305 | |
| 6 | A | B | -2.9622 | |
| 7 | D | B | -3.5535 | |
| 8 | A | B | 0.0000 | |
| 9 | R | B | -3.7192 | |
| 10 | A | B | -2.8576 | |
| 11 | D | B | -3.5090 | |
| 12 | A | B | 0.0000 | |
| 13 | R | B | -3.0897 | |
| 14 | A | B | -2.2465 | |
| 15 | D | B | -2.6528 | |
| 16 | A | B | -1.6854 |