Project name: GGGHKFF12

Status: done

Started: 2026-02-23 06:57:02
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Chain sequence(s) A: GGGHKFF
C: GGGHKFF
B: GGGHKFF
E: GGGHKFF
D: GGGHKFF
G: GGGHKFF
F: GGGHKFF
I: GGGHKFF
H: GGGHKFF
K: GGGHKFF
J: GGGHKFF
L: GGGHKFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:29)
Show buried residues

Minimal score value
-2.023
Maximal score value
3.1487
Average score
-0.6455
Total score value
-54.2215

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9635
2 G A -1.3607
3 G A -1.4038
4 H A -1.6564
5 K A -1.3892
6 F A 0.9452
7 F A 0.4596
1 G B -0.8925
2 G B -1.1786
3 G B -1.7476
4 H B -1.5920
5 K B -1.3695
6 F B 0.0000
7 F B 1.2049
1 G C -0.7262
2 G C -0.6452
3 G C -0.4671
4 H C 0.0000
5 K C 0.0553
6 F C 0.2815
7 F C 0.0000
1 G D -1.0586
2 G D -1.0154
3 G D -1.0338
4 H D -0.3539
5 K D 0.0000
6 F D 0.4363
7 F D -0.6687
1 G E -1.0882
2 G E -1.4476
3 G E -1.7609
4 H E -1.4222
5 K E -0.5422
6 F E 0.0000
7 F E 1.5378
1 G F -1.0795
2 G F -1.6039
3 G F -1.7795
4 H F -1.4890
5 K F -1.0384
6 F F 0.0000
7 F F 2.5898
1 G G -1.0240
2 G G -1.4348
3 G G -1.7771
4 H G -1.8752
5 K G -1.3967
6 F G 0.0000
7 F G 1.9401
1 G H -1.1242
2 G H -1.5486
3 G H -1.8825
4 H H -1.9619
5 K H -1.7948
6 F H 0.0000
7 F H 0.0000
1 G I -1.2152
2 G I -1.5568
3 G I -1.6023
4 H I -1.6083
5 K I -1.4701
6 F I 0.0000
7 F I 1.0596
1 G J -0.8923
2 G J -1.4216
3 G J -1.5761
4 H J -1.2982
5 K J -0.1030
6 F J 0.0000
7 F J 3.1487
1 G K -1.0214
2 G K -1.3958
3 G K -2.0230
4 H K -1.9007
5 K K -1.2782
6 F K 0.0000
7 F K 2.4289
1 G L -0.9513
2 G L -1.4403
3 G L -1.4953
4 H L -1.4885
5 K L -0.9918
6 F L 1.9816
7 F L 3.0333
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Laboratory of Theory of Biopolymers 2018