| Chain sequence(s) |
A: EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHKCF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:58)
[INFO] Main: Simulation completed successfully. (00:07:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 4 | E | A | -0.9457 | |
| 5 | V | A | 0.5830 | |
| 6 | A | A | 0.0828 | |
| 7 | A | A | 0.0000 | |
| 8 | L | A | 0.0000 | |
| 9 | V | A | 0.0000 | |
| 10 | I | A | 0.0000 | |
| 11 | D | A | 0.0000 | |
| 12 | N | A | 0.0000 | |
| 13 | G | A | -0.2977 | |
| 14 | S | A | 0.0000 | |
| 15 | G | A | -0.4963 | |
| 16 | M | A | 0.2566 | |
| 17 | C | A | 0.0000 | |
| 18 | K | A | -0.1673 | |
| 19 | A | A | 0.0000 | |
| 20 | G | A | 0.0000 | |
| 21 | F | A | -0.4339 | |
| 22 | A | A | -0.0707 | |
| 23 | G | A | -0.7839 | |
| 24 | D | A | -1.6101 | |
| 25 | D | A | -2.0799 | |
| 26 | A | A | -1.4098 | |
| 27 | P | A | 0.0000 | |
| 28 | R | A | -2.0501 | |
| 29 | A | A | -0.6972 | |
| 30 | V | A | -0.0069 | |
| 31 | F | A | 0.0000 | |
| 32 | P | A | -0.3739 | |
| 33 | S | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | V | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | R | A | -2.5407 | |
| 38 | P | A | -2.7525 | |
| 39 | R | A | -2.8060 | |
| 40 | H | A | -2.6343 | |
| 41 | Q | A | -2.5477 | |
| 42 | G | A | -0.3243 | |
| 43 | I | A | 1.9324 | |
| 44 | M | A | 2.0375 | |
| 45 | V | A | 2.1304 | |
| 46 | G | A | 0.9326 | |
| 47 | M | A | 1.1981 | |
| 48 | G | A | 0.0000 | |
| 49 | Q | A | -1.5636 | |
| 50 | K | A | -2.9492 | |
| 51 | D | A | -3.6896 | |
| 52 | S | A | -2.2660 | |
| 53 | Y | A | 0.0000 | |
| 54 | V | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | D | A | -2.5613 | |
| 57 | E | A | -2.5570 | |
| 58 | A | A | 0.0000 | |
| 59 | Q | A | -1.8181 | |
| 60 | S | A | -1.7397 | |
| 61 | K | A | -1.7407 | |
| 62 | R | A | -1.2525 | |
| 63 | G | A | -0.7651 | |
| 64 | I | A | -0.3899 | |
| 65 | L | A | 0.0000 | |
| 66 | T | A | -1.2415 | |
| 67 | L | A | -0.9444 | |
| 68 | R | A | -1.5373 | |
| 69 | Y | A | -0.6183 | |
| 70 | P | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | E | A | -1.7195 | |
| 73 | H | A | -1.4682 | |
| 74 | G | A | -0.6722 | |
| 75 | I | A | -0.3566 | |
| 76 | V | A | -0.2766 | |
| 77 | T | A | -0.5256 | |
| 78 | N | A | -0.9847 | |
| 79 | W | A | -1.0943 | |
| 80 | D | A | -2.1340 | |
| 81 | D | A | 0.0000 | |
| 82 | M | A | 0.0000 | |
| 83 | E | A | -1.7337 | |
| 84 | K | A | -1.6288 | |
| 85 | I | A | 0.0000 | |
| 86 | W | A | 0.0000 | |
| 87 | H | A | -1.0522 | |
| 88 | H | A | -1.1204 | |
| 89 | T | A | 0.0000 | |
| 90 | F | A | 0.0000 | |
| 91 | Y | A | -0.8129 | |
| 92 | N | A | -1.4873 | |
| 93 | E | A | -1.5383 | |
| 94 | L | A | 0.0000 | |
| 95 | R | A | -1.9076 | |
| 96 | V | A | -1.1449 | |
| 97 | A | A | -1.3688 | |
| 98 | P | A | 0.0000 | |
| 99 | E | A | -2.8401 | |
| 100 | E | A | -2.3873 | |
| 101 | H | A | 0.0000 | |
| 102 | P | A | -0.5701 | |
| 103 | V | A | 0.0000 | |
| 104 | L | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | T | A | 0.0000 | |
| 107 | E | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | P | A | 0.0000 | |
| 110 | M | A | 0.2403 | |
| 111 | N | A | -0.2943 | |
| 112 | P | A | -1.0082 | |
| 113 | K | A | -2.2083 | |
| 114 | S | A | -1.6259 | |
| 115 | N | A | -1.3186 | |
| 116 | R | A | -1.5008 | |
| 117 | E | A | -1.6361 | |
| 118 | K | A | -1.4807 | |
| 119 | M | A | 0.0000 | |
| 120 | T | A | 0.0000 | |
| 121 | Q | A | -1.5197 | |
| 122 | I | A | -1.2059 | |
| 123 | M | A | 0.0000 | |
| 124 | F | A | 0.0000 | |
| 125 | E | A | -2.6123 | |
| 126 | T | A | -1.6598 | |
| 127 | F | A | 0.0000 | |
| 128 | N | A | -2.8256 | |
| 129 | V | A | 0.0000 | |
| 130 | P | A | -1.6886 | |
| 131 | A | A | -1.1927 | |
| 132 | F | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | V | A | 0.0000 | |
| 135 | S | A | 0.0000 | |
| 136 | I | A | 0.7429 | |
| 137 | Q | A | 0.1352 | |
| 138 | A | A | 0.0000 | |
| 139 | V | A | 0.6430 | |
| 140 | L | A | 0.0000 | |
| 141 | S | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | Y | A | 0.4666 | |
| 144 | S | A | 0.2016 | |
| 145 | S | A | -0.2974 | |
| 146 | G | A | -0.5102 | |
| 147 | R | A | -0.5263 | |
| 148 | T | A | -0.1077 | |
| 149 | T | A | -0.1343 | |
| 150 | G | A | 0.0000 | |
| 151 | I | A | 0.0000 | |
| 152 | V | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | D | A | -0.5605 | |
| 155 | S | A | 0.0000 | |
| 156 | G | A | -0.7776 | |
| 157 | D | A | -1.4119 | |
| 158 | G | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | T | A | 0.0000 | |
| 161 | H | A | 0.0000 | |
| 162 | V | A | 0.0000 | |
| 163 | V | A | 0.0000 | |
| 164 | P | A | 0.0000 | |
| 165 | I | A | 0.0000 | |
| 166 | Y | A | 0.3808 | |
| 167 | A | A | 0.2122 | |
| 168 | G | A | 0.2558 | |
| 169 | F | A | 1.2131 | |
| 170 | S | A | 0.6693 | |
| 171 | L | A | -0.1603 | |
| 172 | P | A | -0.3603 | |
| 173 | H | A | -1.2835 | |
| 174 | A | A | 0.0000 | |
| 175 | I | A | 0.0000 | |
| 176 | L | A | -0.6368 | |
| 177 | R | A | -1.1594 | |
| 178 | I | A | 0.0000 | |
| 179 | D | A | -1.5471 | |
| 180 | L | A | 0.0000 | |
| 181 | A | A | 0.0000 | |
| 182 | G | A | 0.0000 | |
| 183 | R | A | -2.0077 | |
| 184 | D | A | -1.6367 | |
| 185 | L | A | 0.0000 | |
| 186 | T | A | 0.0000 | |
| 187 | D | A | -2.0217 | |
| 188 | Y | A | -0.9950 | |
| 189 | L | A | 0.0000 | |
| 190 | M | A | -1.6980 | |
| 191 | K | A | -2.2811 | |
| 192 | I | A | 0.0000 | |
| 193 | L | A | 0.0000 | |
| 194 | S | A | -1.9293 | |
| 195 | E | A | -2.8555 | |
| 196 | R | A | -2.3262 | |
| 197 | G | A | -1.4988 | |
| 198 | Y | A | -0.8643 | |
| 199 | S | A | -0.9315 | |
| 200 | F | A | 0.0000 | |
| 201 | S | A | -0.9248 | |
| 202 | T | A | -0.5798 | |
| 203 | T | A | -0.8214 | |
| 204 | A | A | -0.7551 | |
| 205 | E | A | -1.1473 | |
| 206 | R | A | -1.6270 | |
| 207 | E | A | -1.4944 | |
| 208 | I | A | -1.1552 | |
| 209 | V | A | 0.0000 | |
| 210 | R | A | -2.8487 | |
| 211 | D | A | -2.3760 | |
| 212 | I | A | 0.0000 | |
| 213 | K | A | -2.2070 | |
| 214 | E | A | -3.1597 | |
| 215 | K | A | -2.9298 | |
| 216 | L | A | 0.0000 | |
| 217 | C | A | 0.0000 | |
| 218 | Y | A | -0.4873 | |
| 219 | V | A | 0.0000 | |
| 220 | A | A | 0.0000 | |
| 221 | L | A | -0.5293 | |
| 222 | D | A | -1.2871 | |
| 223 | F | A | -1.3122 | |
| 224 | E | A | -2.6138 | |
| 225 | Q | A | -2.4869 | |
| 226 | E | A | -1.6929 | |
| 227 | M | A | -1.5992 | |
| 228 | Q | A | -2.0632 | |
| 229 | T | A | -1.5626 | |
| 230 | A | A | -1.1779 | |
| 231 | A | A | -1.1987 | |
| 232 | Q | A | -1.5395 | |
| 233 | S | A | -1.1198 | |
| 234 | S | A | -1.0815 | |
| 235 | S | A | -0.9544 | |
| 236 | I | A | 0.0000 | |
| 237 | E | A | -1.7276 | |
| 238 | K | A | -2.2652 | |
| 239 | S | A | -1.0682 | |
| 240 | Y | A | -1.2122 | |
| 241 | E | A | -1.9825 | |
| 242 | L | A | -1.4825 | |
| 243 | P | A | -1.6310 | |
| 244 | D | A | -2.5242 | |
| 245 | G | A | -1.9981 | |
| 246 | Q | A | -1.6814 | |
| 247 | V | A | -0.2530 | |
| 248 | I | A | 0.0000 | |
| 249 | T | A | -0.7574 | |
| 250 | I | A | 0.0000 | |
| 251 | G | A | 0.0000 | |
| 252 | N | A | -0.8766 | |
| 253 | E | A | 0.0000 | |
| 254 | R | A | -1.0135 | |
| 255 | F | A | 0.0000 | |
| 256 | R | A | -0.3210 | |
| 257 | A | A | 0.0000 | |
| 258 | P | A | 0.0000 | |
| 259 | E | A | 0.0000 | |
| 260 | A | A | 0.0000 | |
| 261 | L | A | 0.0000 | |
| 262 | F | A | 0.0000 | |
| 263 | H | A | -0.8882 | |
| 264 | P | A | 0.0000 | |
| 265 | S | A | -0.4403 | |
| 266 | V | A | 0.6213 | |
| 267 | L | A | 0.3276 | |
| 268 | G | A | -0.3529 | |
| 269 | L | A | -0.7062 | |
| 270 | E | A | -1.8647 | |
| 271 | S | A | -1.3964 | |
| 272 | A | A | -0.9262 | |
| 273 | G | A | 0.0000 | |
| 274 | I | A | 0.0000 | |
| 275 | D | A | -0.7123 | |
| 276 | Q | A | -0.6866 | |
| 277 | T | A | 0.0000 | |
| 278 | T | A | 0.0000 | |
| 279 | Y | A | -0.2222 | |
| 280 | N | A | -0.5764 | |
| 281 | S | A | 0.0000 | |
| 282 | I | A | 0.0000 | |
| 283 | M | A | -0.5764 | |
| 284 | K | A | -1.7244 | |
| 285 | C | A | 0.0000 | |
| 286 | D | A | -2.0129 | |
| 287 | V | A | -0.6518 | |
| 288 | D | A | -2.1141 | |
| 289 | V | A | 0.0000 | |
| 290 | R | A | -1.8776 | |
| 291 | K | A | -2.9022 | |
| 292 | E | A | -2.2660 | |
| 293 | L | A | 0.0000 | |
| 294 | Y | A | 0.0000 | |
| 295 | G | A | -1.8923 | |
| 296 | N | A | -1.3588 | |
| 297 | I | A | 0.0000 | |
| 298 | V | A | 0.0000 | |
| 299 | M | A | 0.0000 | |
| 300 | S | A | 0.0000 | |
| 301 | G | A | -0.6602 | |
| 302 | G | A | -0.8798 | |
| 303 | T | A | 0.0000 | |
| 304 | T | A | 0.0000 | |
| 305 | M | A | -0.6041 | |
| 306 | F | A | 0.0000 | |
| 307 | P | A | -0.7985 | |
| 308 | G | A | -0.5275 | |
| 309 | I | A | 0.0000 | |
| 310 | A | A | -1.1970 | |
| 311 | E | A | -2.2353 | |
| 312 | R | A | 0.0000 | |
| 313 | M | A | 0.0000 | |
| 314 | Q | A | -1.8123 | |
| 315 | K | A | -1.8061 | |
| 316 | E | A | -1.0482 | |
| 317 | I | A | 0.0000 | |
| 318 | T | A | -0.9083 | |
| 319 | A | A | -0.1704 | |
| 320 | L | A | 0.2585 | |
| 321 | A | A | 0.0000 | |
| 322 | P | A | -0.6061 | |
| 323 | S | A | -0.5541 | |
| 324 | S | A | -0.7174 | |
| 325 | M | A | -1.5097 | |
| 326 | K | A | -2.5118 | |
| 327 | V | A | 0.0000 | |
| 328 | K | A | -2.1417 | |
| 329 | I | A | 0.0000 | |
| 330 | I | A | -0.1922 | |
| 331 | A | A | -0.3716 | |
| 332 | P | A | -0.4838 | |
| 333 | P | A | -0.7939 | |
| 334 | E | A | -1.3164 | |
| 335 | R | A | 0.0000 | |
| 336 | K | A | -1.0356 | |
| 337 | Y | A | -0.4609 | |
| 338 | S | A | 0.0000 | |
| 339 | V | A | 0.0000 | |
| 340 | W | A | 0.0000 | |
| 341 | I | A | -0.1225 | |
| 342 | G | A | 0.0000 | |
| 343 | G | A | 0.0000 | |
| 344 | S | A | 0.0000 | |
| 345 | I | A | 0.5988 | |
| 346 | L | A | 0.6421 | |
| 347 | A | A | 0.0000 | |
| 348 | S | A | 0.0824 | |
| 349 | L | A | 0.3488 | |
| 350 | T | A | -0.2642 | |
| 351 | T | A | -0.3154 | |
| 352 | F | A | 0.0000 | |
| 353 | Q | A | -1.0459 | |
| 354 | Q | A | -1.2481 | |
| 355 | M | A | -0.3387 | |
| 356 | W | A | 0.0000 | |
| 357 | I | A | 0.0000 | |
| 358 | S | A | -1.3374 | |
| 359 | K | A | -2.6655 | |
| 360 | Q | A | -2.9392 | |
| 361 | E | A | -2.5498 | |
| 362 | Y | A | 0.0000 | |
| 363 | D | A | -3.7734 | |
| 364 | E | A | -3.3625 | |
| 365 | S | A | -1.9359 | |
| 366 | G | A | -1.6547 | |
| 367 | P | A | -1.1338 | |
| 368 | S | A | -1.0685 | |
| 369 | I | A | -0.8782 | |
| 370 | V | A | 0.0000 | |
| 371 | H | A | -0.8268 | |
| 372 | H | A | -0.8637 | |
| 373 | K | A | -0.9535 | |
| 374 | C | A | 0.2815 | |
| 375 | F | A | 1.4117 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine