| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPVGHPLPDAPPPSPLYVRPPATSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9409 | |
| 2 | L | A | 1.9652 | |
| 3 | P | A | 0.6648 | |
| 4 | P | A | 0.3609 | |
| 5 | T | A | 0.1161 | |
| 6 | T | A | 0.1307 | |
| 7 | P | A | 0.1480 | |
| 8 | V | A | 1.2275 | |
| 9 | A | A | 0.0744 | |
| 10 | K | A | -1.0351 | |
| 11 | V | A | -0.1984 | |
| 12 | Q | A | -1.4286 | |
| 13 | S | A | -1.5557 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3876 | |
| 16 | E | A | -2.4250 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4657 | |
| 20 | P | A | 0.1334 | |
| 21 | T | A | 0.1600 | |
| 22 | S | A | -0.0940 | |
| 23 | L | A | 0.0991 | |
| 24 | F | A | -0.0255 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3058 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9082 | |
| 31 | R | A | -2.6870 | |
| 32 | L | A | -0.7971 | |
| 33 | L | A | 1.1686 | |
| 34 | T | A | 1.3794 | |
| 35 | V | A | 1.8454 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2762 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6816 | |
| 40 | E | A | -1.8163 | |
| 41 | D | A | -0.7770 | |
| 42 | I | A | 1.3281 | |
| 43 | V | A | 2.2747 | |
| 44 | V | A | 1.8520 | |
| 45 | N | A | -0.4501 | |
| 46 | G | A | -0.2954 | |
| 47 | K | A | -0.0275 | |
| 48 | V | A | 2.1269 | |
| 49 | V | A | 2.7723 | |
| 50 | V | A | 1.5523 | |
| 51 | P | A | 0.3324 | |
| 52 | K | A | -0.7311 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1367 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3754 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2596 | |
| 70 | K | A | -1.7792 | |
| 71 | F | A | -0.6267 | |
| 72 | A | A | -0.5784 | |
| 73 | L | A | -0.8717 | |
| 74 | P | A | -1.2122 | |
| 75 | Q | A | -2.5084 | |
| 76 | K | A | -3.1128 | |
| 77 | D | A | -2.9932 | |
| 78 | F | A | -1.6748 | |
| 79 | Y | A | -1.8926 | |
| 80 | D | A | -2.6975 | |
| 81 | P | A | -2.3095 | |
| 82 | E | A | -3.0535 | |
| 83 | K | A | -3.4015 | |
| 84 | E | A | -2.4654 | |
| 85 | R | A | -1.2936 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6692 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9587 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3573 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6987 | |
| 99 | G | A | -0.5389 | |
| 100 | P | A | -0.4110 | |
| 101 | L | A | 0.0327 | |
| 102 | G | A | -0.2156 | |
| 103 | K | A | -0.6102 | |
| 104 | G | A | -0.4427 | |
| 105 | T | A | -0.4485 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1432 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4195 | |
| 110 | L | A | 0.3201 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1258 | |
| 113 | K | A | -0.4607 | |
| 114 | L | A | -1.0087 | |
| 115 | G | A | -0.7692 | |
| 116 | D | A | -1.1453 | |
| 117 | T | A | -0.8477 | |
| 118 | E | A | -1.7899 | |
| 119 | N | A | -1.9553 | |
| 120 | P | A | -1.4148 | |
| 121 | T | A | -0.7459 | |
| 122 | A | A | -0.5573 | |
| 123 | P | A | -0.3982 | |
| 124 | Q | A | -0.8653 | |
| 125 | H | A | -1.0484 | |
| 126 | P | A | -1.4034 | |
| 127 | G | A | -1.5392 | |
| 128 | A | A | -1.2692 | |
| 129 | D | A | -2.2248 | |
| 130 | D | A | -1.7496 | |
| 131 | R | A | -1.0944 | |
| 132 | V | A | 0.2675 | |
| 133 | A | A | 0.4534 | |
| 134 | F | A | 0.2887 | |
| 135 | S | A | -0.0696 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5416 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2111 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5638 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2017 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1621 | |
| 157 | D | A | 0.3262 | |
| 158 | L | A | 0.7977 | |
| 159 | A | A | 0.1857 | |
| 160 | E | A | -1.4478 | |
| 161 | P | A | -0.2003 | |
| 162 | C | A | 0.1904 | |
| 163 | P | A | -0.1691 | |
| 164 | G | A | -0.0759 | |
| 165 | L | A | 0.5925 | |
| 166 | P | A | -0.1159 | |
| 167 | P | A | -0.3400 | |
| 168 | G | A | -0.4510 | |
| 169 | A | A | -0.0258 | |
| 170 | C | A | 0.6658 | |
| 171 | P | A | 0.5381 | |
| 172 | P | A | 0.8754 | |
| 173 | I | A | 2.0583 | |
| 174 | Q | A | 0.8739 | |
| 175 | L | A | 1.5006 | |
| 176 | V | A | 0.8602 | |
| 177 | N | A | -0.3027 | |
| 178 | S | A | 0.0255 | |
| 179 | V | A | 0.4299 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3833 | |
| 182 | D | A | 0.0841 | |
| 183 | G | A | -0.1601 | |
| 184 | D | A | -0.5348 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0719 | |
| 190 | F | A | 0.0361 | |
| 191 | G | A | -0.1031 | |
| 192 | N | A | -0.2564 | |
| 193 | M | A | -0.1131 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4251 | |
| 197 | E | A | -2.6626 | |
| 198 | L | A | -1.2516 | |
| 199 | Q | A | -2.5790 | |
| 200 | Q | A | -3.3348 | |
| 201 | D | A | -3.5928 | |
| 202 | R | A | -3.3465 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1765 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3539 | |
| 211 | S | A | -1.9046 | |
| 212 | T | A | -1.4300 | |
| 213 | R | A | -2.0769 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1627 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3812 | |
| 220 | L | A | 0.6134 | |
| 221 | K | A | -1.0979 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8113 | |
| 224 | N | A | -1.4878 | |
| 225 | E | A | -1.2288 | |
| 226 | A | A | -0.6125 | |
| 227 | Y | A | -0.3761 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6758 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0765 | |
| 234 | F | A | 0.2656 | |
| 235 | G | A | -0.7989 | |
| 236 | R | A | -2.4626 | |
| 237 | R | A | -2.5732 | |
| 238 | E | A | -1.6617 | |
| 239 | Q | A | 0.0501 | |
| 240 | V | A | 1.5005 | |
| 241 | Y | A | 1.1136 | |
| 242 | A | A | 0.1225 | |
| 243 | R | A | -1.1838 | |
| 244 | H | A | -1.0185 | |
| 245 | F | A | 0.0591 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6235 | |
| 249 | S | A | -1.1226 | |
| 250 | G | A | -0.9625 | |
| 251 | P | A | -0.6906 | |
| 252 | V | A | -0.6204 | |
| 253 | G | A | -0.9182 | |
| 254 | H | A | -1.1825 | |
| 255 | P | A | -0.9615 | |
| 256 | L | A | -0.0579 | |
| 257 | P | A | -0.7971 | |
| 258 | D | A | -1.9080 | |
| 259 | A | A | -0.8003 | |
| 260 | P | A | -0.9979 | |
| 261 | P | A | -0.7043 | |
| 262 | P | A | -0.1650 | |
| 263 | S | A | 0.0116 | |
| 264 | P | A | 0.7075 | |
| 265 | L | A | 1.5817 | |
| 266 | Y | A | 1.2108 | |
| 267 | V | A | 1.1093 | |
| 268 | R | A | -0.8079 | |
| 269 | P | A | -0.1533 | |
| 270 | P | A | -0.4083 | |
| 271 | A | A | -0.0081 | |
| 272 | T | A | 0.1144 | |
| 273 | S | A | 0.1157 | |
| 274 | P | A | 0.2854 | |
| 275 | Y | A | 0.8976 | |
| 276 | A | A | 0.7983 | |
| 277 | V | A | 1.6404 | |
| 278 | P | A | 0.6804 | |
| 279 | P | A | 0.0204 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.2530 | |
| 282 | D | A | -0.7288 | |
| 283 | Y | A | 0.8729 | |
| 284 | F | A | 0.7125 | |
| 285 | G | A | 0.2126 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8954 | |
| 291 | L | A | 1.6307 | |
| 292 | V | A | 0.6414 | |
| 293 | S | A | -0.1607 | |
| 294 | S | A | -0.9628 | |
| 295 | D | A | -1.8430 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0975 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6310 | |
| 301 | R | A | -1.8247 | |
| 302 | P | A | -0.9383 | |
| 303 | F | A | -0.1869 | |
| 304 | W | A | -0.5620 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0865 | |
| 307 | R | A | -2.8345 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2725 | |
| 310 | G | A | -1.2313 | |
| 311 | N | A | -1.2782 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8077 | |
| 319 | N | A | -0.9224 | |
| 320 | E | A | -1.0314 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3453 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0903 | |
| 333 | N | A | 0.5283 | |
| 334 | F | A | 1.7165 | |
| 335 | T | A | 0.8568 | |
| 336 | I | A | 0.4144 | |
| 337 | S | A | -1.0504 | |
| 338 | Q | A | -1.9004 | |
| 339 | Q | A | -1.5992 | |
| 340 | L | A | 0.2437 | |
| 341 | S | A | 0.0214 | |
| 342 | T | A | -0.1667 | |
| 343 | P | A | -0.4701 | |
| 344 | A | A | -0.1682 | |
| 345 | P | A | -0.0354 | |
| 346 | N | A | -0.2904 | |
| 347 | V | A | 1.5066 | |
| 348 | Y | A | 1.3555 | |
| 349 | D | A | -0.1445 | |
| 350 | P | A | -0.7444 | |
| 351 | S | A | -0.6091 | |
| 352 | N | A | -0.4660 | |
| 353 | F | A | -1.1754 | |
| 354 | K | A | -2.0696 | |
| 355 | N | A | -1.8525 | |
| 356 | Y | A | -0.1455 | |
| 357 | L | A | 0.6349 | |
| 358 | R | A | 0.9584 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3825 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0688 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0591 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6922 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3034 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3139 | |
| 376 | L | A | -1.7101 | |
| 377 | D | A | -1.9964 | |
| 378 | P | A | -1.0401 | |
| 379 | G | A | -1.0176 | |
| 380 | V | A | -0.9387 | |
| 381 | L | A | -0.5352 | |
| 382 | A | A | -0.6582 | |
| 383 | H | A | -0.8166 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4200 | |
| 386 | T | A | -0.5594 | |
| 387 | M | A | -0.3081 | |
| 388 | N | A | -0.8686 | |
| 389 | P | A | -1.2469 | |
| 390 | T | A | -1.4307 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4159 | |
| 393 | E | A | -2.7354 | |
| 394 | N | A | -2.3312 | |
| 395 | W | A | -1.3277 | |
| 396 | N | A | -1.0365 | |
| 397 | L | A | -0.1572 | |
| 398 | G | A | 0.5497 | |
| 399 | F | A | 2.4235 | |
| 400 | V | A | 1.8402 | |
| 401 | P | A | 0.0558 | |
| 402 | P | A | -1.8321 | |
| 403 | K | A | -3.3104 | |
| 404 | E | A | -3.7758 | |
| 405 | R | A | -3.9039 | |
| 406 | E | A | -3.7928 | |
| 407 | D | A | -2.8819 | |
| 408 | P | A | -1.7719 | |
| 409 | Y | A | -0.9940 | |
| 410 | K | A | -2.1225 | |
| 411 | G | A | -0.6346 | |
| 412 | L | A | 0.6774 | |
| 413 | I | A | 1.5898 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3876 | |
| 416 | E | A | -1.6768 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9518 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0617 | |
| 421 | E | A | -2.8074 | |
| 422 | R | A | -2.6865 | |
| 423 | F | A | -1.2994 | |
| 424 | S | A | -1.4723 | |
| 425 | Q | A | -1.8428 | |
| 426 | D | A | -2.8909 | |
| 427 | L | A | -1.9832 | |
| 428 | D | A | -2.7748 | |
| 429 | Q | A | -2.6163 | |
| 430 | F | A | -1.4252 | |
| 431 | A | A | -0.8953 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5673 | |
| 435 | K | A | -0.7082 | |
| 436 | F | A | 0.1407 | |
| 437 | L | A | 1.0306 | |
| 438 | Y | A | 0.8266 | |
| 439 | Q | A | -0.2749 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine