| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGGGWLWCVTSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6989 | |
| 2 | S | A | 0.1845 | |
| 3 | D | A | -0.2640 | |
| 4 | V | A | -1.1027 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5789 | |
| 7 | D | A | -3.5879 | |
| 8 | L | A | -2.2440 | |
| 9 | E | A | -2.1216 | |
| 10 | V | A | 0.1004 | |
| 11 | V | A | 1.5321 | |
| 12 | A | A | 0.8715 | |
| 13 | A | A | 0.2844 | |
| 14 | T | A | -0.5511 | |
| 15 | P | A | -1.1630 | |
| 16 | T | A | -1.0101 | |
| 17 | S | A | -0.5557 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6964 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1499 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.4274 | |
| 24 | A | A | -1.7665 | |
| 25 | P | A | -0.6094 | |
| 26 | A | A | 0.1089 | |
| 27 | V | A | 0.3008 | |
| 28 | T | A | -0.3883 | |
| 29 | V | A | -0.6974 | |
| 30 | R | A | -1.4758 | |
| 31 | Y | A | -0.9672 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.9107 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.2638 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4204 | |
| 39 | T | A | -1.1765 | |
| 40 | G | A | -1.2062 | |
| 41 | G | A | -1.3175 | |
| 42 | N | A | -1.5163 | |
| 43 | S | A | -0.8121 | |
| 44 | P | A | -0.2827 | |
| 45 | V | A | 0.5035 | |
| 46 | Q | A | -0.7395 | |
| 47 | E | A | -1.6809 | |
| 48 | F | A | -0.7882 | |
| 49 | T | A | -0.4265 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1810 | |
| 52 | G | A | -1.3574 | |
| 53 | S | A | -1.3626 | |
| 54 | K | A | -2.0306 | |
| 55 | S | A | -1.3834 | |
| 56 | T | A | -0.7744 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2196 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6690 | |
| 61 | G | A | -1.0375 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3440 | |
| 64 | P | A | -1.6426 | |
| 65 | G | A | -1.4014 | |
| 66 | V | A | -1.3491 | |
| 67 | D | A | -1.9601 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.6634 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3887 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.4004 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | 0.0000 | |
| 77 | G | A | 0.4560 | |
| 78 | G | A | 0.9330 | |
| 79 | G | A | 0.9145 | |
| 80 | W | A | 1.9822 | |
| 81 | L | A | 2.7442 | |
| 82 | W | A | 2.6175 | |
| 83 | C | A | 1.8384 | |
| 84 | V | A | 1.2578 | |
| 85 | T | A | 0.2882 | |
| 86 | S | A | 0.0000 | |
| 87 | K | A | -1.5925 | |
| 88 | P | A | -1.0625 | |
| 89 | I | A | -0.6704 | |
| 90 | S | A | -0.5066 | |
| 91 | I | A | -0.5090 | |
| 92 | N | A | -1.6866 | |
| 93 | Y | A | -1.4070 | |
| 94 | R | A | -2.4685 | |
| 95 | T | A | -1.4827 |