| Chain sequence(s) |
A: FSKGHGG
C: FSKGHGG B: FSKGHGG E: FSKGHGG D: FSKGHGG G: FSKGHGG F: FSKGHGG H: FSKGHGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.5279 | |
| 2 | S | A | 0.0000 | |
| 3 | K | A | -2.4290 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -1.8777 | |
| 6 | G | A | 0.0000 | |
| 7 | G | A | -0.0068 | |
| 1 | F | B | 1.6821 | |
| 2 | S | B | -0.4774 | |
| 3 | K | B | -2.4993 | |
| 4 | G | B | -2.8006 | |
| 5 | H | B | -2.2756 | |
| 6 | G | B | -0.8574 | |
| 7 | G | B | -0.3817 | |
| 1 | F | C | 1.4753 | |
| 2 | S | C | 0.0000 | |
| 3 | K | C | -2.7522 | |
| 4 | G | C | -2.5565 | |
| 5 | H | C | -1.6858 | |
| 6 | G | C | -0.1349 | |
| 7 | G | C | 0.4013 | |
| 1 | F | D | 1.9595 | |
| 2 | S | D | 0.0000 | |
| 3 | K | D | -2.2299 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -1.8717 | |
| 6 | G | D | 0.0000 | |
| 7 | G | D | -0.0892 | |
| 1 | F | E | 1.5803 | |
| 2 | S | E | 0.0000 | |
| 3 | K | E | -2.6293 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | -1.7826 | |
| 6 | G | E | -0.3660 | |
| 7 | G | E | 0.1640 | |
| 1 | F | F | 1.5444 | |
| 2 | S | F | -0.3300 | |
| 3 | K | F | -2.3936 | |
| 4 | G | F | -2.4045 | |
| 5 | H | F | -2.1966 | |
| 6 | G | F | -1.0799 | |
| 7 | G | F | -0.8265 | |
| 1 | F | G | 1.0364 | |
| 2 | S | G | 0.0000 | |
| 3 | K | G | -2.3463 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -1.6851 | |
| 6 | G | G | 0.0000 | |
| 7 | G | G | -0.3218 | |
| 1 | F | H | 0.9142 | |
| 2 | S | H | 0.0000 | |
| 3 | K | H | -2.1763 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | -1.4870 | |
| 6 | G | H | 0.0000 | |
| 7 | G | H | 0.2021 |