Project name: 4-5R0

Status: done

Started: 2025-02-21 02:06:30
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Chain sequence(s) A: MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFAFAVTNDGVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-2.6104
Maximal score value
3.1474
Average score
-0.8
Total score value
-83.204

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3437
2 T A -0.7442
3 E A -1.9602
4 Q A -1.6696
5 Q A -1.2152
6 W A -0.3827
7 N A -1.5716
8 F A -0.9553
9 A A -0.5867
10 G A -0.7832
11 I A -0.5455
12 E A -1.7825
13 A A -0.8909
14 A A -0.4052
15 A A -1.0301
16 S A -0.9855
17 A A -0.7637
18 I A -0.7924
19 Q A -1.2932
20 G A -1.2725
21 N A -1.6589
22 V A 0.0000
23 T A -0.9199
24 S A -0.6743
25 I A -0.3423
26 H A -1.1079
27 S A -0.9249
28 L A 0.0535
29 L A -0.9311
30 D A -2.3660
31 E A -2.5822
32 G A -1.7851
33 K A -2.0989
34 Q A -2.6104
35 S A -1.8628
36 L A -0.9887
37 T A -1.4462
38 K A -1.7648
39 L A -0.2717
40 A A -0.4980
41 A A -0.1612
42 A A 0.1552
43 W A 0.0663
44 G A -0.5362
45 G A -0.7932
46 S A -1.0688
47 G A -1.2510
48 S A -1.5265
49 E A -2.2826
50 A A -1.1081
51 Y A 0.0000
52 Q A -2.1607
53 G A -1.7911
54 V A -0.9094
55 Q A -1.7131
56 Q A -2.3409
57 K A -2.3109
58 W A -1.5740
59 D A -1.7628
60 A A -1.4757
61 T A -1.4318
62 A A -1.3008
63 T A -1.5605
64 E A -2.1470
65 L A -1.0381
66 N A -1.4146
67 N A -2.0889
68 A A -1.2233
69 L A -1.0850
70 Q A -1.7255
71 N A -1.4673
72 L A -0.3865
73 A A 0.0000
74 R A -1.9528
75 T A -1.2330
76 I A -0.8123
77 S A -1.7759
78 E A -2.3372
79 A A -1.1296
80 G A 0.0000
81 Q A -1.9284
82 A A -1.0979
83 M A -0.7984
84 A A -1.1676
85 S A -1.0228
86 T A -0.9391
87 E A -1.2646
88 G A -0.9936
89 N A -1.0303
90 V A 0.7068
91 T A 0.7857
92 G A 0.8869
93 M A 2.1945
94 F A 3.1474
95 A A 2.3949
96 F A 2.7246
97 A A 1.7553
98 V A 2.6317
99 T A 1.1517
100 N A -0.7341
101 D A -1.0140
102 G A 0.1281
103 V A 2.2189
104 I A 2.7822
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Laboratory of Theory of Biopolymers 2018