| Chain sequence(s) |
A: MLGKCLTACCCSRLLFLWCIVPFYLAVLVQASNNQSSHIQLIYQLTLCELQGTDWLAQKFDWAVETFVIFPVLTHIVSYGALTTSHFLDTVGLATVSTAGYYHGRYVLSSIYAVCALAALICFVIRLAKNCMSWRYSCTRYTNFLLDTKGRLYRWRSPVIVEKGGKVEVEGHLIDLKRVVLDGSAATPLTRVSAELWGRL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IS111A,IS42A,VS159A,YS24A,VS72A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 2.46042 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:48)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:14)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:47)
[INFO] Main: Simulation completed successfully. (00:03:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3708 | |
| 2 | L | A | 1.7629 | |
| 3 | G | A | 0.3094 | |
| 4 | K | A | -0.5540 | |
| 5 | C | A | 0.9200 | |
| 6 | L | A | 1.6894 | |
| 7 | T | A | 0.3949 | |
| 8 | A | A | 0.5148 | |
| 9 | C | A | 0.6301 | |
| 10 | C | A | 0.4617 | |
| 11 | C | A | 0.3695 | |
| 12 | S | A | -0.2086 | |
| 13 | R | A | -0.7923 | |
| 14 | L | A | 0.6726 | |
| 15 | L | A | 0.0000 | |
| 16 | F | A | 1.1860 | |
| 17 | L | A | 2.2745 | |
| 18 | W | A | 2.4337 | |
| 19 | C | A | 2.0243 | |
| 20 | I | A | 2.5426 | |
| 21 | V | A | 2.8254 | |
| 22 | P | A | 2.0670 | |
| 23 | F | A | 3.1253 | |
| 24 | S | A | 2.4017 | mutated: YS24A |
| 25 | L | A | 2.6154 | |
| 26 | A | A | 2.0696 | |
| 27 | V | A | 2.5421 | |
| 28 | L | A | 2.2243 | |
| 29 | V | A | 0.6721 | |
| 30 | Q | A | -0.3923 | |
| 31 | A | A | -0.0301 | |
| 32 | S | A | -1.0523 | |
| 33 | N | A | -2.2602 | |
| 34 | N | A | -2.6493 | |
| 35 | Q | A | -2.4097 | |
| 36 | S | A | -1.4447 | |
| 37 | S | A | -1.0067 | |
| 38 | H | A | -0.9592 | |
| 39 | I | A | -0.0594 | |
| 40 | Q | A | -0.6844 | |
| 41 | L | A | 0.8924 | |
| 42 | S | A | 0.7046 | mutated: IS42A |
| 43 | Y | A | 0.6991 | |
| 44 | Q | A | 0.2113 | |
| 45 | L | A | 1.4095 | |
| 46 | T | A | 0.5869 | |
| 47 | L | A | 0.4779 | |
| 48 | C | A | 0.2423 | |
| 49 | E | A | -0.6839 | |
| 50 | L | A | -0.2964 | |
| 51 | Q | A | -1.1652 | |
| 52 | G | A | -1.4254 | |
| 53 | T | A | 0.0000 | |
| 54 | D | A | -2.2333 | |
| 55 | W | A | -1.1926 | |
| 56 | L | A | 0.0000 | |
| 57 | A | A | -1.7349 | |
| 58 | Q | A | -2.0111 | |
| 59 | K | A | -1.6569 | |
| 60 | F | A | -1.1329 | |
| 61 | D | A | -1.5347 | |
| 62 | W | A | -0.0532 | |
| 63 | A | A | 0.0000 | |
| 64 | V | A | 1.0731 | |
| 65 | E | A | 0.3236 | |
| 66 | T | A | 1.6140 | |
| 67 | F | A | 2.9599 | |
| 68 | V | A | 3.5924 | |
| 69 | I | A | 3.2742 | |
| 70 | F | A | 2.6289 | |
| 71 | P | A | 2.3166 | |
| 72 | S | A | 2.1386 | mutated: VS72A |
| 73 | L | A | 2.6011 | |
| 74 | T | A | 0.0000 | |
| 75 | H | A | 1.6597 | |
| 76 | I | A | 2.7896 | |
| 77 | V | A | 1.9991 | |
| 78 | S | A | 1.6054 | |
| 79 | Y | A | 1.8909 | |
| 80 | G | A | 0.8016 | |
| 81 | A | A | 0.5270 | |
| 82 | L | A | 1.1330 | |
| 83 | T | A | 1.0158 | |
| 84 | T | A | 0.8322 | |
| 85 | S | A | 0.0000 | |
| 86 | H | A | 0.0000 | |
| 87 | F | A | 2.6183 | |
| 88 | L | A | 2.1083 | |
| 89 | D | A | 1.2948 | |
| 90 | T | A | 2.2812 | |
| 91 | V | A | 2.4680 | |
| 92 | G | A | 1.6287 | |
| 93 | L | A | 1.6071 | |
| 94 | A | A | 1.5421 | |
| 95 | T | A | 0.9305 | |
| 96 | V | A | 1.2415 | |
| 97 | S | A | 0.0000 | |
| 98 | T | A | 1.0480 | |
| 99 | A | A | 0.8071 | |
| 100 | G | A | 1.4830 | |
| 101 | Y | A | 2.2076 | |
| 102 | Y | A | 1.6377 | |
| 103 | H | A | 0.4138 | |
| 104 | G | A | 0.6726 | |
| 105 | R | A | 1.0906 | |
| 106 | Y | A | 2.4970 | |
| 107 | V | A | 2.6072 | |
| 108 | L | A | 1.7144 | |
| 109 | S | A | 0.0000 | |
| 110 | S | A | 1.6492 | |
| 111 | S | A | 1.4079 | mutated: IS111A |
| 112 | Y | A | 2.0317 | |
| 113 | A | A | 2.0127 | |
| 114 | V | A | 2.5729 | |
| 115 | C | A | 1.9809 | |
| 116 | A | A | 0.0000 | |
| 117 | L | A | 3.0028 | |
| 118 | A | A | 2.1320 | |
| 119 | A | A | 0.0000 | |
| 120 | L | A | 3.3730 | |
| 121 | I | A | 3.3566 | |
| 122 | C | A | 2.5424 | |
| 123 | F | A | 0.0000 | |
| 124 | V | A | 3.2558 | |
| 125 | I | A | 2.8196 | |
| 126 | R | A | 1.4110 | |
| 127 | L | A | 1.7480 | |
| 128 | A | A | 1.0642 | |
| 129 | K | A | 0.1956 | |
| 130 | N | A | -0.1412 | |
| 131 | C | A | 0.4157 | |
| 132 | M | A | 0.0174 | |
| 133 | S | A | 0.0000 | |
| 134 | W | A | 0.6731 | |
| 135 | R | A | -0.4936 | |
| 136 | Y | A | 0.6908 | |
| 137 | S | A | 0.6726 | |
| 138 | C | A | 0.6832 | |
| 139 | T | A | -0.2138 | |
| 140 | R | A | -1.4258 | |
| 141 | Y | A | -1.0970 | |
| 142 | T | A | -1.1703 | |
| 143 | N | A | -1.8948 | |
| 144 | F | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | L | A | -1.7731 | |
| 147 | D | A | 0.0000 | |
| 148 | T | A | -2.1931 | |
| 149 | K | A | -2.7077 | |
| 150 | G | A | -2.3367 | |
| 151 | R | A | -2.3552 | |
| 152 | L | A | -1.2014 | |
| 153 | Y | A | -1.3549 | |
| 154 | R | A | -2.2097 | |
| 155 | W | A | -1.7717 | |
| 156 | R | A | -2.4701 | |
| 157 | S | A | -1.2296 | |
| 158 | P | A | -0.6969 | |
| 159 | S | A | -0.1348 | mutated: VS159A |
| 160 | I | A | 0.0423 | |
| 161 | V | A | 0.2698 | |
| 162 | E | A | -2.5590 | |
| 163 | K | A | -2.8041 | |
| 164 | G | A | -2.1959 | |
| 165 | G | A | -2.0215 | |
| 166 | K | A | -2.3389 | |
| 167 | V | A | 0.0000 | |
| 168 | E | A | -2.1166 | |
| 169 | V | A | 0.0000 | |
| 170 | E | A | -2.6298 | |
| 171 | G | A | -1.9470 | |
| 172 | H | A | -1.8982 | |
| 173 | L | A | -1.7261 | |
| 174 | I | A | 0.0000 | |
| 175 | D | A | -2.0303 | |
| 176 | L | A | -2.0533 | |
| 177 | K | A | -2.7577 | |
| 178 | R | A | -2.2154 | |
| 179 | V | A | 0.0000 | |
| 180 | V | A | 0.0000 | |
| 181 | L | A | -1.1393 | |
| 182 | D | A | -1.7568 | |
| 183 | G | A | 0.0000 | |
| 184 | S | A | -0.5375 | |
| 185 | A | A | -0.3871 | |
| 186 | A | A | -0.3827 | |
| 187 | T | A | 0.0161 | |
| 188 | P | A | 0.0900 | |
| 189 | L | A | 0.9905 | |
| 190 | T | A | 0.1368 | |
| 191 | R | A | -0.7515 | |
| 192 | V | A | 0.7700 | |
| 193 | S | A | -0.0075 | |
| 194 | A | A | 0.0398 | |
| 195 | E | A | -0.6571 | |
| 196 | L | A | 1.1193 | |
| 197 | W | A | 1.0373 | |
| 198 | G | A | -0.2012 | |
| 199 | R | A | -1.0671 | |
| 200 | L | A | 0.6674 |