Chain sequence(s) |
H: QVQLVQSGSELKKPGASVKVSCKASGYTFTDYSMHWVRQAPGQGLEWMGWINPGTGEPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYFCARGVIIAYWGQGTLVTVSS
L: DIVMTQTPLSLSVTPGQPASISCKSSQSIVHSNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQDSHVPYTFGQGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11) [INFO] Main: Simulation completed successfully. (00:01:12) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4843 | |
2 | V | H | -0.8914 | |
3 | Q | H | -1.2141 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.0562 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5245 | |
8 | G | H | -0.5758 | |
9 | S | H | 0.0346 | |
11 | E | H | 0.0034 | |
12 | L | H | 0.7755 | |
13 | K | H | -0.9753 | |
14 | K | H | -2.1416 | |
15 | P | H | -2.0522 | |
16 | G | H | -1.4698 | |
17 | A | H | -1.2226 | |
18 | S | H | -1.2074 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.3452 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5110 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6226 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7149 | |
27 | G | H | -1.0407 | |
28 | Y | H | -0.5925 | |
29 | T | H | -0.4758 | |
30 | F | H | 0.0000 | |
35 | T | H | -1.0031 | |
36 | D | H | -1.6038 | |
37 | Y | H | 0.0722 | |
38 | S | H | 0.0459 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | -0.3776 | |
44 | Q | H | -0.6020 | |
45 | A | H | -0.9308 | |
46 | P | H | -0.7510 | |
47 | G | H | -1.2096 | |
48 | Q | H | -1.8060 | |
49 | G | H | -1.2237 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7978 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | W | H | -0.0650 | |
56 | I | H | 0.0000 | |
57 | N | H | -1.0198 | |
58 | P | H | 0.0000 | |
59 | G | H | -1.1065 | |
62 | T | H | -0.8630 | |
63 | G | H | -1.0789 | |
64 | E | H | -1.5635 | |
65 | P | H | -0.5516 | |
66 | T | H | 0.0079 | |
67 | Y | H | 0.2751 | |
68 | A | H | 0.0000 | |
69 | Q | H | -1.4037 | |
70 | G | H | -1.0751 | |
71 | F | H | -0.4665 | |
72 | T | H | -0.5559 | |
74 | G | H | -0.6134 | |
75 | R | H | -0.4945 | |
76 | F | H | 0.0000 | |
77 | V | H | 0.8234 | |
78 | F | H | 0.0000 | |
79 | S | H | -0.1282 | |
80 | L | H | -0.2569 | |
81 | D | H | -0.4154 | |
82 | T | H | -0.2520 | |
83 | S | H | 0.1426 | |
84 | V | H | 0.6817 | |
85 | S | H | -0.0029 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.1813 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.6168 | |
91 | I | H | 0.0000 | |
92 | S | H | -0.7987 | |
93 | S | H | -1.0965 | |
94 | L | H | 0.0000 | |
95 | K | H | -2.2818 | |
96 | A | H | -1.7906 | |
97 | E | H | -2.1893 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.5565 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.4600 | |
102 | Y | H | 0.0000 | |
103 | F | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | G | H | 0.0000 | |
108 | V | H | 2.0381 | |
114 | I | H | 1.5350 | |
115 | I | H | 0.0000 | |
116 | A | H | 0.5971 | |
117 | Y | H | 0.1551 | |
118 | W | H | -0.2244 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2241 | |
121 | G | H | -0.5005 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.8035 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.1211 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.8770 | |
128 | S | H | -0.8820 | |
1 | D | L | -1.3910 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7164 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.3223 | |
6 | Q | L | 0.0000 | |
7 | T | L | -0.0056 | |
8 | P | L | 0.4539 | |
9 | L | L | 1.1172 | |
10 | S | L | 0.0928 | |
11 | L | L | 0.0220 | |
12 | S | L | -0.7848 | |
13 | V | L | 0.0000 | |
14 | T | L | -1.5860 | |
15 | P | L | -1.6543 | |
16 | G | L | -1.7635 | |
17 | Q | L | -2.1752 | |
18 | P | L | -1.8802 | |
19 | A | L | 0.0000 | |
20 | S | L | -0.6670 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.8919 | |
23 | C | L | 0.0000 | |
24 | K | L | -1.9350 | |
25 | S | L | 0.0000 | |
26 | S | L | -0.9317 | |
27 | Q | L | -1.5576 | |
28 | S | L | -0.9469 | |
29 | I | L | 0.0000 | |
30 | V | L | 0.2943 | |
31 | H | L | -0.5749 | |
32 | S | L | -0.9430 | |
34 | N | L | -1.5951 | |
35 | G | L | -1.0891 | |
36 | N | L | -0.9206 | |
37 | T | L | -0.3231 | |
38 | Y | L | 0.3097 | |
39 | L | L | 0.0000 | |
40 | E | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | L | L | 0.0000 | |
44 | Q | L | -0.9844 | |
45 | K | L | -1.4606 | |
46 | P | L | -0.9905 | |
47 | G | L | -1.4343 | |
48 | Q | L | -2.0097 | |
49 | S | L | -1.2997 | |
50 | P | L | 0.0000 | |
51 | Q | L | -1.0049 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.1506 | |
56 | K | L | -0.5672 | |
57 | V | L | -0.4985 | |
65 | S | L | -0.7672 | |
66 | N | L | -1.1711 | |
67 | R | L | -1.6553 | |
68 | F | L | -0.5685 | |
69 | S | L | -0.5673 | |
70 | G | L | -0.8139 | |
71 | V | L | -0.9610 | |
72 | P | L | -1.2322 | |
74 | D | L | -2.3782 | |
75 | R | L | -2.0513 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.2383 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.7234 | |
80 | G | L | -0.9922 | |
83 | S | L | -0.7840 | |
84 | G | L | -0.8763 | |
85 | T | L | -1.5049 | |
86 | D | L | -2.1198 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.9018 | |
89 | L | L | 0.0000 | |
90 | K | L | -1.4085 | |
91 | I | L | 0.0000 | |
92 | S | L | -2.1304 | |
93 | R | L | -3.0290 | |
94 | V | L | 0.0000 | |
95 | E | L | -2.1171 | |
96 | A | L | -1.3041 | |
97 | E | L | -1.8129 | |
98 | D | L | 0.0000 | |
99 | V | L | -0.5612 | |
100 | G | L | 0.0000 | |
101 | V | L | -0.2673 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | F | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | D | L | 0.0000 | |
108 | S | L | 0.0000 | |
109 | H | L | -0.0519 | |
114 | V | L | 1.0468 | |
115 | P | L | 0.1986 | |
116 | Y | L | 0.4279 | |
117 | T | L | 0.1167 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | Q | L | -0.6334 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.6664 | |
124 | L | L | 0.0000 | |
125 | E | L | -1.3665 | |
126 | I | L | -1.0452 | |
127 | K | L | -1.9293 |