| Chain sequence(s) |
A: EACNLPVRGPCIAFFPRWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGVP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0815 | |
| 2 | A | A | 0.0000 | |
| 3 | C | A | -1.2462 | |
| 4 | N | A | -1.3103 | |
| 5 | L | A | -0.8669 | |
| 6 | P | A | -0.7851 | |
| 7 | V | A | -1.0659 | |
| 8 | R | A | -1.8462 | |
| 9 | G | A | 0.0000 | |
| 10 | P | A | -0.3771 | |
| 11 | C | A | 0.7457 | |
| 12 | I | A | 2.4653 | |
| 13 | A | A | 2.2953 | |
| 14 | F | A | 3.0661 | |
| 15 | F | A | 2.8560 | |
| 16 | P | A | 1.4678 | |
| 17 | R | A | 0.0000 | |
| 18 | W | A | 0.1838 | |
| 19 | A | A | 0.0000 | |
| 20 | F | A | -0.6772 | |
| 21 | D | A | -0.6851 | |
| 22 | A | A | -0.4905 | |
| 23 | V | A | 0.3138 | |
| 24 | K | A | -1.6150 | |
| 25 | G | A | -1.6920 | |
| 26 | K | A | -2.3912 | |
| 27 | C | A | 0.0000 | |
| 28 | V | A | -0.0237 | |
| 29 | L | A | 1.1815 | |
| 30 | F | A | 0.0000 | |
| 31 | P | A | 1.1520 | |
| 32 | Y | A | 0.9488 | |
| 33 | G | A | 0.0000 | |
| 34 | G | A | 0.4696 | |
| 35 | C | A | -0.3280 | |
| 36 | Q | A | -1.6946 | |
| 37 | G | A | -1.6203 | |
| 38 | N | A | -1.2822 | |
| 39 | G | A | -1.0633 | |
| 40 | N | A | 0.0000 | |
| 41 | K | A | -0.4861 | |
| 42 | F | A | 0.0000 | |
| 43 | Y | A | 0.9047 | |
| 44 | S | A | -0.9044 | |
| 45 | E | A | -2.0093 | |
| 46 | K | A | -3.2616 | |
| 47 | E | A | -2.7340 | |
| 48 | C | A | 0.0000 | |
| 49 | R | A | -3.3945 | |
| 50 | E | A | -2.6704 | |
| 51 | Y | A | -0.4785 | |
| 52 | C | A | -1.1189 | |
| 53 | G | A | -1.0780 | |
| 54 | V | A | 0.9822 | |
| 55 | P | A | 0.0471 |