Project name: query_structure

Status: done

Started: 2026-03-16 22:57:26
Settings
Chain sequence(s) A: CAQKGEYCSVYLQCCDPYHCTQPVIGGICA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-2.1808
Maximal score value
2.8444
Average score
-0.0684
Total score value
-2.0521

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.0674
2 A A -0.8723
3 Q A -2.1482
4 K A -2.1514
5 G A -1.5985
6 E A -1.6421
7 Y A -0.1047
8 C A 0.0000
9 S A 0.0000
10 V A 2.8444
11 Y A 2.3572
12 L A 1.4732
13 Q A -0.0136
14 C A -0.5214
15 C A -1.0371
16 D A -2.1808
17 P A -1.6378
18 Y A -1.6394
19 H A -1.6884
20 C A -0.5026
21 T A 0.1246
22 Q A 0.4732
23 P A 1.7205
24 V A 2.8415
25 I A 2.5708
26 G A 1.5277
27 G A 0.6634
28 I A 0.0638
29 C A 0.0000
30 A A -1.0415
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Laboratory of Theory of Biopolymers 2018