| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASQSVNAMGWFRQAPGKGRELVAYIVGSYTYNRGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAASTNAVVALLGRFNEEAFDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.2222 | |
| 2 | V | C | 0.0000 | |
| 3 | Q | C | -1.4949 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 1.0705 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.4726 | |
| 8 | G | C | -1.0517 | |
| 9 | G | C | -0.7973 | |
| 10 | G | C | 0.0517 | |
| 11 | L | C | 0.8858 | |
| 12 | V | C | 0.0000 | |
| 13 | Q | C | -1.4057 | |
| 14 | P | C | -1.6110 | |
| 15 | G | C | -1.3770 | |
| 16 | G | C | -0.9720 | |
| 17 | S | C | -1.4265 | |
| 18 | L | C | -1.1921 | |
| 19 | R | C | -2.2950 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4508 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.3386 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.3292 | |
| 26 | Q | C | -1.6732 | |
| 27 | S | C | -1.4885 | |
| 28 | V | C | 0.0000 | |
| 29 | N | C | -1.6161 | |
| 30 | A | C | 0.0000 | |
| 31 | M | C | 0.0000 | |
| 32 | G | C | 0.0000 | |
| 33 | W | C | 0.0000 | |
| 34 | F | C | 0.0000 | |
| 35 | R | C | -1.1948 | |
| 36 | Q | C | -1.8000 | |
| 37 | A | C | -1.7329 | |
| 38 | P | C | -1.2162 | |
| 39 | G | C | -1.7102 | |
| 40 | K | C | -2.7646 | |
| 41 | G | C | -2.4075 | |
| 42 | R | C | -2.5873 | |
| 43 | E | C | -2.1051 | |
| 44 | L | C | -1.1411 | |
| 45 | V | C | 0.0000 | |
| 46 | A | C | 0.0000 | |
| 47 | Y | C | 0.0000 | |
| 48 | I | C | 0.0000 | |
| 49 | V | C | 0.0000 | |
| 50 | G | C | -0.6791 | |
| 51 | S | C | -0.0587 | |
| 52 | Y | C | 0.7720 | |
| 53 | T | C | 0.2237 | |
| 54 | Y | C | -0.4822 | |
| 55 | N | C | -1.5334 | |
| 56 | R | C | -2.2628 | |
| 57 | G | C | -1.8224 | |
| 58 | R | C | -1.8084 | |
| 59 | F | C | 0.0000 | |
| 60 | T | C | -1.3344 | |
| 61 | I | C | 0.0000 | |
| 62 | S | C | -0.7121 | |
| 63 | R | C | -1.4587 | |
| 64 | D | C | -2.0046 | |
| 65 | N | C | -2.7186 | |
| 66 | A | C | -1.8854 | |
| 67 | K | C | -2.8275 | |
| 68 | R | C | -2.6833 | |
| 69 | M | C | -1.3567 | |
| 70 | V | C | 0.0000 | |
| 71 | Y | C | -0.7246 | |
| 72 | L | C | 0.0000 | |
| 73 | Q | C | -1.7053 | |
| 74 | M | C | 0.0000 | |
| 75 | N | C | -1.6385 | |
| 76 | S | C | -1.2559 | |
| 77 | L | C | 0.0000 | |
| 78 | R | C | -2.2643 | |
| 79 | A | C | -1.7114 | |
| 80 | E | C | -2.2177 | |
| 81 | D | C | 0.0000 | |
| 82 | T | C | -0.8438 | |
| 83 | A | C | 0.0000 | |
| 84 | V | C | -0.3580 | |
| 85 | Y | C | 0.0000 | |
| 86 | Y | C | -0.1874 | |
| 87 | C | C | 0.0000 | |
| 88 | A | C | 0.0000 | |
| 89 | A | C | 0.0000 | |
| 90 | S | C | 0.0000 | |
| 91 | T | C | -1.0422 | |
| 92 | N | C | -0.6649 | |
| 93 | A | C | 0.5321 | |
| 94 | V | C | 2.1750 | |
| 95 | V | C | 1.7596 | |
| 96 | A | C | 0.0000 | |
| 97 | L | C | 2.1745 | |
| 98 | L | C | 1.9141 | |
| 99 | G | C | 0.0000 | |
| 100 | R | C | -0.3662 | |
| 101 | F | C | 1.0521 | |
| 102 | N | C | -0.5168 | |
| 103 | E | C | -1.9824 | |
| 104 | E | C | -2.2051 | |
| 105 | A | C | 0.0000 | |
| 106 | F | C | 0.0000 | |
| 107 | D | C | -2.2868 | |
| 108 | Y | C | -1.2095 | |
| 109 | W | C | -0.1670 | |
| 110 | G | C | -0.1354 | |
| 111 | Q | C | -0.8091 | |
| 112 | G | C | 0.0000 | |
| 113 | T | C | -0.6370 | |
| 114 | Q | C | -0.9211 | |
| 115 | V | C | 0.0000 | |
| 116 | T | C | -0.3110 | |
| 117 | V | C | 0.0000 | |
| 118 | S | C | -0.8001 | |
| 119 | S | C | -0.5299 |