| Chain sequence(s) |
A: CIKALRAKIQALAQAIEALHAEIEALEAEIEALHAEIEALEAEIEANEAEIEALHAEIEALEAEIEALHAEIEALEAEIEALHAEIQALAQAIKALRAKGP
C: CIKALRAKIQALAQAIEALHAEIEALEAEIEALHAEIEALEAEIEANEAEIEALHAEIEALEAEIEALHAEIEALEAEIEALHAEIQALAQAIKALRAKGP B: CIKALRAKIQALAQAIEALHAEIEALEAEIEALHAEIEALEAEIEANEAEIEALHAEIEALEAEIEALHAEIEALEAEIEALHAEIQALAQAIKALRAKGP input PDB |
| Selected Chain(s) | A,C,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:26)
[INFO] Main: Simulation completed successfully. (00:09:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.4324 | |
| 2 | I | A | 0.2134 | |
| 3 | K | A | -1.8010 | |
| 4 | A | A | -1.4719 | |
| 5 | L | A | 0.0000 | |
| 6 | R | A | -2.9321 | |
| 7 | A | A | -2.1292 | |
| 8 | K | A | -2.8226 | |
| 9 | I | A | 0.0000 | |
| 10 | Q | A | -2.5370 | |
| 11 | A | A | -1.8179 | |
| 12 | L | A | 0.0000 | |
| 13 | A | A | -1.8031 | |
| 14 | Q | A | -2.2827 | |
| 15 | A | A | -1.6448 | |
| 16 | I | A | 0.0000 | |
| 17 | E | A | -2.4512 | |
| 18 | A | A | -1.6744 | |
| 19 | L | A | 0.0000 | |
| 20 | H | A | -2.0316 | |
| 21 | A | A | -1.7547 | |
| 22 | E | A | -2.1961 | |
| 23 | I | A | 0.0000 | |
| 24 | E | A | -3.1054 | |
| 25 | A | A | -2.4854 | |
| 26 | L | A | 0.0000 | |
| 27 | E | A | -3.8224 | |
| 28 | A | A | -2.9753 | |
| 29 | E | A | -3.7603 | |
| 30 | I | A | 0.0000 | |
| 31 | E | A | -3.4875 | |
| 32 | A | A | -2.5685 | |
| 33 | L | A | 0.0000 | |
| 34 | H | A | -2.9570 | |
| 35 | A | A | -2.4240 | |
| 36 | E | A | -2.9528 | |
| 37 | I | A | 0.0000 | |
| 38 | E | A | -3.3165 | |
| 39 | A | A | -2.5861 | |
| 40 | L | A | 0.0000 | |
| 41 | E | A | -3.7002 | |
| 42 | A | A | -2.7398 | |
| 43 | E | A | -3.2063 | |
| 44 | I | A | 0.0000 | |
| 45 | E | A | -3.5712 | |
| 46 | A | A | -2.6226 | |
| 47 | N | A | 0.0000 | |
| 48 | E | A | -3.7238 | |
| 49 | A | A | -2.6434 | |
| 50 | E | A | -2.9885 | |
| 51 | I | A | 0.0000 | |
| 52 | E | A | -3.2230 | |
| 53 | A | A | -2.3170 | |
| 54 | L | A | 0.0000 | |
| 55 | H | A | -2.7848 | |
| 56 | A | A | -2.3591 | |
| 57 | E | A | -3.0455 | |
| 58 | I | A | 0.0000 | |
| 59 | E | A | -3.2884 | |
| 60 | A | A | -2.6874 | |
| 61 | L | A | 0.0000 | |
| 62 | E | A | -3.5369 | |
| 63 | A | A | -2.6833 | |
| 64 | E | A | -3.5918 | |
| 65 | I | A | 0.0000 | |
| 66 | E | A | -3.4261 | |
| 67 | A | A | -2.5939 | |
| 68 | L | A | 0.0000 | |
| 69 | H | A | -3.0631 | |
| 70 | A | A | -2.3795 | |
| 71 | E | A | -3.2833 | |
| 72 | I | A | 0.0000 | |
| 73 | E | A | -3.2768 | |
| 74 | A | A | -2.6221 | |
| 75 | L | A | 0.0000 | |
| 76 | E | A | -3.3276 | |
| 77 | A | A | -2.4120 | |
| 78 | E | A | -3.1954 | |
| 79 | I | A | 0.0000 | |
| 80 | E | A | -3.2589 | |
| 81 | A | A | -2.3401 | |
| 82 | L | A | 0.0000 | |
| 83 | H | A | -2.8707 | |
| 84 | A | A | -1.9267 | |
| 85 | E | A | -2.6517 | |
| 86 | I | A | 0.0000 | |
| 87 | Q | A | -2.3397 | |
| 88 | A | A | -1.7151 | |
| 89 | L | A | 0.0000 | |
| 90 | A | A | -1.7747 | |
| 91 | Q | A | -2.3783 | |
| 92 | A | A | -1.8844 | |
| 93 | I | A | 0.0000 | |
| 94 | K | A | -2.8619 | |
| 95 | A | A | -2.2075 | |
| 96 | L | A | -2.2422 | |
| 97 | R | A | -3.0018 | |
| 98 | A | A | -2.1393 | |
| 99 | K | A | -2.6623 | |
| 100 | G | A | -1.8120 | |
| 101 | P | A | -1.5246 | |
| 1 | C | B | 0.4280 | |
| 2 | I | B | 0.2023 | |
| 3 | K | B | -1.7767 | |
| 4 | A | B | -1.4081 | |
| 5 | L | B | 0.0000 | |
| 6 | R | B | -2.8136 | |
| 7 | A | B | -2.0012 | |
| 8 | K | B | -2.5254 | |
| 9 | I | B | 0.0000 | |
| 10 | Q | B | -2.3996 | |
| 11 | A | B | -1.6994 | |
| 12 | L | B | 0.0000 | |
| 13 | A | B | -1.7212 | |
| 14 | Q | B | -2.2427 | |
| 15 | A | B | -1.6267 | |
| 16 | I | B | 0.0000 | |
| 17 | E | B | -2.4252 | |
| 18 | A | B | -1.6140 | |
| 19 | L | B | 0.0000 | |
| 20 | H | B | -1.8252 | |
| 21 | A | B | -1.5504 | |
| 22 | E | B | -2.1220 | |
| 23 | I | B | 0.0000 | |
| 24 | E | B | -2.4037 | |
| 25 | A | B | -1.9754 | |
| 26 | L | B | 0.0000 | |
| 27 | E | B | -2.8826 | |
| 28 | A | B | -2.1714 | |
| 29 | E | B | -2.6955 | |
| 30 | I | B | 0.0000 | |
| 31 | E | B | -3.0096 | |
| 32 | A | B | -2.0780 | |
| 33 | L | B | 0.0000 | |
| 34 | H | B | -2.5773 | |
| 35 | A | B | -2.1701 | |
| 36 | E | B | -2.8215 | |
| 37 | I | B | 0.0000 | |
| 38 | E | B | -3.1733 | |
| 39 | A | B | -2.5164 | |
| 40 | L | B | 0.0000 | |
| 41 | E | B | -3.4887 | |
| 42 | A | B | -2.6077 | |
| 43 | E | B | -3.1197 | |
| 44 | I | B | 0.0000 | |
| 45 | E | B | -3.2638 | |
| 46 | A | B | -2.4685 | |
| 47 | N | B | 0.0000 | |
| 48 | E | B | -3.1258 | |
| 49 | A | B | -2.4282 | |
| 50 | E | B | -3.0468 | |
| 51 | I | B | 0.0000 | |
| 52 | E | B | -2.9409 | |
| 53 | A | B | -2.0814 | |
| 54 | L | B | 0.0000 | |
| 55 | H | B | -2.3147 | |
| 56 | A | B | -1.9780 | |
| 57 | E | B | -2.4400 | |
| 58 | I | B | 0.0000 | |
| 59 | E | B | -3.0675 | |
| 60 | A | B | -2.3619 | |
| 61 | L | B | 0.0000 | |
| 62 | E | B | -3.6378 | |
| 63 | A | B | -2.4786 | |
| 64 | E | B | -2.9448 | |
| 65 | I | B | 0.0000 | |
| 66 | E | B | -3.2430 | |
| 67 | A | B | -2.3089 | |
| 68 | L | B | 0.0000 | |
| 69 | H | B | -2.8734 | |
| 70 | A | B | -2.4218 | |
| 71 | E | B | -3.1887 | |
| 72 | I | B | 0.0000 | |
| 73 | E | B | -3.4914 | |
| 74 | A | B | -2.8482 | |
| 75 | L | B | 0.0000 | |
| 76 | E | B | -3.9532 | |
| 77 | A | B | -2.8779 | |
| 78 | E | B | -3.8104 | |
| 79 | I | B | 0.0000 | |
| 80 | E | B | -3.4657 | |
| 81 | A | B | -2.5217 | |
| 82 | L | B | 0.0000 | |
| 83 | H | B | -2.8271 | |
| 84 | A | B | -1.8333 | |
| 85 | E | B | -2.4640 | |
| 86 | I | B | 0.0000 | |
| 87 | Q | B | -2.2724 | |
| 88 | A | B | -1.6436 | |
| 89 | L | B | 0.0000 | |
| 90 | A | B | -1.7740 | |
| 91 | Q | B | -2.3621 | |
| 92 | A | B | -1.8782 | |
| 93 | I | B | 0.0000 | |
| 94 | K | B | -2.8596 | |
| 95 | A | B | -2.1992 | |
| 96 | L | B | -2.2429 | |
| 97 | R | B | -2.9759 | |
| 98 | A | B | -2.1218 | |
| 99 | K | B | -2.6442 | |
| 100 | G | B | -1.9673 | |
| 101 | P | B | -1.4745 | |
| 1 | C | C | 0.4412 | |
| 2 | I | C | 0.2134 | |
| 3 | K | C | -1.8563 | |
| 4 | A | C | -1.5463 | |
| 5 | L | C | 0.0000 | |
| 6 | R | C | -2.9680 | |
| 7 | A | C | -2.2909 | |
| 8 | K | C | -3.1285 | |
| 9 | I | C | 0.0000 | |
| 10 | Q | C | -2.5678 | |
| 11 | A | C | -1.9242 | |
| 12 | L | C | 0.0000 | |
| 13 | A | C | -1.7700 | |
| 14 | Q | C | -2.3052 | |
| 15 | A | C | -1.6355 | |
| 16 | I | C | 0.0000 | |
| 17 | E | C | -2.4623 | |
| 18 | A | C | -1.7379 | |
| 19 | L | C | 0.0000 | |
| 20 | H | C | -1.9608 | |
| 21 | A | C | -1.8706 | |
| 22 | E | C | -2.6111 | |
| 23 | I | C | 0.0000 | |
| 24 | E | C | -3.0938 | |
| 25 | A | C | -2.5259 | |
| 26 | L | C | 0.0000 | |
| 27 | E | C | -3.6559 | |
| 28 | A | C | -2.7472 | |
| 29 | E | C | -3.3227 | |
| 30 | I | C | 0.0000 | |
| 31 | E | C | -3.1595 | |
| 32 | A | C | -2.2247 | |
| 33 | L | C | 0.0000 | |
| 34 | H | C | -2.4133 | |
| 35 | A | C | -2.2122 | |
| 36 | E | C | -2.9576 | |
| 37 | I | C | 0.0000 | |
| 38 | E | C | -3.2843 | |
| 39 | A | C | -2.6872 | |
| 40 | L | C | 0.0000 | |
| 41 | E | C | -3.8208 | |
| 42 | A | C | -2.9137 | |
| 43 | E | C | -3.6983 | |
| 44 | I | C | 0.0000 | |
| 45 | E | C | -3.4183 | |
| 46 | A | C | -2.6757 | |
| 47 | N | C | -2.9853 | |
| 48 | E | C | -3.1277 | |
| 49 | A | C | -2.3041 | |
| 50 | E | C | -2.8629 | |
| 51 | I | C | 0.0000 | |
| 52 | E | C | -2.8859 | |
| 53 | A | C | -2.0587 | |
| 54 | L | C | 0.0000 | |
| 55 | H | C | -2.2592 | |
| 56 | A | C | -2.0550 | |
| 57 | E | C | -2.6793 | |
| 58 | I | C | 0.0000 | |
| 59 | E | C | -3.1713 | |
| 60 | A | C | -2.5799 | |
| 61 | L | C | 0.0000 | |
| 62 | E | C | -3.7450 | |
| 63 | A | C | -2.7720 | |
| 64 | E | C | -3.5195 | |
| 65 | I | C | 0.0000 | |
| 66 | E | C | -3.2178 | |
| 67 | A | C | -2.3827 | |
| 68 | L | C | 0.0000 | |
| 69 | H | C | -2.4736 | |
| 70 | A | C | -2.0213 | |
| 71 | E | C | -2.7667 | |
| 72 | I | C | 0.0000 | |
| 73 | E | C | -3.3069 | |
| 74 | A | C | -2.6462 | |
| 75 | L | C | 0.0000 | |
| 76 | E | C | -3.9598 | |
| 77 | A | C | -2.8794 | |
| 78 | E | C | -3.7311 | |
| 79 | I | C | 0.0000 | |
| 80 | E | C | -3.5433 | |
| 81 | A | C | -2.5764 | |
| 82 | L | C | 0.0000 | |
| 83 | H | C | -2.9265 | |
| 84 | A | C | -1.9440 | |
| 85 | E | C | -2.6779 | |
| 86 | I | C | 0.0000 | |
| 87 | Q | C | -2.3216 | |
| 88 | A | C | -1.7137 | |
| 89 | L | C | 0.0000 | |
| 90 | A | C | -1.7505 | |
| 91 | Q | C | -2.3801 | |
| 92 | A | C | -1.8871 | |
| 93 | I | C | 0.0000 | |
| 94 | K | C | -2.8513 | |
| 95 | A | C | -2.0222 | |
| 96 | L | C | -2.2759 | |
| 97 | R | C | -2.9837 | |
| 98 | A | C | -2.1237 | |
| 99 | K | C | -2.6088 | |
| 100 | G | C | -1.9181 | |
| 101 | P | C | -1.4604 |