Project name: test run

Status: done

Started: 2026-03-01 13:01:12
Settings
Chain sequence(s) A: CIKALRAKIQALAQAIEALHAEIEALEAEIEALHAEIEALEAEIEANEAEIEALHAEIEALEAEIEALHAEIEALEAEIEALHAEIQALAQAIKALRAKGP
C: CIKALRAKIQALAQAIEALHAEIEALEAEIEALHAEIEALEAEIEANEAEIEALHAEIEALEAEIEALHAEIEALEAEIEALHAEIQALAQAIKALRAKGP
B: CIKALRAKIQALAQAIEALHAEIEALEAEIEALHAEIEALEAEIEANEAEIEALHAEIEALEAEIEALHAEIEALEAEIEALHAEIQALAQAIKALRAKGP
input PDB
Selected Chain(s) A,C,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:28)
Show buried residues

Minimal score value
-3.9598
Maximal score value
0.4412
Average score
-1.875
Total score value
-568.1139

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.4324
2 I A 0.2134
3 K A -1.8010
4 A A -1.4719
5 L A 0.0000
6 R A -2.9321
7 A A -2.1292
8 K A -2.8226
9 I A 0.0000
10 Q A -2.5370
11 A A -1.8179
12 L A 0.0000
13 A A -1.8031
14 Q A -2.2827
15 A A -1.6448
16 I A 0.0000
17 E A -2.4512
18 A A -1.6744
19 L A 0.0000
20 H A -2.0316
21 A A -1.7547
22 E A -2.1961
23 I A 0.0000
24 E A -3.1054
25 A A -2.4854
26 L A 0.0000
27 E A -3.8224
28 A A -2.9753
29 E A -3.7603
30 I A 0.0000
31 E A -3.4875
32 A A -2.5685
33 L A 0.0000
34 H A -2.9570
35 A A -2.4240
36 E A -2.9528
37 I A 0.0000
38 E A -3.3165
39 A A -2.5861
40 L A 0.0000
41 E A -3.7002
42 A A -2.7398
43 E A -3.2063
44 I A 0.0000
45 E A -3.5712
46 A A -2.6226
47 N A 0.0000
48 E A -3.7238
49 A A -2.6434
50 E A -2.9885
51 I A 0.0000
52 E A -3.2230
53 A A -2.3170
54 L A 0.0000
55 H A -2.7848
56 A A -2.3591
57 E A -3.0455
58 I A 0.0000
59 E A -3.2884
60 A A -2.6874
61 L A 0.0000
62 E A -3.5369
63 A A -2.6833
64 E A -3.5918
65 I A 0.0000
66 E A -3.4261
67 A A -2.5939
68 L A 0.0000
69 H A -3.0631
70 A A -2.3795
71 E A -3.2833
72 I A 0.0000
73 E A -3.2768
74 A A -2.6221
75 L A 0.0000
76 E A -3.3276
77 A A -2.4120
78 E A -3.1954
79 I A 0.0000
80 E A -3.2589
81 A A -2.3401
82 L A 0.0000
83 H A -2.8707
84 A A -1.9267
85 E A -2.6517
86 I A 0.0000
87 Q A -2.3397
88 A A -1.7151
89 L A 0.0000
90 A A -1.7747
91 Q A -2.3783
92 A A -1.8844
93 I A 0.0000
94 K A -2.8619
95 A A -2.2075
96 L A -2.2422
97 R A -3.0018
98 A A -2.1393
99 K A -2.6623
100 G A -1.8120
101 P A -1.5246
1 C B 0.4280
2 I B 0.2023
3 K B -1.7767
4 A B -1.4081
5 L B 0.0000
6 R B -2.8136
7 A B -2.0012
8 K B -2.5254
9 I B 0.0000
10 Q B -2.3996
11 A B -1.6994
12 L B 0.0000
13 A B -1.7212
14 Q B -2.2427
15 A B -1.6267
16 I B 0.0000
17 E B -2.4252
18 A B -1.6140
19 L B 0.0000
20 H B -1.8252
21 A B -1.5504
22 E B -2.1220
23 I B 0.0000
24 E B -2.4037
25 A B -1.9754
26 L B 0.0000
27 E B -2.8826
28 A B -2.1714
29 E B -2.6955
30 I B 0.0000
31 E B -3.0096
32 A B -2.0780
33 L B 0.0000
34 H B -2.5773
35 A B -2.1701
36 E B -2.8215
37 I B 0.0000
38 E B -3.1733
39 A B -2.5164
40 L B 0.0000
41 E B -3.4887
42 A B -2.6077
43 E B -3.1197
44 I B 0.0000
45 E B -3.2638
46 A B -2.4685
47 N B 0.0000
48 E B -3.1258
49 A B -2.4282
50 E B -3.0468
51 I B 0.0000
52 E B -2.9409
53 A B -2.0814
54 L B 0.0000
55 H B -2.3147
56 A B -1.9780
57 E B -2.4400
58 I B 0.0000
59 E B -3.0675
60 A B -2.3619
61 L B 0.0000
62 E B -3.6378
63 A B -2.4786
64 E B -2.9448
65 I B 0.0000
66 E B -3.2430
67 A B -2.3089
68 L B 0.0000
69 H B -2.8734
70 A B -2.4218
71 E B -3.1887
72 I B 0.0000
73 E B -3.4914
74 A B -2.8482
75 L B 0.0000
76 E B -3.9532
77 A B -2.8779
78 E B -3.8104
79 I B 0.0000
80 E B -3.4657
81 A B -2.5217
82 L B 0.0000
83 H B -2.8271
84 A B -1.8333
85 E B -2.4640
86 I B 0.0000
87 Q B -2.2724
88 A B -1.6436
89 L B 0.0000
90 A B -1.7740
91 Q B -2.3621
92 A B -1.8782
93 I B 0.0000
94 K B -2.8596
95 A B -2.1992
96 L B -2.2429
97 R B -2.9759
98 A B -2.1218
99 K B -2.6442
100 G B -1.9673
101 P B -1.4745
1 C C 0.4412
2 I C 0.2134
3 K C -1.8563
4 A C -1.5463
5 L C 0.0000
6 R C -2.9680
7 A C -2.2909
8 K C -3.1285
9 I C 0.0000
10 Q C -2.5678
11 A C -1.9242
12 L C 0.0000
13 A C -1.7700
14 Q C -2.3052
15 A C -1.6355
16 I C 0.0000
17 E C -2.4623
18 A C -1.7379
19 L C 0.0000
20 H C -1.9608
21 A C -1.8706
22 E C -2.6111
23 I C 0.0000
24 E C -3.0938
25 A C -2.5259
26 L C 0.0000
27 E C -3.6559
28 A C -2.7472
29 E C -3.3227
30 I C 0.0000
31 E C -3.1595
32 A C -2.2247
33 L C 0.0000
34 H C -2.4133
35 A C -2.2122
36 E C -2.9576
37 I C 0.0000
38 E C -3.2843
39 A C -2.6872
40 L C 0.0000
41 E C -3.8208
42 A C -2.9137
43 E C -3.6983
44 I C 0.0000
45 E C -3.4183
46 A C -2.6757
47 N C -2.9853
48 E C -3.1277
49 A C -2.3041
50 E C -2.8629
51 I C 0.0000
52 E C -2.8859
53 A C -2.0587
54 L C 0.0000
55 H C -2.2592
56 A C -2.0550
57 E C -2.6793
58 I C 0.0000
59 E C -3.1713
60 A C -2.5799
61 L C 0.0000
62 E C -3.7450
63 A C -2.7720
64 E C -3.5195
65 I C 0.0000
66 E C -3.2178
67 A C -2.3827
68 L C 0.0000
69 H C -2.4736
70 A C -2.0213
71 E C -2.7667
72 I C 0.0000
73 E C -3.3069
74 A C -2.6462
75 L C 0.0000
76 E C -3.9598
77 A C -2.8794
78 E C -3.7311
79 I C 0.0000
80 E C -3.5433
81 A C -2.5764
82 L C 0.0000
83 H C -2.9265
84 A C -1.9440
85 E C -2.6779
86 I C 0.0000
87 Q C -2.3216
88 A C -1.7137
89 L C 0.0000
90 A C -1.7505
91 Q C -2.3801
92 A C -1.8871
93 I C 0.0000
94 K C -2.8513
95 A C -2.0222
96 L C -2.2759
97 R C -2.9837
98 A C -2.1237
99 K C -2.6088
100 G C -1.9181
101 P C -1.4604
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Laboratory of Theory of Biopolymers 2018