Project name: query_structure

Status: done

Started: 2026-03-17 00:06:15
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Chain sequence(s) A: MAVSDVPRKLEVVAATPTSLLISWDGIGGWYGYYYRITYGETGGNSPVQEFTVPYSYSTATISGLKPGVDYTITVYAVTYYNYAYTVYSSISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:12)
Show buried residues

Minimal score value
-3.3565
Maximal score value
2.1281
Average score
-0.1489
Total score value
-14.447

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.4313
2 A A 1.1004
3 V A 1.5029
4 S A 0.4472
5 D A 0.1884
6 V A -0.2114
7 P A 0.0000
8 R A -3.1307
9 K A -3.3565
10 L A 0.0000
11 E A -2.0333
12 V A 0.1348
13 V A 1.5698
14 A A 0.9214
15 A A 0.3394
16 T A -0.3256
17 P A -1.1101
18 T A -0.9970
19 S A -0.5058
20 L A 0.0000
21 L A 0.8079
22 I A 0.0000
23 S A -0.8315
24 W A 0.0000
25 D A -3.0647
26 G A -1.3513
27 I A -0.3810
28 G A -0.3017
29 G A 0.3789
30 W A 1.4214
31 Y A 1.3610
32 G A 1.4564
33 Y A 2.0679
34 Y A 1.7762
35 Y A 0.0000
36 R A 0.0256
37 I A 0.0000
38 T A -0.6009
39 Y A -0.4133
40 G A 0.0000
41 E A -1.7326
42 T A -1.3581
43 G A -1.3563
44 G A -1.2593
45 N A -1.6738
46 S A -0.8492
47 P A -0.3306
48 V A 0.3067
49 Q A -1.2011
50 E A -1.8083
51 F A -0.6681
52 T A 0.2995
53 V A 0.9760
54 P A 1.2408
55 Y A 2.1281
56 S A 1.1278
57 Y A 1.2864
58 S A 0.1525
59 T A 0.1113
60 A A 0.0000
61 T A 0.0875
62 I A 0.0000
63 S A -0.6492
64 G A -1.0261
65 L A 0.0000
66 K A -2.3863
67 P A -1.6688
68 G A -1.4889
69 V A -1.5025
70 D A -2.0660
71 Y A 0.0000
72 T A -0.7888
73 I A 0.0000
74 T A -0.3133
75 V A 0.0000
76 Y A 0.5709
77 A A 0.0000
78 V A 0.0000
79 T A 0.0000
80 Y A 1.6575
81 Y A 0.9465
82 N A -0.0055
83 Y A 1.3104
84 A A 1.1524
85 Y A 1.8315
86 T A 1.4967
87 V A 1.4231
88 Y A 1.5051
89 S A 0.5942
90 S A 0.2373
91 I A -0.3378
92 S A -0.6864
93 I A -0.7414
94 N A -1.7345
95 Y A -1.4995
96 R A -2.5509
97 T A -1.5220
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Laboratory of Theory of Biopolymers 2018