| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPQHPGEDDRVDFSFDPKQTQLFIVGCEPPTGEHWDLADPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPVGHPLPDDPPPSPLYVPPPPESPYWVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8056 | |
| 2 | L | A | 1.6294 | |
| 3 | P | A | 0.4065 | |
| 4 | P | A | 0.1264 | |
| 5 | T | A | -0.0836 | |
| 6 | T | A | -0.0630 | |
| 7 | P | A | 0.2701 | |
| 8 | V | A | 1.1871 | |
| 9 | A | A | -0.0330 | |
| 10 | K | A | -1.1263 | |
| 11 | V | A | -0.4123 | |
| 12 | Q | A | -1.5424 | |
| 13 | S | A | -1.6087 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4317 | |
| 16 | E | A | -2.4473 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4598 | |
| 20 | P | A | 0.1293 | |
| 21 | T | A | 0.1645 | |
| 22 | S | A | -0.0960 | |
| 23 | L | A | 0.0989 | |
| 24 | F | A | -0.0246 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2671 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8715 | |
| 31 | R | A | -2.6477 | |
| 32 | L | A | -0.7743 | |
| 33 | L | A | 1.2090 | |
| 34 | T | A | 1.4431 | |
| 35 | V | A | 1.9577 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2607 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6383 | |
| 40 | K | A | -1.8633 | |
| 41 | D | A | -0.7198 | |
| 42 | I | A | 1.2507 | |
| 43 | V | A | 2.2236 | |
| 44 | V | A | 1.6587 | |
| 45 | N | A | -0.5213 | |
| 46 | G | A | -0.3600 | |
| 47 | K | A | -0.1194 | |
| 48 | V | A | 2.2135 | |
| 49 | L | A | 2.5430 | |
| 50 | V | A | 1.4807 | |
| 51 | P | A | 0.3693 | |
| 52 | K | A | -0.6754 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1352 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4827 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3032 | |
| 70 | K | A | -1.8160 | |
| 71 | F | A | -0.6705 | |
| 72 | A | A | -0.5745 | |
| 73 | L | A | -0.8421 | |
| 74 | P | A | -1.2403 | |
| 75 | Q | A | -2.4746 | |
| 76 | K | A | -3.0967 | |
| 77 | D | A | -2.9918 | |
| 78 | F | A | -1.6479 | |
| 79 | Y | A | -1.9319 | |
| 80 | D | A | -2.7756 | |
| 81 | P | A | -2.3633 | |
| 82 | E | A | -3.0823 | |
| 83 | K | A | -3.4474 | |
| 84 | E | A | -2.5061 | |
| 85 | R | A | -1.3218 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6379 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9656 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3189 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6630 | |
| 99 | G | A | -0.5116 | |
| 100 | P | A | -0.3730 | |
| 101 | L | A | 0.1033 | |
| 102 | G | A | -0.2372 | |
| 103 | K | A | -0.7599 | |
| 104 | G | A | -0.6052 | |
| 105 | S | A | -0.5911 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.2339 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.4301 | |
| 110 | L | A | -0.2572 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3541 | |
| 113 | K | A | -0.6705 | |
| 114 | L | A | -1.0735 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4931 | |
| 117 | T | A | -1.3472 | |
| 118 | E | A | -2.4381 | |
| 119 | N | A | -2.5802 | |
| 120 | P | A | -2.1868 | |
| 121 | T | A | -1.7369 | |
| 122 | E | A | -2.4101 | |
| 123 | P | A | -1.2077 | |
| 124 | Q | A | -1.0678 | |
| 125 | H | A | -1.1187 | |
| 126 | P | A | -1.8368 | |
| 127 | G | A | -2.4588 | |
| 128 | E | A | -3.1607 | |
| 129 | D | A | -3.1391 | |
| 130 | D | A | -2.2256 | |
| 131 | R | A | -1.7552 | |
| 132 | V | A | -0.6797 | |
| 133 | D | A | -1.4117 | |
| 134 | F | A | -0.6349 | |
| 135 | S | A | -0.5118 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7906 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5579 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2481 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1249 | |
| 157 | D | A | 0.2993 | |
| 158 | L | A | 0.7705 | |
| 159 | A | A | 0.1577 | |
| 160 | D | A | -1.4500 | |
| 161 | P | A | -0.2723 | |
| 162 | C | A | 0.1551 | |
| 163 | P | A | -0.1861 | |
| 164 | G | A | -0.0906 | |
| 165 | L | A | 0.5550 | |
| 166 | P | A | -0.1219 | |
| 167 | P | A | -0.3455 | |
| 168 | G | A | -0.4186 | |
| 169 | A | A | -0.0219 | |
| 170 | C | A | 0.6569 | |
| 171 | P | A | 0.5041 | |
| 172 | P | A | 0.7568 | |
| 173 | I | A | 1.9499 | |
| 174 | Q | A | 0.8369 | |
| 175 | L | A | 1.4710 | |
| 176 | V | A | 0.8354 | |
| 177 | N | A | -0.3421 | |
| 178 | S | A | 0.0091 | |
| 179 | V | A | 0.3949 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3699 | |
| 182 | D | A | 0.0826 | |
| 183 | G | A | -0.1557 | |
| 184 | D | A | -0.5602 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1432 | |
| 190 | F | A | 0.0562 | |
| 191 | G | A | -0.1083 | |
| 192 | N | A | -0.2823 | |
| 193 | M | A | -0.1590 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4366 | |
| 197 | E | A | -2.6489 | |
| 198 | L | A | -1.2556 | |
| 199 | Q | A | -2.5626 | |
| 200 | Q | A | -3.3558 | |
| 201 | D | A | -3.6132 | |
| 202 | R | A | -3.3475 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1744 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4003 | |
| 211 | S | A | -1.9258 | |
| 212 | T | A | -1.4789 | |
| 213 | R | A | -2.1527 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1762 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2895 | |
| 220 | L | A | 0.4989 | |
| 221 | K | A | -1.3124 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9645 | |
| 224 | N | A | -1.5800 | |
| 225 | E | A | -1.3288 | |
| 226 | A | A | -0.6745 | |
| 227 | Y | A | -0.4435 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7025 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1437 | |
| 234 | F | A | 0.0207 | |
| 235 | G | A | -0.8925 | |
| 236 | R | A | -2.5901 | |
| 237 | R | A | -2.7560 | |
| 238 | E | A | -2.0181 | |
| 239 | Q | A | -0.0931 | |
| 240 | V | A | 1.5265 | |
| 241 | Y | A | 1.2231 | |
| 242 | A | A | 0.1288 | |
| 243 | R | A | -1.2451 | |
| 244 | H | A | -1.1880 | |
| 245 | F | A | -0.1505 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.4961 | |
| 249 | S | A | -1.2624 | |
| 250 | G | A | -1.0552 | |
| 251 | P | A | -0.6094 | |
| 252 | V | A | -0.5639 | |
| 253 | G | A | -0.9206 | |
| 254 | H | A | -1.1398 | |
| 255 | P | A | -0.7326 | |
| 256 | L | A | -0.1671 | |
| 257 | P | A | -1.1990 | |
| 258 | D | A | -2.4862 | |
| 259 | D | A | -2.0356 | |
| 260 | P | A | -1.3808 | |
| 261 | P | A | -0.5696 | |
| 262 | P | A | -0.1649 | |
| 263 | S | A | -0.1390 | |
| 264 | P | A | 0.4969 | |
| 265 | L | A | 1.7369 | |
| 266 | Y | A | 1.4438 | |
| 267 | V | A | 1.8091 | |
| 268 | P | A | 1.1082 | |
| 269 | P | A | 0.8301 | |
| 270 | P | A | -0.3843 | |
| 271 | P | A | -0.5987 | |
| 272 | E | A | -1.5100 | |
| 273 | S | A | -0.1687 | |
| 274 | P | A | 0.4700 | |
| 275 | Y | A | 1.9200 | |
| 276 | W | A | 2.0317 | |
| 277 | V | A | 2.5913 | |
| 278 | L | A | 2.0581 | |
| 279 | P | A | 0.6551 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.2842 | |
| 282 | D | A | -0.3387 | |
| 283 | Y | A | 1.0917 | |
| 284 | F | A | 0.8122 | |
| 285 | G | A | 0.1272 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9147 | |
| 291 | L | A | 1.6151 | |
| 292 | V | A | 0.6335 | |
| 293 | S | A | -0.1474 | |
| 294 | S | A | -0.9549 | |
| 295 | D | A | -1.8439 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1034 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6387 | |
| 301 | R | A | -1.8802 | |
| 302 | P | A | -0.9674 | |
| 303 | F | A | -0.1807 | |
| 304 | W | A | -0.5103 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0785 | |
| 307 | R | A | -2.9235 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6564 | |
| 310 | G | A | -1.4189 | |
| 311 | N | A | -1.3918 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9334 | |
| 319 | N | A | -0.9000 | |
| 320 | E | A | -1.0568 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3353 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1890 | |
| 333 | N | A | 0.3827 | |
| 334 | F | A | 1.4683 | |
| 335 | T | A | 0.7440 | |
| 336 | I | A | 0.4057 | |
| 337 | S | A | -0.9734 | |
| 338 | Q | A | -1.7283 | |
| 339 | Q | A | -1.2900 | |
| 340 | L | A | 0.6717 | |
| 341 | C | A | 0.3036 | |
| 342 | T | A | -0.3430 | |
| 343 | P | A | -1.0079 | |
| 344 | E | A | -2.5067 | |
| 345 | D | A | -2.5715 | |
| 346 | N | A | -1.5916 | |
| 347 | V | A | 0.5208 | |
| 348 | Y | A | 0.9536 | |
| 349 | D | A | -0.1243 | |
| 350 | P | A | -0.3816 | |
| 351 | S | A | -0.3122 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7639 | |
| 354 | K | A | -1.7651 | |
| 355 | N | A | -1.7544 | |
| 356 | Y | A | -0.1143 | |
| 357 | L | A | 0.5616 | |
| 358 | R | A | 0.9010 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4519 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0134 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9300 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6614 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3063 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3461 | |
| 376 | L | A | -1.8024 | |
| 377 | D | A | -2.0691 | |
| 378 | P | A | -0.9477 | |
| 379 | G | A | -0.9163 | |
| 380 | V | A | -0.9194 | |
| 381 | L | A | -0.2773 | |
| 382 | A | A | -0.0315 | |
| 383 | H | A | -0.5984 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3619 | |
| 386 | T | A | -0.0038 | |
| 387 | M | A | -0.1141 | |
| 388 | N | A | -0.6370 | |
| 389 | P | A | -0.9845 | |
| 390 | T | A | -1.4464 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4567 | |
| 393 | E | A | -2.9193 | |
| 394 | N | A | -2.7316 | |
| 395 | W | A | -1.6248 | |
| 396 | N | A | -1.3968 | |
| 397 | L | A | -0.3494 | |
| 398 | G | A | 0.4402 | |
| 399 | F | A | 2.3822 | |
| 400 | V | A | 1.8123 | |
| 401 | P | A | 0.0340 | |
| 402 | P | A | -1.9864 | |
| 403 | K | A | -3.4663 | |
| 404 | E | A | -3.9759 | |
| 405 | R | A | -4.3697 | |
| 406 | E | A | -3.9813 | |
| 407 | D | A | -3.0112 | |
| 408 | P | A | -1.8133 | |
| 409 | Y | A | -0.9923 | |
| 410 | K | A | -2.1031 | |
| 411 | G | A | -0.6358 | |
| 412 | L | A | 0.7489 | |
| 413 | I | A | 1.5849 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3862 | |
| 416 | E | A | -1.6508 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9278 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0608 | |
| 421 | E | A | -2.7759 | |
| 422 | R | A | -2.6244 | |
| 423 | F | A | -1.2928 | |
| 424 | S | A | -1.4630 | |
| 425 | Q | A | -1.8756 | |
| 426 | D | A | -2.8921 | |
| 427 | L | A | -2.0007 | |
| 428 | D | A | -2.7865 | |
| 429 | Q | A | -2.6147 | |
| 430 | F | A | -1.4466 | |
| 431 | A | A | -0.8935 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6332 | |
| 435 | K | A | -0.7669 | |
| 436 | F | A | 0.1312 | |
| 437 | L | A | 1.0152 | |
| 438 | Y | A | 0.8073 | |
| 439 | Q | A | -0.2802 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine