Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGSQATDFSSFSLGWFRQAPGQGLEAVAAIDSETNETYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAANDHGVAYINQQSSYQYWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54) [INFO] Main: Simulation completed successfully. (00:00:54) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.7299 | |
2 | V | A | 0.0000 | |
3 | Q | A | -0.8806 | |
4 | L | A | 0.0000 | |
5 | V | A | 1.2319 | |
6 | E | A | 0.4864 | |
7 | S | A | -0.1382 | |
8 | G | A | -0.7214 | |
9 | G | A | 0.1121 | |
10 | G | A | 0.6884 | |
11 | L | A | 1.3940 | |
12 | V | A | -0.1296 | |
13 | Q | A | -1.4523 | |
14 | P | A | -1.8100 | |
15 | G | A | -1.5223 | |
16 | G | A | -1.0000 | |
17 | S | A | -1.2956 | |
18 | L | A | -0.9052 | |
19 | R | A | -2.1417 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.4101 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.0786 | |
24 | A | A | 0.0000 | |
25 | S | A | -0.9882 | |
26 | G | A | -1.3962 | |
27 | S | A | -1.3344 | |
28 | Q | A | -1.7158 | |
29 | A | A | 0.0000 | |
30 | T | A | -1.1604 | |
31 | D | A | -1.6645 | |
32 | F | A | 0.0000 | |
33 | S | A | -1.5475 | |
34 | S | A | -1.4263 | |
35 | F | A | 0.0000 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0000 | |
38 | G | A | 0.0000 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.0000 | |
41 | R | A | 0.0000 | |
42 | Q | A | -0.7059 | |
43 | A | A | -0.9738 | |
44 | P | A | -0.9645 | |
45 | G | A | -1.2912 | |
46 | Q | A | -1.8536 | |
47 | G | A | -1.2570 | |
48 | L | A | -0.5200 | |
49 | E | A | -1.0062 | |
50 | A | A | -0.6197 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | A | A | 0.0000 | |
54 | I | A | 0.0000 | |
55 | D | A | 0.0000 | |
56 | S | A | -1.5374 | |
57 | E | A | -2.3043 | |
58 | T | A | -1.7786 | |
59 | N | A | -2.2997 | |
60 | E | A | -2.0611 | |
61 | T | A | -0.7696 | |
62 | Y | A | -0.1247 | |
63 | Y | A | -0.5956 | |
64 | A | A | -1.3754 | |
65 | D | A | -2.4414 | |
66 | S | A | -1.7476 | |
67 | V | A | 0.0000 | |
68 | K | A | -2.5715 | |
69 | G | A | -1.7558 | |
70 | R | A | -1.5198 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.7914 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.6351 | |
75 | R | A | -1.2867 | |
76 | D | A | -1.8714 | |
77 | N | A | -2.2915 | |
78 | S | A | -1.8451 | |
79 | K | A | -2.5376 | |
80 | N | A | -2.0629 | |
81 | T | A | 0.0000 | |
82 | L | A | 0.0000 | |
83 | Y | A | -0.6385 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.2975 | |
86 | M | A | 0.0000 | |
87 | N | A | -1.4902 | |
88 | S | A | -1.3728 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.9166 | |
91 | A | A | -2.0326 | |
92 | E | A | -2.4639 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.4848 | |
95 | A | A | 0.0000 | |
96 | V | A | 0.8871 | |
97 | Y | A | 0.0000 | |
98 | Y | A | 0.3459 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | A | A | 0.0000 | |
102 | N | A | 0.0000 | |
103 | D | A | -1.5999 | |
104 | H | A | -1.5774 | |
105 | G | A | -0.2934 | |
106 | V | A | 0.9052 | |
107 | A | A | 0.0000 | |
108 | Y | A | 0.8381 | |
109 | I | A | 0.1282 | |
110 | N | A | -1.4705 | |
111 | Q | A | -1.3009 | |
112 | Q | A | -1.2838 | |
113 | S | A | -1.0768 | |
114 | S | A | -0.7542 | |
115 | Y | A | 0.0000 | |
116 | Q | A | -1.2426 | |
117 | Y | A | -0.5491 | |
118 | W | A | 0.1072 | |
119 | G | A | 0.0288 | |
120 | Q | A | -0.7814 | |
121 | G | A | 0.1134 | |
122 | T | A | 0.6472 | |
123 | L | A | 1.7539 | |
124 | V | A | 0.0000 | |
125 | T | A | 0.3324 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.7729 | |
128 | S | A | -0.5013 |