Project name: KAP3

Status: done

Started: 2026-07-08 19:08:40
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Chain sequence(s) A: MDCSASRSCSVPTGPATTICSSDKSCRCGVSLPSTCPHTVWLLEPICCDNCPPPSPQPCVPTCFLLNSCQPTPGLETLNLTTFTQGAVSTRIRWSRPDCRVEG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-2.8161
Maximal score value
1.5214
Average score
-0.5764
Total score value
-59.3666

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1530
2 D A -1.3260
3 C A -0.5160
4 S A -0.8540
5 A A -1.1473
6 S A -1.1124
7 R A -1.9111
8 S A -1.0939
9 C A -0.1632
10 S A -0.3810
11 V A 0.4858
12 P A -0.1419
13 T A -0.2795
14 G A -0.4943
15 P A -0.4088
16 A A -0.0864
17 T A 0.2494
18 T A 0.0000
19 I A 1.4447
20 C A 0.4119
21 S A -0.5984
22 S A -1.6211
23 D A -2.7442
24 K A -2.8161
25 S A -1.8794
26 C A -2.1435
27 R A -2.0164
28 C A 0.0000
29 G A 0.0000
30 V A 0.1746
31 S A -0.0576
32 L A 0.2838
33 P A -0.1240
34 S A -0.1674
35 T A -0.2022
36 C A -0.0146
37 P A -0.5063
38 H A -0.7925
39 T A 0.0453
40 V A 0.8532
41 W A 0.6313
42 L A 0.5437
43 L A -0.1627
44 E A -1.4006
45 P A -0.4253
46 I A 0.0639
47 C A -0.1174
48 C A -0.9065
49 D A -2.1396
50 N A -2.1674
51 C A -0.8587
52 P A -0.7453
53 P A -0.8173
54 P A -0.5405
55 S A -0.7806
56 P A -0.6331
57 Q A -0.7935
58 P A 0.0497
59 C A 0.6355
60 V A 0.5961
61 P A -0.0449
62 T A 0.2729
63 C A 0.0000
64 F A 0.0000
65 L A 0.0000
66 L A 0.0000
67 N A 0.1578
68 S A 0.0000
69 C A 0.0028
70 Q A 0.0488
71 P A -0.4148
72 T A 0.0000
73 P A -0.6244
74 G A -0.8606
75 L A -0.8104
76 E A -1.9658
77 T A -1.5749
78 L A -1.2209
79 N A -2.1109
80 L A -0.9797
81 T A -0.6223
82 T A 0.5318
83 F A 1.5214
84 T A 0.6097
85 Q A -0.7392
86 G A -0.2619
87 A A 0.6344
88 V A 1.4180
89 S A 0.3537
90 T A -0.3847
91 R A -2.0459
92 I A -1.5576
93 R A -2.6432
94 W A -1.6074
95 S A -1.6300
96 R A -1.5654
97 P A -1.6211
98 D A -2.0641
99 C A -1.2789
100 R A -1.8384
101 V A -0.2304
102 E A -1.6550
103 G A -1.0990
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Laboratory of Theory of Biopolymers 2018