| Chain sequence(s) |
A: MDCSASRSCSVPTGPATTICSSDKSCRCGVSLPSTCPHTVWLLEPICCDNCPPPSPQPCVPTCFLLNSCQPTPGLETLNLTTFTQGAVSTRIRWSRPDCRVEG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1530 | |
| 2 | D | A | -1.3260 | |
| 3 | C | A | -0.5160 | |
| 4 | S | A | -0.8540 | |
| 5 | A | A | -1.1473 | |
| 6 | S | A | -1.1124 | |
| 7 | R | A | -1.9111 | |
| 8 | S | A | -1.0939 | |
| 9 | C | A | -0.1632 | |
| 10 | S | A | -0.3810 | |
| 11 | V | A | 0.4858 | |
| 12 | P | A | -0.1419 | |
| 13 | T | A | -0.2795 | |
| 14 | G | A | -0.4943 | |
| 15 | P | A | -0.4088 | |
| 16 | A | A | -0.0864 | |
| 17 | T | A | 0.2494 | |
| 18 | T | A | 0.0000 | |
| 19 | I | A | 1.4447 | |
| 20 | C | A | 0.4119 | |
| 21 | S | A | -0.5984 | |
| 22 | S | A | -1.6211 | |
| 23 | D | A | -2.7442 | |
| 24 | K | A | -2.8161 | |
| 25 | S | A | -1.8794 | |
| 26 | C | A | -2.1435 | |
| 27 | R | A | -2.0164 | |
| 28 | C | A | 0.0000 | |
| 29 | G | A | 0.0000 | |
| 30 | V | A | 0.1746 | |
| 31 | S | A | -0.0576 | |
| 32 | L | A | 0.2838 | |
| 33 | P | A | -0.1240 | |
| 34 | S | A | -0.1674 | |
| 35 | T | A | -0.2022 | |
| 36 | C | A | -0.0146 | |
| 37 | P | A | -0.5063 | |
| 38 | H | A | -0.7925 | |
| 39 | T | A | 0.0453 | |
| 40 | V | A | 0.8532 | |
| 41 | W | A | 0.6313 | |
| 42 | L | A | 0.5437 | |
| 43 | L | A | -0.1627 | |
| 44 | E | A | -1.4006 | |
| 45 | P | A | -0.4253 | |
| 46 | I | A | 0.0639 | |
| 47 | C | A | -0.1174 | |
| 48 | C | A | -0.9065 | |
| 49 | D | A | -2.1396 | |
| 50 | N | A | -2.1674 | |
| 51 | C | A | -0.8587 | |
| 52 | P | A | -0.7453 | |
| 53 | P | A | -0.8173 | |
| 54 | P | A | -0.5405 | |
| 55 | S | A | -0.7806 | |
| 56 | P | A | -0.6331 | |
| 57 | Q | A | -0.7935 | |
| 58 | P | A | 0.0497 | |
| 59 | C | A | 0.6355 | |
| 60 | V | A | 0.5961 | |
| 61 | P | A | -0.0449 | |
| 62 | T | A | 0.2729 | |
| 63 | C | A | 0.0000 | |
| 64 | F | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | N | A | 0.1578 | |
| 68 | S | A | 0.0000 | |
| 69 | C | A | 0.0028 | |
| 70 | Q | A | 0.0488 | |
| 71 | P | A | -0.4148 | |
| 72 | T | A | 0.0000 | |
| 73 | P | A | -0.6244 | |
| 74 | G | A | -0.8606 | |
| 75 | L | A | -0.8104 | |
| 76 | E | A | -1.9658 | |
| 77 | T | A | -1.5749 | |
| 78 | L | A | -1.2209 | |
| 79 | N | A | -2.1109 | |
| 80 | L | A | -0.9797 | |
| 81 | T | A | -0.6223 | |
| 82 | T | A | 0.5318 | |
| 83 | F | A | 1.5214 | |
| 84 | T | A | 0.6097 | |
| 85 | Q | A | -0.7392 | |
| 86 | G | A | -0.2619 | |
| 87 | A | A | 0.6344 | |
| 88 | V | A | 1.4180 | |
| 89 | S | A | 0.3537 | |
| 90 | T | A | -0.3847 | |
| 91 | R | A | -2.0459 | |
| 92 | I | A | -1.5576 | |
| 93 | R | A | -2.6432 | |
| 94 | W | A | -1.6074 | |
| 95 | S | A | -1.6300 | |
| 96 | R | A | -1.5654 | |
| 97 | P | A | -1.6211 | |
| 98 | D | A | -2.0641 | |
| 99 | C | A | -1.2789 | |
| 100 | R | A | -1.8384 | |
| 101 | V | A | -0.2304 | |
| 102 | E | A | -1.6550 | |
| 103 | G | A | -1.0990 |