Project name: 8cc177f3c6d8a94

Status: done

Started: 2024-06-11 08:36:39
Settings
Chain sequence(s) A: KCVSYGVAQIKAPALHSSQGYTGSNVKVAVLDSGIDSSHPDLNVAGGASFVPSETNPFQDNNSHGTHVAGTVLAVAPSASLYAVKVLGADGSGQYSWVINGIEWAIANNMDVINMSLGGPSGSAALKAAVDKAVASGVVVVAAAGNSGTSGSSSTVSYPAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKYGAHSGTCPASNHVAGAAALILSKHPNNWTNTQVRSSLENTATKLGDSFYYGKGLINVEAAAQHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:57)
Show buried residues

Minimal score value
-2.7814
Maximal score value
1.5586
Average score
-0.5438
Total score value
-145.7256

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 K A -1.2158
3 C A 0.4056
4 V A 1.5586
5 S A 0.8671
6 Y A 0.6686
7 G A 0.0000
8 V A 0.2169
9 A A -0.1237
10 Q A -0.3921
11 I A 0.0000
12 K A -1.1181
13 A A 0.0000
14 P A -0.7400
15 A A -0.9023
16 L A 0.0000
17 H A -1.0182
18 S A -1.0061
19 Q A -1.5752
20 G A -1.1431
21 Y A -0.6446
22 T A -0.6234
23 G A 0.0000
24 S A -1.0470
25 N A -1.6263
26 V A 0.0000
27 K A -1.3153
28 V A 0.0000
29 A A 0.0000
30 V A 0.0000
31 L A 0.0000
32 D A 0.0000
33 S A 0.0000
34 G A 0.0000
35 I A 0.0000
36 D A -0.9673
37 S A -0.8974
38 S A -0.9611
39 H A 0.0000
40 P A -1.7225
41 D A -2.4420
42 L A 0.0000
43 N A -1.7018
44 V A -0.5387
45 A A -0.2742
46 G A -0.1679
47 G A -0.1642
48 A A -0.2061
49 S A -0.3990
50 F A -0.1743
51 V A 0.0000
52 P A -0.4285
53 S A -0.5535
54 E A -0.9991
55 T A -0.8150
56 N A -1.3342
57 P A -0.7553
58 F A -0.4411
59 Q A -1.4829
60 D A 0.0000
61 N A -1.8870
62 N A -1.6960
63 S A -1.0136
64 H A -0.7203
65 G A 0.0000
66 T A 0.0000
67 H A 0.0000
68 V A 0.0000
69 A A 0.0000
70 G A -0.3913
71 T A 0.0000
72 V A 0.0000
73 L A -0.3760
74 A A -0.1060
75 V A 0.0000
85 A A 0.0000
86 P A -0.5708
87 S A -0.7068
88 A A 0.0000
89 S A -0.7960
90 L A 0.0000
91 Y A -0.0440
92 A A 0.0000
93 V A 0.0000
94 K A 0.0000
95 V A 0.0000
96 L A 0.0000
97 G A -1.3136
98 A A -1.7789
99 D A -2.3043
100 G A -1.4980
101 S A -1.2448
102 G A -1.0767
103 Q A -1.0805
104 Y A -0.4403
105 S A -0.4522
106 W A -0.5314
107 V A 0.0000
108 I A -0.7706
109 N A -1.3152
110 G A 0.0000
111 I A 0.0000
112 E A -2.1602
113 W A -1.1478
114 A A 0.0000
115 I A -1.1204
116 A A -0.9007
117 N A -1.4346
118 N A -1.7075
119 M A 0.0000
120 D A -1.2983
121 V A 0.0000
122 I A 0.0000
123 N A 0.0000
124 M A 0.0000
125 S A 0.0000
126 L A -0.0501
127 G A -0.3933
128 G A -0.4204
129 P A -0.5684
130 S A -0.5357
131 G A -0.5294
132 S A -0.2949
133 A A -0.2600
134 A A -0.1871
135 L A 0.0000
136 K A -1.2138
137 A A -0.8575
138 A A 0.0000
139 V A 0.0000
140 D A -1.3333
141 K A -1.9291
142 A A 0.0000
143 V A -0.4219
144 A A -0.5821
145 S A -0.7762
146 G A -0.7169
147 V A 0.0000
148 V A 0.0000
149 V A 0.0000
150 V A 0.0000
151 A A 0.0000
152 A A 0.0000
153 A A 0.0000
154 G A -0.8015
155 N A -1.3294
156 S A -0.8787
157 G A -0.5254
158 T A -0.5199
159 S A -0.6430
160 G A -0.7578
161 S A -0.5675
162 S A -0.5288
163 S A -0.4723
164 T A -0.7039
165 V A 0.0000
166 S A -0.6860
167 Y A -0.4721
168 P A 0.0000
169 A A 0.0000
170 K A -1.0819
171 Y A 0.0000
172 P A -0.7198
173 S A -0.5962
174 V A 0.0000
175 I A 0.0000
176 A A 0.0000
177 V A 0.0000
178 G A 0.0000
179 A A 0.0000
180 V A 0.0000
181 D A -1.0868
182 S A -0.7998
183 S A -1.0794
184 N A -1.3474
185 Q A -1.7990
186 R A -0.9780
187 A A 0.0000
188 P A -0.5395
189 F A -0.3950
190 S A 0.0000
191 S A 0.0000
192 V A 0.0000
193 G A 0.0000
194 P A -0.4368
195 E A -0.7576
196 L A 0.0000
197 D A -1.0050
198 V A 0.0000
199 M A 0.0000
200 A A 0.0000
201 P A 0.0000
202 G A 0.0000
203 V A -0.0107
204 S A 0.0803
205 I A 0.0000
206 C A 0.4320
207 S A 0.0000
208 T A 0.0000
209 L A -0.6004
210 P A -1.1713
211 G A -1.1517
212 G A -1.5900
213 K A -2.1644
214 Y A -0.6628
215 G A -0.2788
216 A A 0.0512
217 H A -0.3781
218 S A -0.3892
219 G A 0.0000
220 T A 0.0000
221 C A -0.2174
222 P A 0.0000
223 A A 0.0000
224 S A 0.0000
225 N A 0.0000
226 H A 0.0000
227 V A 0.0000
228 A A 0.0000
229 G A 0.0000
230 A A 0.0000
231 A A 0.0000
232 A A 0.0000
233 L A 0.0000
234 I A 0.0000
235 L A 0.0000
236 S A -0.8490
237 K A -1.0896
238 H A -1.0607
239 P A -1.2771
240 N A -1.5163
241 W A -0.9070
242 T A -0.7326
243 N A -0.6423
244 T A -0.5285
245 Q A -1.0661
246 V A 0.0000
247 R A -0.8239
248 S A -1.1666
249 S A 0.0000
250 L A 0.0000
251 E A -1.7037
252 N A -2.1764
253 T A -1.5279
254 A A -1.5165
255 T A -1.4361
256 K A -2.5968
257 L A -1.6652
258 G A -1.7670
259 D A -2.1634
260 S A -1.5640
261 F A -0.5303
262 Y A -0.3016
263 Y A -1.1584
264 G A 0.0000
265 K A -2.7814
266 G A 0.0000
267 L A 0.0000
268 I A 0.0000
269 N A -0.8824
270 V A 0.0000
271 E A -1.3879
272 A A -1.1227
273 A A 0.0000
274 A A 0.0000
275 Q A -1.7598
276 H A -1.8089
277 H A -1.8128
301 H A -1.6885
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Laboratory of Theory of Biopolymers 2018