| Chain sequence(s) |
B: LAEVKAFVDGVMAATKVMAEMAKQNGNEELLKKVKEFQKKMEAKGKEILA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:16)
[INFO] Main: Simulation completed successfully. (00:02:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.2947 | |
| 2 | A | B | -0.0483 | |
| 3 | E | B | -1.1507 | |
| 4 | V | B | 0.1241 | |
| 5 | K | B | -0.8294 | |
| 6 | A | B | -0.4887 | |
| 7 | F | B | 0.4909 | |
| 8 | V | B | 0.0000 | |
| 9 | D | B | -1.2634 | |
| 10 | G | B | -0.4741 | |
| 11 | V | B | -0.2001 | |
| 12 | M | B | -0.5981 | |
| 13 | A | B | -0.1776 | |
| 14 | A | B | 0.0642 | |
| 15 | T | B | 0.0000 | |
| 16 | K | B | -1.1684 | |
| 17 | V | B | 0.5067 | |
| 18 | M | B | -0.0317 | |
| 19 | A | B | 0.0000 | |
| 20 | E | B | -2.2370 | |
| 21 | M | B | -1.3123 | |
| 22 | A | B | 0.0000 | |
| 23 | K | B | -3.8517 | |
| 24 | Q | B | -3.2525 | |
| 25 | N | B | -3.1010 | |
| 26 | G | B | -3.1288 | |
| 27 | N | B | -3.3828 | |
| 28 | E | B | -4.3453 | |
| 29 | E | B | -3.9785 | |
| 30 | L | B | -2.8776 | |
| 31 | L | B | -3.8239 | |
| 32 | K | B | -4.3205 | |
| 33 | K | B | -3.6746 | |
| 34 | V | B | 0.0000 | |
| 35 | K | B | -3.5623 | |
| 36 | E | B | -3.9052 | |
| 37 | F | B | -2.2968 | |
| 38 | Q | B | -3.1191 | |
| 39 | K | B | -3.8118 | |
| 40 | K | B | -3.7601 | |
| 41 | M | B | 0.0000 | |
| 42 | E | B | -3.7954 | |
| 43 | A | B | -3.0559 | |
| 44 | K | B | -3.0425 | |
| 45 | G | B | 0.0000 | |
| 46 | K | B | -3.1405 | |
| 47 | E | B | -2.6292 | |
| 48 | I | B | -0.5884 | |
| 49 | L | B | -0.1095 | |
| 50 | A | B | -0.5215 |