| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYQHCGPDDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRCGPDGHPLPDAPPPSPLYVPPPASSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9448 | |
| 2 | L | A | 1.9674 | |
| 3 | P | A | 0.6539 | |
| 4 | P | A | 0.3617 | |
| 5 | T | A | 0.1170 | |
| 6 | T | A | 0.1300 | |
| 7 | P | A | 0.1736 | |
| 8 | V | A | 1.2141 | |
| 9 | A | A | 0.0131 | |
| 10 | K | A | -1.1859 | |
| 11 | V | A | -0.4620 | |
| 12 | Q | A | -1.5701 | |
| 13 | S | A | -1.6182 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4081 | |
| 16 | E | A | -2.4363 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4589 | |
| 20 | P | A | 0.1105 | |
| 21 | T | A | 0.1179 | |
| 22 | S | A | -0.1688 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0906 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1158 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.5548 | |
| 31 | R | A | -2.5174 | |
| 32 | L | A | -0.7008 | |
| 33 | L | A | 1.2444 | |
| 34 | T | A | 1.4575 | |
| 35 | V | A | 1.9940 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2245 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6178 | |
| 40 | K | A | -1.6411 | |
| 41 | D | A | -0.9485 | |
| 42 | I | A | 0.8120 | |
| 43 | V | A | 1.0027 | |
| 44 | K | A | -1.1977 | |
| 45 | N | A | -1.9302 | |
| 46 | G | A | -1.2338 | |
| 47 | K | A | -0.9474 | |
| 48 | V | A | 1.4982 | |
| 49 | V | A | 2.0587 | |
| 50 | V | A | 1.2905 | |
| 51 | P | A | 0.4833 | |
| 52 | K | A | -0.6194 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1363 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4656 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2696 | |
| 70 | K | A | -1.8101 | |
| 71 | F | A | -0.6634 | |
| 72 | A | A | -0.5808 | |
| 73 | L | A | -0.8775 | |
| 74 | P | A | -1.2692 | |
| 75 | Q | A | -2.4762 | |
| 76 | K | A | -3.0953 | |
| 77 | D | A | -2.9899 | |
| 78 | F | A | -1.6442 | |
| 79 | Y | A | -1.9213 | |
| 80 | D | A | -2.7622 | |
| 81 | P | A | -2.3564 | |
| 82 | E | A | -3.0736 | |
| 83 | K | A | -3.4489 | |
| 84 | E | A | -2.5138 | |
| 85 | R | A | -1.3169 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6508 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9631 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3194 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6768 | |
| 99 | G | A | -0.5343 | |
| 100 | P | A | -0.4179 | |
| 101 | L | A | 0.0119 | |
| 102 | G | A | -0.2775 | |
| 103 | K | A | -0.7501 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4603 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0834 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1531 | |
| 110 | L | A | -0.1373 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3196 | |
| 113 | K | A | -0.6571 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7702 | |
| 117 | T | A | -1.4948 | |
| 118 | E | A | -2.7140 | |
| 119 | N | A | -2.6443 | |
| 120 | P | A | -2.1733 | |
| 121 | T | A | -1.6927 | |
| 122 | E | A | -2.2555 | |
| 123 | Y | A | -0.9381 | |
| 124 | Q | A | -1.3912 | |
| 125 | H | A | -1.0632 | |
| 126 | C | A | -0.9550 | |
| 127 | G | A | -1.2989 | |
| 128 | P | A | -1.4719 | |
| 129 | D | A | -2.3045 | |
| 130 | D | A | -1.8481 | |
| 131 | R | A | -1.5382 | |
| 132 | V | A | -0.5383 | |
| 133 | N | A | -0.8977 | |
| 134 | F | A | -0.3662 | |
| 135 | S | A | -0.3505 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7180 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2196 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5523 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2236 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1828 | |
| 157 | D | A | 0.3783 | |
| 158 | L | A | 0.8914 | |
| 159 | A | A | 0.2272 | |
| 160 | E | A | -1.4176 | |
| 161 | P | A | -0.1855 | |
| 162 | C | A | 0.1898 | |
| 163 | P | A | -0.1640 | |
| 164 | G | A | -0.0610 | |
| 165 | L | A | 0.6116 | |
| 166 | P | A | -0.1034 | |
| 167 | P | A | -0.3345 | |
| 168 | G | A | -0.4121 | |
| 169 | A | A | -0.0059 | |
| 170 | C | A | 0.6868 | |
| 171 | P | A | 0.5638 | |
| 172 | P | A | 0.8413 | |
| 173 | I | A | 2.0875 | |
| 174 | Q | A | 0.9013 | |
| 175 | L | A | 1.5062 | |
| 176 | V | A | 0.8557 | |
| 177 | N | A | -0.3240 | |
| 178 | S | A | 0.0271 | |
| 179 | V | A | 0.4274 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3735 | |
| 182 | D | A | 0.0772 | |
| 183 | G | A | -0.1608 | |
| 184 | D | A | -0.5388 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1428 | |
| 190 | F | A | 0.0598 | |
| 191 | G | A | -0.1057 | |
| 192 | N | A | -0.2601 | |
| 193 | M | A | -0.1051 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4102 | |
| 197 | E | A | -2.6212 | |
| 198 | L | A | -1.2132 | |
| 199 | Q | A | -2.5622 | |
| 200 | Q | A | -3.3430 | |
| 201 | D | A | -3.6058 | |
| 202 | R | A | -3.3421 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2192 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3608 | |
| 211 | S | A | -1.8853 | |
| 212 | T | A | -1.4264 | |
| 213 | R | A | -2.0610 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1643 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3047 | |
| 220 | L | A | 0.5190 | |
| 221 | K | A | -1.2737 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9548 | |
| 224 | N | A | -1.6868 | |
| 225 | E | A | -1.3226 | |
| 226 | A | A | -0.6893 | |
| 227 | Y | A | -0.4601 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6959 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1342 | |
| 234 | F | A | 0.0352 | |
| 235 | G | A | -0.9425 | |
| 236 | R | A | -2.7119 | |
| 237 | R | A | -3.0274 | |
| 238 | E | A | -2.1737 | |
| 239 | Q | A | -0.1767 | |
| 240 | V | A | 1.5404 | |
| 241 | Y | A | 1.2230 | |
| 242 | A | A | 0.1242 | |
| 243 | R | A | -1.4303 | |
| 244 | H | A | -1.2662 | |
| 245 | F | A | -0.2628 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5417 | |
| 249 | C | A | -1.0055 | |
| 250 | G | A | -0.8894 | |
| 251 | P | A | -0.8633 | |
| 252 | D | A | -1.3130 | |
| 253 | G | A | -1.2675 | |
| 254 | H | A | -1.4508 | |
| 255 | P | A | -1.2324 | |
| 256 | L | A | -0.0506 | |
| 257 | P | A | -0.8256 | |
| 258 | D | A | -1.8687 | |
| 259 | A | A | -0.5597 | |
| 260 | P | A | -0.7021 | |
| 261 | P | A | -0.3725 | |
| 262 | P | A | 0.0623 | |
| 263 | S | A | 0.2706 | |
| 264 | P | A | 0.6973 | |
| 265 | L | A | 1.9350 | |
| 266 | Y | A | 1.5908 | |
| 267 | V | A | 1.9513 | |
| 268 | P | A | 0.9344 | |
| 269 | P | A | 0.6959 | |
| 270 | P | A | -0.0117 | |
| 271 | A | A | 0.1716 | |
| 272 | S | A | -0.1770 | |
| 273 | S | A | 0.2896 | |
| 274 | P | A | 0.4106 | |
| 275 | Y | A | 1.3305 | |
| 276 | A | A | 1.1771 | |
| 277 | V | A | 1.9513 | |
| 278 | P | A | 1.0106 | |
| 279 | P | A | 0.0992 | |
| 280 | P | A | -0.4330 | |
| 281 | T | A | -0.4351 | |
| 282 | D | A | -0.7757 | |
| 283 | Y | A | 0.9221 | |
| 284 | F | A | 0.7416 | |
| 285 | G | A | 0.0311 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9004 | |
| 291 | L | A | 1.5998 | |
| 292 | V | A | 0.5977 | |
| 293 | S | A | -0.1649 | |
| 294 | S | A | -0.9712 | |
| 295 | D | A | -1.8455 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1582 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6407 | |
| 301 | R | A | -1.8888 | |
| 302 | P | A | -0.9655 | |
| 303 | F | A | -0.1868 | |
| 304 | W | A | -0.5206 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0848 | |
| 307 | R | A | -2.9211 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7776 | |
| 310 | G | A | -1.4122 | |
| 311 | N | A | -1.3945 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9082 | |
| 319 | N | A | -0.8902 | |
| 320 | E | A | -1.0531 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3647 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1742 | |
| 333 | N | A | 0.4086 | |
| 334 | F | A | 1.4775 | |
| 335 | T | A | 0.7439 | |
| 336 | I | A | 0.3930 | |
| 337 | S | A | -0.9693 | |
| 338 | Q | A | -1.6627 | |
| 339 | Q | A | -1.1926 | |
| 340 | L | A | 0.4438 | |
| 341 | S | A | 0.1918 | |
| 342 | T | A | -0.0213 | |
| 343 | P | A | -0.2724 | |
| 344 | A | A | -0.1076 | |
| 345 | I | A | 0.5604 | |
| 346 | N | A | 0.0077 | |
| 347 | V | A | 1.6913 | |
| 348 | Y | A | 1.4976 | |
| 349 | D | A | -0.0650 | |
| 350 | P | A | -0.7224 | |
| 351 | S | A | -0.5646 | |
| 352 | N | A | -0.3121 | |
| 353 | F | A | -0.8897 | |
| 354 | K | A | -1.9062 | |
| 355 | N | A | -1.7637 | |
| 356 | Y | A | -0.1231 | |
| 357 | L | A | 0.5705 | |
| 358 | R | A | 0.9159 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4729 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0254 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8701 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6398 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2753 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3290 | |
| 376 | L | A | -1.7583 | |
| 377 | D | A | -2.0399 | |
| 378 | P | A | -1.0653 | |
| 379 | G | A | -1.0216 | |
| 380 | V | A | -0.9312 | |
| 381 | L | A | -0.5408 | |
| 382 | A | A | -0.6588 | |
| 383 | H | A | -0.8568 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4020 | |
| 386 | T | A | -0.5785 | |
| 387 | M | A | -0.3379 | |
| 388 | N | A | -0.8701 | |
| 389 | P | A | -1.2694 | |
| 390 | T | A | -1.5189 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5024 | |
| 393 | E | A | -2.8777 | |
| 394 | N | A | -2.6059 | |
| 395 | W | A | -1.4723 | |
| 396 | N | A | -1.1067 | |
| 397 | L | A | -0.1574 | |
| 398 | G | A | 0.5639 | |
| 399 | F | A | 2.4329 | |
| 400 | V | A | 1.8605 | |
| 401 | P | A | 0.0692 | |
| 402 | P | A | -1.9087 | |
| 403 | K | A | -3.4089 | |
| 404 | E | A | -3.8719 | |
| 405 | R | A | -4.1517 | |
| 406 | E | A | -3.8614 | |
| 407 | D | A | -2.8718 | |
| 408 | P | A | -1.7690 | |
| 409 | Y | A | -0.9755 | |
| 410 | K | A | -2.0975 | |
| 411 | G | A | -0.6286 | |
| 412 | L | A | 0.6728 | |
| 413 | I | A | 1.5847 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3931 | |
| 416 | E | A | -1.6662 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8585 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9106 | |
| 421 | E | A | -2.5323 | |
| 422 | R | A | -2.1083 | |
| 423 | F | A | -1.0468 | |
| 424 | S | A | -1.3224 | |
| 425 | Q | A | -1.8206 | |
| 426 | D | A | -2.8645 | |
| 427 | L | A | -1.9591 | |
| 428 | D | A | -2.7337 | |
| 429 | Q | A | -2.5861 | |
| 430 | F | A | -1.4238 | |
| 431 | A | A | -0.8825 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5320 | |
| 435 | K | A | -0.6928 | |
| 436 | F | A | 0.1702 | |
| 437 | L | A | 1.0509 | |
| 438 | Y | A | 0.8424 | |
| 439 | Q | A | -0.2574 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine