Project name: Rat IAPP_20

Status: done

Started: 2026-06-25 14:19:23
Settings
Chain sequence(s) A: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
C: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
B: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
E: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
D: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
G: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
F: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
I: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
H: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
K: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
J: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
M: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
L: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
O: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
N: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
Q: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
P: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
S: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
R: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
T: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:07)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:07)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:07)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:07)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:07)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:17:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:17:31)
Show buried residues

Minimal score value
-3.5069
Maximal score value
2.1684
Average score
-0.6423
Total score value
-475.3031

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.5963
2 C A -0.9906
3 N A -1.4897
4 T A -0.8230
5 A A -0.5958
6 T A -0.8782
7 C A -1.1324
8 A A 0.0000
9 T A 0.0000
10 Q A -1.6810
11 R A -2.2721
12 L A 0.0000
13 A A 0.0000
14 N A -2.1720
15 F A 0.0000
16 L A 0.0000
17 V A -0.8096
18 R A -2.2247
19 S A 0.0000
20 S A -0.5530
21 N A -2.0884
22 N A -1.5751
23 L A 0.3593
24 G A 0.1925
25 P A 0.3574
26 V A 2.1684
27 L A 0.0000
28 P A -0.0700
29 P A -0.9870
30 T A -0.9520
31 N A -1.3323
32 V A -0.6679
33 G A -1.0811
34 S A -0.8472
35 N A -1.1323
36 T A -0.5321
37 Y A 0.7084
1 K B -1.6744
2 C B -0.8701
3 N B -1.3614
4 T B -0.7944
5 A B -0.4346
6 T B -0.6318
7 C B -0.7569
8 A B -0.4778
9 T B -0.5309
10 Q B -1.1471
11 R B -0.9640
12 L B 0.3202
13 A B 0.0484
14 N B -0.4364
15 F B 0.0000
16 L B 0.6288
17 V B 0.3821
18 R B 0.0000
19 S B 0.0000
20 S B 0.0000
21 N B 0.0000
22 N B 0.0000
23 L B 0.0000
24 G B 0.0000
25 P B 0.9173
26 V B 1.9210
27 L B 2.0279
28 P B 1.0390
29 P B 0.3513
30 T B -0.3833
31 N B -0.6809
32 V B -0.3998
33 G B 0.0000
34 S B -0.8074
35 N B -1.1012
36 T B -0.1072
37 Y B 0.7037
1 K C -2.6007
2 C C -1.9098
3 N C -2.0136
4 T C -1.4021
5 A C -0.9156
6 T C -1.0326
7 C C 0.0000
8 A C 0.0000
9 T C 0.0000
10 Q C -0.8170
11 R C -1.0562
12 L C 0.0000
13 A C -0.8126
14 N C -1.4464
15 F C 0.0000
16 L C 0.0000
17 V C -1.6381
18 R C -2.8977
19 S C 0.0000
20 S C 0.0000
21 N C -2.7289
22 N C -2.9197
23 L C 0.0000
24 G C -0.4926
25 P C 0.3991
26 V C 0.8610
27 L C 0.0000
28 P C 0.0000
29 P C 0.0000
30 T C 0.0000
31 N C 0.0000
32 V C -0.9070
33 G C -1.4177
34 S C -1.5323
35 N C -2.1971
36 T C -0.4607
37 Y C 0.5253
1 K D -1.1724
2 C D -0.3771
3 N D -0.7495
4 T D -0.5987
5 A D -0.8198
6 T D 0.0000
7 C D -0.4299
8 A D 0.0000
9 T D 0.0000
10 Q D -0.6796
11 R D -1.1585
12 L D 0.0000
13 A D 0.0000
14 N D -1.1804
15 F D 0.0000
16 L D 0.0000
17 V D -1.8251
18 R D -2.6540
19 S D 0.0000
20 S D 0.0000
21 N D -3.1831
22 N D -2.7728
23 L D -1.5952
24 G D -0.8249
25 P D 0.0000
26 V D 0.0000
27 L D 0.0000
28 P D 0.0000
29 P D 0.0000
30 T D 0.0000
31 N D -1.0121
32 V D 0.0000
33 G D -0.9096
34 S D -1.1418
35 N D -1.3137
36 T D -0.5875
37 Y D 0.3056
1 K E -1.2946
2 C E -0.5145
3 N E -0.8119
4 T E -0.6964
5 A E 0.0000
6 T E 0.0000
7 C E -0.5997
8 A E 0.0000
9 T E 0.0000
10 Q E -0.7224
11 R E -1.1538
12 L E 0.0000
13 A E 0.0000
14 N E -1.1184
15 F E 0.0000
16 L E 0.0000
17 V E 0.0000
18 R E -1.9803
19 S E 0.0000
20 S E 0.0000
21 N E -2.7307
22 N E -2.7140
23 L E 0.0000
24 G E -0.4853
25 P E 0.0000
26 V E 0.9851
27 L E 0.0000
28 P E 0.0975
29 P E -0.5851
30 T E -0.9892
31 N E -1.6587
32 V E -1.0151
33 G E -1.1001
34 S E -1.1832
35 N E -1.3250
36 T E -0.5458
37 Y E 0.3844
1 K F -1.2149
2 C F -0.4392
3 N F -0.6879
4 T F -0.7513
5 A F 0.0000
6 T F 0.0000
7 C F -0.5366
8 A F 0.0000
9 T F 0.0000
10 Q F -0.7935
11 R F -1.4783
12 L F 0.0000
13 A F 0.0000
14 N F -1.4462
15 F F 0.0000
16 L F 0.0000
17 V F -1.7493
18 R F -2.8548
19 S F 0.0000
20 S F 0.0000
21 N F -2.7405
22 N F -2.7076
23 L F 0.0000
24 G F -0.7051
25 P F 0.0000
26 V F 0.0000
27 L F 0.0000
28 P F -0.1109
29 P F -0.6938
30 T F -1.0104
31 N F -1.6982
32 V F -0.8651
33 G F -1.1475
34 S F -1.0340
35 N F -1.1460
36 T F -0.4759
37 Y F 0.5512
1 K G -1.2339
2 C G -0.0960
3 N G -0.4481
4 T G -0.3574
5 A G 0.0000
6 T G -0.4874
7 C G -0.3938
8 A G 0.0000
9 T G 0.0000
10 Q G -0.9142
11 R G -1.6108
12 L G 0.0000
13 A G 0.0000
14 N G -2.1087
15 F G 0.0000
16 L G 0.0000
17 V G 0.0000
18 R G -3.3546
19 S G 0.0000
20 S G 0.0000
21 N G -2.6328
22 N G -2.0302
23 L G -0.8955
24 G G -0.7289
25 P G 0.0000
26 V G 0.7502
27 L G 0.0000
28 P G -0.0597
29 P G -0.5963
30 T G -1.0231
31 N G -1.7362
32 V G -0.8975
33 G G -1.2547
34 S G -1.1530
35 N G -1.1983
36 T G -0.3507
37 Y G 0.6816
1 K H -1.5192
2 C H -0.4790
3 N H -0.7469
4 T H -0.3612
5 A H 0.0000
6 T H 0.0000
7 C H -0.4181
8 A H 0.0000
9 T H 0.0000
10 Q H -0.9305
11 R H -1.6137
12 L H 0.0000
13 A H 0.0000
14 N H -2.2152
15 F H 0.0000
16 L H 0.0000
17 V H -2.3715
18 R H -3.0521
19 S H 0.0000
20 S H 0.0000
21 N H -2.4567
22 N H -1.9386
23 L H 0.0000
24 G H 0.0000
25 P H 0.0000
26 V H 0.7994
27 L H 0.0000
28 P H 0.1867
29 P H -0.5329
30 T H -0.9066
31 N H -1.5600
32 V H -0.8227
33 G H -1.3663
34 S H -1.1486
35 N H -1.2124
36 T H -0.1011
37 Y H 0.8095
1 K I -1.8393
2 C I -1.0559
3 N I -1.4354
4 T I -0.5505
5 A I -0.1909
6 T I 0.0000
7 C I -0.7668
8 A I -0.5146
9 T I -0.5393
10 Q I -0.8662
11 R I -1.3976
12 L I 0.0000
13 A I 0.0000
14 N I -1.7171
15 F I 0.0000
16 L I 0.0000
17 V I 0.0000
18 R I -2.8773
19 S I 0.0000
20 S I 0.0000
21 N I -2.1528
22 N I -1.9289
23 L I 0.0000
24 G I 0.0000
25 P I 0.0000
26 V I 0.7499
27 L I 0.0000
28 P I 0.0000
29 P I -0.6045
30 T I -0.8213
31 N I -1.1910
32 V I -0.1771
33 G I -0.9359
34 S I -0.8861
35 N I -1.0521
36 T I -0.1642
37 Y I 0.8677
1 K J -1.8879
2 C J -1.1705
3 N J -1.6347
4 T J -0.7387
5 A J -0.0870
6 T J -0.7067
7 C J -0.8420
8 A J 0.0000
9 T J -0.7406
10 Q J -1.1843
11 R J -1.9717
12 L J 0.0000
13 A J 0.0000
14 N J -2.5216
15 F J 0.0000
16 L J 0.0000
17 V J -2.6021
18 R J -3.4624
19 S J 0.0000
20 S J 0.0000
21 N J -2.7547
22 N J -2.4091
23 L J 0.0000
24 G J 0.0000
25 P J 0.0000
26 V J 0.6876
27 L J 0.0000
28 P J 0.0000
29 P J -0.6216
30 T J -0.8575
31 N J -0.6987
32 V J 0.7611
33 G J -0.3531
34 S J -0.6480
35 N J -0.9868
36 T J -0.1295
37 Y J 0.8677
1 K K -1.6770
2 C K -0.8556
3 N K -1.5110
4 T K -0.4414
5 A K 0.0899
6 T K 0.0000
7 C K -0.7738
8 A K -0.7181
9 T K -0.6902
10 Q K -1.1328
11 R K -1.7395
12 L K 0.0000
13 A K 0.0000
14 N K -2.1095
15 F K 0.0000
16 L K 0.0000
17 V K 0.0000
18 R K -3.5069
19 S K 0.0000
20 S K 0.0000
21 N K -2.8651
22 N K -2.4486
23 L K 0.0000
24 G K 0.0000
25 P K 0.0000
26 V K 0.6334
27 L K 0.0000
28 P K -0.1656
29 P K -0.6686
30 T K -0.7673
31 N K -0.6506
32 V K 0.8138
33 G K -0.2687
34 S K -0.6495
35 N K -0.9916
36 T K -0.0123
37 Y K 0.8710
1 K L -1.8715
2 C L -1.1625
3 N L -1.5682
4 T L -0.4418
5 A L -0.1771
6 T L 0.0000
7 C L -0.8556
8 A L 0.0000
9 T L -0.6921
10 Q L -1.0882
11 R L -1.6226
12 L L 0.0000
13 A L 0.0000
14 N L -2.0986
15 F L 0.0000
16 L L 0.0000
17 V L -2.6010
18 R L -3.2667
19 S L 0.0000
20 S L 0.0000
21 N L -2.5203
22 N L -2.3520
23 L L 0.0000
24 G L -0.4911
25 P L 0.0000
26 V L 0.6186
27 L L 0.0000
28 P L -0.0686
29 P L -0.5121
30 T L -0.8270
31 N L -0.7453
32 V L 0.6717
33 G L -0.3658
34 S L -0.6042
35 N L -0.9751
36 T L -0.0343
37 Y L 0.8665
1 K M -1.5226
2 C M -0.4731
3 N M -0.6065
4 T M -0.1143
5 A M -0.0948
6 T M 0.0000
7 C M -0.3788
8 A M 0.0000
9 T M -0.4336
10 Q M -0.8797
11 R M -1.5834
12 L M 0.0000
13 A M 0.0000
14 N M -1.7062
15 F M 0.0000
16 L M 0.0000
17 V M -2.1888
18 R M -3.1034
19 S M 0.0000
20 S M 0.0000
21 N M -2.7310
22 N M -2.5004
23 L M 0.0000
24 G M 0.0000
25 P M 0.0000
26 V M 0.5848
27 L M 0.0000
28 P M 0.0787
29 P M -0.4817
30 T M -0.9151
31 N M -1.0415
32 V M -0.0287
33 G M -0.6882
34 S M -0.7947
35 N M -1.0270
36 T M -0.3015
37 Y M 0.7547
1 K N -1.4471
2 C N -0.3488
3 N N -0.5051
4 T N -0.1615
5 A N -0.3035
6 T N 0.0000
7 C N -0.2813
8 A N 0.0000
9 T N 0.0000
10 Q N -0.7745
11 R N -1.5638
12 L N 0.0000
13 A N 0.0000
14 N N -1.5088
15 F N 0.0000
16 L N 0.0000
17 V N -1.9239
18 R N -2.5736
19 S N 0.0000
20 S N 0.0000
21 N N -2.7583
22 N N -2.3658
23 L N 0.0000
24 G N -0.6291
25 P N 0.0000
26 V N 0.5772
27 L N 0.0000
28 P N 0.0304
29 P N -0.5492
30 T N -1.0124
31 N N -1.5448
32 V N -0.6176
33 G N -1.1263
34 S N -0.9991
35 N N -1.1580
36 T N -0.2491
37 Y N 0.7989
1 K O -1.2287
2 C O -0.1292
3 N O -0.3550
4 T O -0.6802
5 A O 0.0000
6 T O 0.0000
7 C O -0.3449
8 A O 0.0000
9 T O 0.0000
10 Q O -0.8723
11 R O -1.5816
12 L O 0.0000
13 A O 0.0000
14 N O -1.9043
15 F O 0.0000
16 L O 0.0000
17 V O -1.8063
18 R O -3.0720
19 S O 0.0000
20 S O 0.0000
21 N O -2.7419
22 N O -2.9307
23 L O 0.0000
24 G O 0.0000
25 P O 0.0000
26 V O 0.6435
27 L O 0.0000
28 P O 0.0851
29 P O -0.5286
30 T O -0.6947
31 N O -1.4014
32 V O -0.6320
33 G O -1.2323
34 S O -1.0752
35 N O -1.1614
36 T O -0.1564
37 Y O 0.6993
1 K P -1.4812
2 C P -0.5670
3 N P -0.6900
4 T P -0.7139
5 A P -0.5074
6 T P -0.5792
7 C P -0.5759
8 A P -0.5102
9 T P -0.5140
10 Q P -0.9957
11 R P -1.5502
12 L P -0.8993
13 A P 0.0000
14 N P -1.8491
15 F P 0.0000
16 L P 0.0000
17 V P 0.0000
18 R P -3.3142
19 S P 0.0000
20 S P 0.0000
21 N P -2.8835
22 N P -2.6209
23 L P 0.0000
24 G P -0.6111
25 P P 0.0000
26 V P 0.6921
27 L P 0.0000
28 P P -0.0276
29 P P -0.3853
30 T P -0.9323
31 N P -1.5440
32 V P -0.7940
33 G P -1.1536
34 S P -0.9466
35 N P -1.1747
36 T P -0.2356
37 Y P 0.6523
1 K Q -1.1723
2 C Q -0.0574
3 N Q -0.3843
4 T Q -0.5801
5 A Q 0.0000
6 T Q -0.5012
7 C Q -0.3725
8 A Q 0.0000
9 T Q -0.6681
10 Q Q -0.8947
11 R Q -1.6753
12 L Q 0.0000
13 A Q 0.0000
14 N Q -1.7547
15 F Q 0.0000
16 L Q 0.0000
17 V Q -2.0634
18 R Q -2.8341
19 S Q 0.0000
20 S Q 0.0000
21 N Q -3.1488
22 N Q -2.9396
23 L Q -1.6125
24 G Q -0.9139
25 P Q 0.0000
26 V Q 0.5805
27 L Q 0.0000
28 P Q 0.0182
29 P Q -0.4819
30 T Q -0.8399
31 N Q -1.6828
32 V Q -0.8758
33 G Q -1.2607
34 S Q -0.8647
35 N Q -1.2009
36 T Q -0.3820
37 Y Q 0.6582
1 K R -1.3094
2 C R -0.3050
3 N R -0.5324
4 T R -0.9436
5 A R 0.0000
6 T R -0.4551
7 C R -0.8206
8 A R 0.0000
9 T R -0.7074
10 Q R -1.3471
11 R R -2.0858
12 L R 0.0000
13 A R 0.0000
14 N R -2.1476
15 F R 0.0000
16 L R 0.0000
17 V R -2.1440
18 R R -2.9201
19 S R 0.0000
20 S R 0.0000
21 N R -2.9834
22 N R -2.7761
23 L R 0.0000
24 G R 0.0000
25 P R 0.0000
26 V R 0.0000
27 L R 0.0000
28 P R 0.0597
29 P R 0.0000
30 T R -0.4324
31 N R -1.0699
32 V R -0.6574
33 G R -1.1818
34 S R -1.0968
35 N R -1.1909
36 T R -0.3658
37 Y R 0.6458
1 K S -1.5292
2 C S -0.6384
3 N S -0.9285
4 T S -0.4143
5 A S -0.4830
6 T S -0.7717
7 C S -0.7098
8 A S -0.5574
9 T S 0.0000
10 Q S -0.9535
11 R S -1.7095
12 L S -0.3855
13 A S 0.0000
14 N S -1.3348
15 F S -0.3527
16 L S 0.0000
17 V S 0.0000
18 R S -2.4217
19 S S -1.3347
20 S S 0.0000
21 N S -2.4730
22 N S -2.6300
23 L S 0.0000
24 G S 0.0000
25 P S 0.0000
26 V S 0.2587
27 L S 0.2683
28 P S -0.1870
29 P S 0.0000
30 T S -0.7852
31 N S -1.5877
32 V S -0.8138
33 G S -1.2242
34 S S -1.0399
35 N S -1.2005
36 T S -0.4267
37 Y S 0.6287
1 K T -1.4722
2 C T -0.7331
3 N T -1.0782
4 T T -0.6593
5 A T -0.4447
6 T T -0.7996
7 C T -0.9986
8 A T -0.6342
9 T T -0.6374
10 Q T -1.2892
11 R T -1.8243
12 L T -0.2362
13 A T 0.0000
14 N T -1.5819
15 F T 0.0501
16 L T 0.2484
17 V T -0.9034
18 R T -2.0129
19 S T -0.8568
20 S T -0.8856
21 N T -2.0107
22 N T -2.3865
23 L T -0.8724
24 G T -0.7493
25 P T -0.4132
26 V T 1.3747
27 L T 0.0000
28 P T -0.7072
29 P T 0.0000
30 T T -0.8085
31 N T -0.6918
32 V T 0.5841
33 G T -0.4673
34 S T -0.4554
35 N T -0.8740
36 T T -0.1643
37 Y T 0.8338
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Laboratory of Theory of Biopolymers 2018