| Chain sequence(s) |
A: HHQKLVFFAEDVGSNKGAIIGLMVGGVV
C: HHQKLVFFAEDVGSNKGAIIGLMVGGVV B: HHQKLVFFAEDVGSNKGAIIGLMVGGVV E: HHQKLVFFAEDVGSNKGAIIGLMVGGVV D: HHQKLVFFAEDVGSNKGAIIGLMVGGVV G: HHQKLVFFAEDVGSNKGAIIGLMVGGVV F: HHQKLVFFAEDVGSNKGAIIGLMVGGVV I: HHQKLVFFAEDVGSNKGAIIGLMVGGVV H: HHQKLVFFAEDVGSNKGAIIGLMVGGVV K: HHQKLVFFAEDVGSNKGAIIGLMVGGVV J: HHQKLVFFAEDVGSNKGAIIGLMVGGVV L: HHQKLVFFAEDVGSNKGAIIGLMVGGVV input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:36)
[INFO] Main: Simulation completed successfully. (00:07:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 13 | H | A | -2.1964 | |
| 14 | H | A | -2.7856 | |
| 15 | Q | A | -2.4578 | |
| 16 | K | A | -2.0728 | |
| 17 | L | A | 0.1706 | |
| 18 | V | A | 1.6756 | |
| 19 | F | A | 2.4084 | |
| 20 | F | A | 2.2369 | |
| 21 | A | A | -0.1226 | |
| 22 | E | A | -2.4212 | |
| 23 | D | A | -2.8637 | |
| 24 | V | A | -1.0639 | |
| 25 | G | A | -1.0278 | |
| 26 | S | A | -1.5058 | |
| 27 | N | A | -1.4869 | |
| 28 | K | A | -2.5102 | |
| 29 | G | A | -1.2706 | |
| 30 | A | A | 0.1113 | |
| 31 | I | A | 1.1341 | |
| 32 | I | A | 1.8419 | |
| 33 | G | A | 0.4430 | |
| 34 | L | A | 1.4082 | |
| 35 | M | A | 1.9701 | |
| 36 | V | A | 1.5848 | |
| 37 | G | A | 0.9095 | |
| 38 | G | A | 1.1447 | |
| 39 | V | A | 3.0577 | |
| 40 | V | A | 2.9785 | |
| 13 | H | B | -2.3493 | |
| 14 | H | B | -3.0692 | |
| 15 | Q | B | -2.9526 | |
| 16 | K | B | -2.3369 | |
| 17 | L | B | -0.1628 | |
| 18 | V | B | 1.5356 | |
| 19 | F | B | 2.0827 | |
| 20 | F | B | 1.5602 | |
| 21 | A | B | -0.4891 | |
| 22 | E | B | -2.7181 | |
| 23 | D | B | -3.1132 | |
| 24 | V | B | 0.0000 | |
| 25 | G | B | -0.7676 | |
| 26 | S | B | -1.5513 | |
| 27 | N | B | -1.6180 | |
| 28 | K | B | -2.5481 | |
| 29 | G | B | -1.4019 | |
| 30 | A | B | -0.3645 | |
| 31 | I | B | 0.3540 | |
| 32 | I | B | 1.1235 | |
| 33 | G | B | 0.2783 | |
| 34 | L | B | 0.0000 | |
| 35 | M | B | 1.4743 | |
| 36 | V | B | 0.8037 | |
| 37 | G | B | 0.5469 | |
| 38 | G | B | 0.9869 | |
| 39 | V | B | 3.0323 | |
| 40 | V | B | 2.9875 | |
| 13 | H | C | -2.5544 | |
| 14 | H | C | -2.7060 | |
| 15 | Q | C | -2.2835 | |
| 16 | K | C | -1.5349 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 1.1062 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | 1.4236 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | -1.7150 | |
| 23 | D | C | -1.9081 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | -0.5127 | |
| 26 | S | C | 0.0000 | |
| 27 | N | C | 0.0000 | |
| 28 | K | C | -1.9005 | |
| 29 | G | C | -1.3179 | |
| 30 | A | C | -0.1998 | |
| 31 | I | C | 0.0000 | |
| 32 | I | C | 0.9957 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 0.0000 | |
| 35 | M | C | 1.2946 | |
| 36 | V | C | 0.9465 | |
| 37 | G | C | 0.8363 | |
| 38 | G | C | 1.4937 | |
| 39 | V | C | 3.0197 | |
| 40 | V | C | 2.6799 | |
| 13 | H | D | -2.7339 | |
| 14 | H | D | -3.0537 | |
| 15 | Q | D | -2.5837 | |
| 16 | K | D | -1.7150 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.8473 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.9280 | |
| 21 | A | D | 0.0000 | |
| 22 | E | D | -1.9641 | |
| 23 | D | D | -2.0140 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | -0.5979 | |
| 26 | S | D | 0.0000 | |
| 27 | N | D | 0.0000 | |
| 28 | K | D | -1.9104 | |
| 29 | G | D | -1.4125 | |
| 30 | A | D | -0.4280 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.6879 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 0.0000 | |
| 35 | M | D | 1.0139 | |
| 36 | V | D | 0.5895 | |
| 37 | G | D | 0.6536 | |
| 38 | G | D | 1.3650 | |
| 39 | V | D | 2.9820 | |
| 40 | V | D | 2.5643 | |
| 13 | H | E | -2.4952 | |
| 14 | H | E | -2.2468 | |
| 15 | Q | E | -1.8473 | |
| 16 | K | E | -1.1969 | |
| 17 | L | E | 0.0000 | |
| 18 | V | E | 0.6775 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.7708 | |
| 21 | A | E | 0.0000 | |
| 22 | E | E | -1.2930 | |
| 23 | D | E | 0.0000 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | -0.2625 | |
| 26 | S | E | 0.0000 | |
| 27 | N | E | 0.0000 | |
| 28 | K | E | -1.5685 | |
| 29 | G | E | -1.1741 | |
| 30 | A | E | -0.2926 | |
| 31 | I | E | 0.0000 | |
| 32 | I | E | 0.5843 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 0.0000 | |
| 35 | M | E | 0.7494 | |
| 36 | V | E | 0.5810 | |
| 37 | G | E | 0.5225 | |
| 38 | G | E | 1.2310 | |
| 39 | V | E | 2.7045 | |
| 40 | V | E | 2.3501 | |
| 13 | H | F | -2.5728 | |
| 14 | H | F | -2.3463 | |
| 15 | Q | F | -1.9740 | |
| 16 | K | F | -1.2927 | |
| 17 | L | F | 0.0000 | |
| 18 | V | F | 0.5363 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.6544 | |
| 21 | A | F | 0.0000 | |
| 22 | E | F | -1.1802 | |
| 23 | D | F | -1.3180 | |
| 24 | V | F | 0.0000 | |
| 25 | G | F | -0.2739 | |
| 26 | S | F | 0.0000 | |
| 27 | N | F | 0.0000 | |
| 28 | K | F | -1.5954 | |
| 29 | G | F | -1.1794 | |
| 30 | A | F | -0.2963 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.5134 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.0000 | |
| 35 | M | F | 0.7671 | |
| 36 | V | F | 0.5080 | |
| 37 | G | F | 0.5223 | |
| 38 | G | F | 1.2032 | |
| 39 | V | F | 2.6622 | |
| 40 | V | F | 2.3053 | |
| 13 | H | G | -2.4245 | |
| 14 | H | G | -2.2316 | |
| 15 | Q | G | -1.7382 | |
| 16 | K | G | -1.1433 | |
| 17 | L | G | 0.0000 | |
| 18 | V | G | 0.7451 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 0.7943 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | -1.1372 | |
| 23 | D | G | 0.0000 | |
| 24 | V | G | 0.0000 | |
| 25 | G | G | -0.2168 | |
| 26 | S | G | 0.0000 | |
| 27 | N | G | 0.0000 | |
| 28 | K | G | -1.6136 | |
| 29 | G | G | -0.9953 | |
| 30 | A | G | -0.2878 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.5916 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.0000 | |
| 35 | M | G | 0.7522 | |
| 36 | V | G | 0.4856 | |
| 37 | G | G | 0.5330 | |
| 38 | G | G | 1.1565 | |
| 39 | V | G | 2.7492 | |
| 40 | V | G | 2.2196 | |
| 13 | H | H | -2.4587 | |
| 14 | H | H | -2.2989 | |
| 15 | Q | H | -1.8186 | |
| 16 | K | H | -1.2631 | |
| 17 | L | H | 0.0000 | |
| 18 | V | H | 0.5715 | |
| 19 | F | H | 0.0000 | |
| 20 | F | H | 0.6438 | |
| 21 | A | H | 0.0000 | |
| 22 | E | H | -1.3119 | |
| 23 | D | H | 0.0000 | |
| 24 | V | H | 0.0000 | |
| 25 | G | H | -0.2509 | |
| 26 | S | H | 0.0000 | |
| 27 | N | H | 0.0000 | |
| 28 | K | H | -1.6177 | |
| 29 | G | H | -0.9986 | |
| 30 | A | H | -0.2424 | |
| 31 | I | H | 0.0000 | |
| 32 | I | H | 0.6477 | |
| 33 | G | H | 0.0000 | |
| 34 | L | H | 0.0000 | |
| 35 | M | H | 0.7950 | |
| 36 | V | H | 0.5356 | |
| 37 | G | H | 0.5761 | |
| 38 | G | H | 1.1496 | |
| 39 | V | H | 2.7381 | |
| 40 | V | H | 2.2172 | |
| 13 | H | I | -2.5760 | |
| 14 | H | I | -2.5593 | |
| 15 | Q | I | -2.1747 | |
| 16 | K | I | -1.3755 | |
| 17 | L | I | 0.0000 | |
| 18 | V | I | 0.9350 | |
| 19 | F | I | 0.0000 | |
| 20 | F | I | 1.1161 | |
| 21 | A | I | 0.0000 | |
| 22 | E | I | -0.9998 | |
| 23 | D | I | 0.0000 | |
| 24 | V | I | 0.0000 | |
| 25 | G | I | -0.1914 | |
| 26 | S | I | 0.0000 | |
| 27 | N | I | 0.0000 | |
| 28 | K | I | -2.1470 | |
| 29 | G | I | -1.3359 | |
| 30 | A | I | -0.3430 | |
| 31 | I | I | 0.0000 | |
| 32 | I | I | 1.0372 | |
| 33 | G | I | 0.0000 | |
| 34 | L | I | 0.0000 | |
| 35 | M | I | 0.8779 | |
| 36 | V | I | 0.5686 | |
| 37 | G | I | 0.7553 | |
| 38 | G | I | 1.4369 | |
| 39 | V | I | 2.9060 | |
| 40 | V | I | 2.6039 | |
| 13 | H | J | -2.6270 | |
| 14 | H | J | -2.6693 | |
| 15 | Q | J | -2.3133 | |
| 16 | K | J | -1.4966 | |
| 17 | L | J | 0.0000 | |
| 18 | V | J | 1.1972 | |
| 19 | F | J | 0.0000 | |
| 20 | F | J | 1.2448 | |
| 21 | A | J | 0.0000 | |
| 22 | E | J | -1.1587 | |
| 23 | D | J | 0.0000 | |
| 24 | V | J | 0.0000 | |
| 25 | G | J | -0.1413 | |
| 26 | S | J | 0.0000 | |
| 27 | N | J | 0.0000 | |
| 28 | K | J | -2.1445 | |
| 29 | G | J | -1.2731 | |
| 30 | A | J | -0.2100 | |
| 31 | I | J | 0.0000 | |
| 32 | I | J | 1.1625 | |
| 33 | G | J | 0.0000 | |
| 34 | L | J | 0.0000 | |
| 35 | M | J | 1.1640 | |
| 36 | V | J | 0.8750 | |
| 37 | G | J | 0.8927 | |
| 38 | G | J | 1.5006 | |
| 39 | V | J | 2.9296 | |
| 40 | V | J | 2.6270 | |
| 13 | H | K | -2.2991 | |
| 14 | H | K | -2.5947 | |
| 15 | Q | K | -2.4296 | |
| 16 | K | K | -1.5958 | |
| 17 | L | K | 0.2124 | |
| 18 | V | K | 1.1643 | |
| 19 | F | K | 1.9434 | |
| 20 | F | K | 1.2751 | |
| 21 | A | K | -0.1041 | |
| 22 | E | K | -1.7156 | |
| 23 | D | K | -1.4975 | |
| 24 | V | K | -0.1129 | |
| 25 | G | K | -0.4608 | |
| 26 | S | K | -1.2246 | |
| 27 | N | K | -2.0492 | |
| 28 | K | K | -2.6281 | |
| 29 | G | K | -1.6587 | |
| 30 | A | K | -0.3579 | |
| 31 | I | K | 0.6284 | |
| 32 | I | K | 1.5791 | |
| 33 | G | K | 0.0000 | |
| 34 | L | K | 1.3668 | |
| 35 | M | K | 1.2875 | |
| 36 | V | K | 0.9618 | |
| 37 | G | K | 0.4934 | |
| 38 | G | K | 1.1861 | |
| 39 | V | K | 2.9305 | |
| 40 | V | K | 3.1227 | |
| 13 | H | L | -2.3764 | |
| 14 | H | L | -2.7828 | |
| 15 | Q | L | -2.7937 | |
| 16 | K | L | -1.7738 | |
| 17 | L | L | 0.3449 | |
| 18 | V | L | 1.7408 | |
| 19 | F | L | 2.8709 | |
| 20 | F | L | 1.6810 | |
| 21 | A | L | 0.1457 | |
| 22 | E | L | -1.7145 | |
| 23 | D | L | -1.3337 | |
| 24 | V | L | 0.2264 | |
| 25 | G | L | -0.4952 | |
| 26 | S | L | -1.2479 | |
| 27 | N | L | -1.9131 | |
| 28 | K | L | -2.6053 | |
| 29 | G | L | -1.5667 | |
| 30 | A | L | -0.1130 | |
| 31 | I | L | 0.9509 | |
| 32 | I | L | 1.7298 | |
| 33 | G | L | 0.8422 | |
| 34 | L | L | 1.6054 | |
| 35 | M | L | 1.5837 | |
| 36 | V | L | 1.3643 | |
| 37 | G | L | 0.7057 | |
| 38 | G | L | 1.2756 | |
| 39 | V | L | 2.9399 | |
| 40 | V | L | 3.1737 |