| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVKDGKIVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPVHGGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPEGHPLPDEPPPSPLYVRPPPSSPFAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQISTPENNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9469 | |
| 2 | L | A | 1.9707 | |
| 3 | P | A | 0.6562 | |
| 4 | P | A | 0.3529 | |
| 5 | T | A | 0.1141 | |
| 6 | T | A | 0.1378 | |
| 7 | P | A | 0.1629 | |
| 8 | V | A | 1.2338 | |
| 9 | A | A | 0.0817 | |
| 10 | K | A | -1.0253 | |
| 11 | V | A | -0.1696 | |
| 12 | Q | A | -1.4186 | |
| 13 | S | A | -1.5669 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4515 | |
| 16 | E | A | -2.4547 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4516 | |
| 20 | P | A | 0.1231 | |
| 21 | T | A | 0.1579 | |
| 22 | S | A | -0.0979 | |
| 23 | L | A | 0.0868 | |
| 24 | F | A | -0.0324 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2932 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8939 | |
| 31 | R | A | -2.6816 | |
| 32 | L | A | -0.7987 | |
| 33 | L | A | 1.1566 | |
| 34 | T | A | 1.3633 | |
| 35 | V | A | 1.8148 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1591 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6030 | |
| 40 | E | A | -1.5721 | |
| 41 | D | A | -0.6242 | |
| 42 | I | A | 1.0542 | |
| 43 | V | A | 1.0963 | |
| 44 | K | A | -1.2991 | |
| 45 | D | A | -2.3910 | |
| 46 | G | A | -1.4063 | |
| 47 | K | A | -0.9366 | |
| 48 | I | A | 1.7307 | |
| 49 | V | A | 2.1582 | |
| 50 | V | A | 1.3971 | |
| 51 | P | A | 0.5926 | |
| 52 | K | A | -0.5549 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1796 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4085 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2718 | |
| 70 | K | A | -1.7943 | |
| 71 | F | A | -0.6460 | |
| 72 | A | A | -0.5805 | |
| 73 | L | A | -0.8657 | |
| 74 | P | A | -1.2683 | |
| 75 | Q | A | -2.5011 | |
| 76 | K | A | -3.1055 | |
| 77 | D | A | -2.9894 | |
| 78 | F | A | -1.6665 | |
| 79 | Y | A | -1.8911 | |
| 80 | D | A | -2.6859 | |
| 81 | P | A | -2.3001 | |
| 82 | E | A | -3.0447 | |
| 83 | K | A | -3.3931 | |
| 84 | E | A | -2.4595 | |
| 85 | R | A | -1.2908 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6516 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9765 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3653 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6956 | |
| 99 | G | A | -0.5368 | |
| 100 | P | A | -0.3967 | |
| 101 | L | A | 0.0602 | |
| 102 | G | A | -0.1746 | |
| 103 | K | A | -0.5740 | |
| 104 | G | A | -0.4685 | |
| 105 | S | A | -0.5272 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1185 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4161 | |
| 110 | L | A | 0.3116 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1672 | |
| 113 | K | A | -0.5237 | |
| 114 | L | A | -1.0922 | |
| 115 | G | A | -1.0079 | |
| 116 | D | A | -1.4443 | |
| 117 | T | A | -1.0498 | |
| 118 | E | A | -1.7838 | |
| 119 | N | A | -2.1929 | |
| 120 | P | A | -1.9309 | |
| 121 | T | A | -1.5740 | |
| 122 | E | A | -2.3120 | |
| 123 | P | A | -0.9035 | |
| 124 | V | A | -0.7904 | |
| 125 | H | A | -1.1002 | |
| 126 | G | A | -1.6475 | |
| 127 | G | A | -1.6579 | |
| 128 | A | A | -1.3596 | |
| 129 | D | A | -2.3136 | |
| 130 | D | A | -1.8613 | |
| 131 | R | A | -1.1060 | |
| 132 | V | A | 0.2587 | |
| 133 | A | A | 0.4436 | |
| 134 | F | A | 0.2737 | |
| 135 | S | A | -0.1004 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5459 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5599 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2049 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1412 | |
| 157 | D | A | 0.3027 | |
| 158 | L | A | 0.7780 | |
| 159 | A | A | 0.1634 | |
| 160 | E | A | -1.4584 | |
| 161 | P | A | -0.2191 | |
| 162 | C | A | 0.1858 | |
| 163 | P | A | -0.1763 | |
| 164 | G | A | -0.0909 | |
| 165 | L | A | 0.5638 | |
| 166 | P | A | -0.1325 | |
| 167 | P | A | -0.3484 | |
| 168 | G | A | -0.4588 | |
| 169 | A | A | -0.0421 | |
| 170 | C | A | 0.6455 | |
| 171 | P | A | 0.5135 | |
| 172 | P | A | 0.8351 | |
| 173 | I | A | 1.9878 | |
| 174 | Q | A | 0.8438 | |
| 175 | L | A | 1.4830 | |
| 176 | V | A | 0.8558 | |
| 177 | N | A | -0.2974 | |
| 178 | S | A | 0.0265 | |
| 179 | V | A | 0.4275 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3804 | |
| 182 | D | A | 0.0766 | |
| 183 | G | A | -0.1560 | |
| 184 | D | A | -0.5412 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1141 | |
| 190 | F | A | 0.0606 | |
| 191 | G | A | -0.1044 | |
| 192 | N | A | -0.2668 | |
| 193 | M | A | -0.1355 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4336 | |
| 197 | E | A | -2.6737 | |
| 198 | L | A | -1.2582 | |
| 199 | Q | A | -2.5694 | |
| 200 | Q | A | -3.3138 | |
| 201 | D | A | -3.5471 | |
| 202 | R | A | -3.3231 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1832 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3637 | |
| 211 | S | A | -1.9259 | |
| 212 | T | A | -1.4616 | |
| 213 | R | A | -2.1224 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1649 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3777 | |
| 220 | L | A | 0.6113 | |
| 221 | K | A | -1.1029 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8123 | |
| 224 | N | A | -1.4917 | |
| 225 | E | A | -1.2347 | |
| 226 | A | A | -0.6051 | |
| 227 | Y | A | -0.3618 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6743 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0790 | |
| 234 | F | A | 0.2695 | |
| 235 | G | A | -0.7997 | |
| 236 | R | A | -2.5690 | |
| 237 | R | A | -2.7991 | |
| 238 | E | A | -2.0798 | |
| 239 | Q | A | -0.1641 | |
| 240 | V | A | 1.4073 | |
| 241 | Y | A | 1.1222 | |
| 242 | A | A | 0.1736 | |
| 243 | R | A | -1.0802 | |
| 244 | H | A | -0.9868 | |
| 245 | F | A | 0.0619 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8719 | |
| 249 | S | A | -1.3823 | |
| 250 | G | A | -1.2940 | |
| 251 | P | A | -1.1857 | |
| 252 | E | A | -1.4316 | |
| 253 | G | A | -1.3076 | |
| 254 | H | A | -1.4464 | |
| 255 | P | A | -1.3126 | |
| 256 | L | A | -0.4354 | |
| 257 | P | A | -1.1107 | |
| 258 | D | A | -2.3218 | |
| 259 | E | A | -1.8480 | |
| 260 | P | A | -1.3498 | |
| 261 | P | A | -0.7397 | |
| 262 | P | A | -0.2831 | |
| 263 | S | A | -0.2474 | |
| 264 | P | A | 0.5410 | |
| 265 | L | A | 1.4395 | |
| 266 | Y | A | 1.1248 | |
| 267 | V | A | 1.2494 | |
| 268 | R | A | -0.5555 | |
| 269 | P | A | 0.1049 | |
| 270 | P | A | -0.3593 | |
| 271 | P | A | -0.2058 | |
| 272 | S | A | -0.0609 | |
| 273 | S | A | 0.2848 | |
| 274 | P | A | 0.3919 | |
| 275 | F | A | 1.5571 | |
| 276 | A | A | 1.0287 | |
| 277 | V | A | 1.8235 | |
| 278 | R | A | 0.5649 | |
| 279 | P | A | -0.0646 | |
| 280 | P | A | -0.5273 | |
| 281 | T | A | -0.5186 | |
| 282 | D | A | -1.0121 | |
| 283 | Y | A | 0.7962 | |
| 284 | F | A | 0.6889 | |
| 285 | G | A | 0.2419 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9138 | |
| 291 | L | A | 1.6314 | |
| 292 | V | A | 0.6563 | |
| 293 | S | A | -0.1576 | |
| 294 | S | A | -0.9604 | |
| 295 | D | A | -1.8419 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0966 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6553 | |
| 301 | R | A | -1.8689 | |
| 302 | P | A | -0.9931 | |
| 303 | F | A | -0.1937 | |
| 304 | W | A | -0.5564 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0837 | |
| 307 | R | A | -2.8379 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2609 | |
| 310 | G | A | -1.2246 | |
| 311 | N | A | -1.2806 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7961 | |
| 319 | N | A | -0.8572 | |
| 320 | E | A | -1.0440 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3265 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0874 | |
| 333 | N | A | 0.5374 | |
| 334 | F | A | 1.7337 | |
| 335 | T | A | 0.9126 | |
| 336 | I | A | 0.4527 | |
| 337 | S | A | -0.9494 | |
| 338 | Q | A | -1.6695 | |
| 339 | Q | A | -1.1961 | |
| 340 | I | A | 0.8241 | |
| 341 | S | A | 0.0421 | |
| 342 | T | A | -0.5465 | |
| 343 | P | A | -1.0066 | |
| 344 | E | A | -2.3423 | |
| 345 | N | A | -2.0373 | |
| 346 | N | A | -1.3838 | |
| 347 | V | A | 0.6398 | |
| 348 | Y | A | 0.9556 | |
| 349 | D | A | -0.3938 | |
| 350 | P | A | -0.5107 | |
| 351 | S | A | -0.4749 | |
| 352 | N | A | -0.1959 | |
| 353 | F | A | -0.9068 | |
| 354 | K | A | -1.9862 | |
| 355 | N | A | -1.7905 | |
| 356 | Y | A | 0.0452 | |
| 357 | L | A | 0.7379 | |
| 358 | R | A | 0.9901 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3711 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0847 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0487 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6957 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3038 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3157 | |
| 376 | L | A | -1.7129 | |
| 377 | D | A | -1.9951 | |
| 378 | P | A | -1.0378 | |
| 379 | G | A | -1.0134 | |
| 380 | V | A | -0.9344 | |
| 381 | L | A | -0.5260 | |
| 382 | A | A | -0.6485 | |
| 383 | H | A | -0.8029 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3893 | |
| 386 | T | A | -0.5408 | |
| 387 | M | A | -0.2904 | |
| 388 | N | A | -0.8530 | |
| 389 | P | A | -1.2280 | |
| 390 | T | A | -1.4193 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4119 | |
| 393 | E | A | -2.7465 | |
| 394 | N | A | -2.4869 | |
| 395 | W | A | -1.3406 | |
| 396 | N | A | -1.0908 | |
| 397 | L | A | -0.2014 | |
| 398 | G | A | 0.5324 | |
| 399 | F | A | 2.4164 | |
| 400 | V | A | 1.8304 | |
| 401 | P | A | 0.0553 | |
| 402 | P | A | -1.7761 | |
| 403 | K | A | -3.3061 | |
| 404 | E | A | -3.8185 | |
| 405 | R | A | -3.8320 | |
| 406 | E | A | -3.7474 | |
| 407 | D | A | -2.8432 | |
| 408 | P | A | -1.7511 | |
| 409 | Y | A | -0.9823 | |
| 410 | K | A | -2.1088 | |
| 411 | G | A | -0.6355 | |
| 412 | L | A | 0.6727 | |
| 413 | I | A | 1.5825 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4067 | |
| 416 | E | A | -1.7266 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9631 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0553 | |
| 421 | E | A | -2.7722 | |
| 422 | R | A | -2.6104 | |
| 423 | F | A | -1.2729 | |
| 424 | S | A | -1.4725 | |
| 425 | Q | A | -1.8903 | |
| 426 | D | A | -2.9791 | |
| 427 | L | A | -2.1711 | |
| 428 | D | A | -3.0329 | |
| 429 | Q | A | -2.7637 | |
| 430 | F | A | -1.6241 | |
| 431 | A | A | -1.1426 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2739 | |
| 435 | K | A | -1.0927 | |
| 436 | F | A | -0.1054 | |
| 437 | L | A | 0.7836 | |
| 438 | Y | A | 0.6267 | |
| 439 | Q | A | -0.3868 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine