Project name: 4XXD

Status: done

Started: 2026-03-30 05:49:39
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYSMSWVRQAPGKGLELVAQINSVGSSTYYPDTVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCASGDYWGQGTLVTVSS
L: DVVMTQSPLSLPVTLGQPASISCRSSQSLIYSDGNAYLHWFLQKPGQSPRLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCSQSTHVPWTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-2.6212
Maximal score value
1.6597
Average score
-0.5341
Total score value
-119.6464

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9145
2 V H -0.9316
3 Q H -0.9901
4 L H 0.0000
5 V H -0.0492
6 E H 0.0000
7 S H -0.4822
8 G H -0.7317
9 G H 0.1571
11 G H 0.8469
12 L H 1.4461
13 V H -0.0033
14 Q H -1.2931
15 P H -1.3511
16 G H -1.4203
17 G H -1.1499
18 S H -1.0670
19 L H -0.8821
20 R H -1.8018
21 L H 0.0000
22 S H -0.5268
23 C H 0.0000
24 A H -0.4330
25 A H 0.0000
26 S H -0.9575
27 G H -1.0399
28 F H -0.5992
29 T H -0.5941
30 F H 0.0000
35 S H -0.9904
36 R H -1.4122
37 Y H -0.2649
38 S H -0.2383
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5517
45 A H -0.9611
46 P H -0.9796
47 G H -1.4697
48 K H -2.3353
49 G H -1.5041
50 L H -0.7401
51 E H -0.9163
52 L H 0.0000
53 V H 0.0000
54 A H 0.0000
55 Q H 0.0451
56 I H 0.0000
57 N H -0.2205
58 S H -0.0240
59 V H 1.0380
62 G H 0.1796
63 S H 0.0408
64 S H -0.1638
65 T H 0.0211
66 Y H 0.1269
67 Y H -0.7087
68 P H -1.6232
69 D H -2.4781
70 T H -1.6997
71 V H 0.0000
72 K H -2.5591
74 G H -1.7248
75 R H -1.5582
76 F H 0.0000
77 T H -0.7648
78 I H 0.0000
79 S H -0.4641
80 R H -0.6407
81 D H -1.1189
82 N H -1.3031
83 A H -1.2733
84 K H -2.2173
85 N H -1.6273
86 T H -1.0225
87 L H 0.0000
88 Y H -0.4460
89 L H 0.0000
90 Q H -1.0449
91 M H 0.0000
92 N H -1.2887
93 S H -1.1707
94 L H 0.0000
95 R H -2.0416
96 A H -1.5895
97 E H -2.1287
98 D H 0.0000
99 T H -0.2961
100 A H 0.0000
101 V H 0.9249
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 S H -0.0741
107 G H -0.4490
116 D H -0.7319
117 Y H -0.3743
118 W H -0.6321
119 G H 0.0000
120 Q H -1.1721
121 G H -0.1810
122 T H 0.4593
123 L H 1.6597
124 V H 0.0000
125 T H 0.3927
126 V H 0.0000
127 S H -0.6796
128 S H -0.5204
1 D L -1.2331
2 V L 0.0000
3 V L 0.6580
4 M L 0.0000
5 T L -0.4949
6 Q L 0.0000
7 S L -0.2375
8 P L 0.2129
9 L L 0.9749
10 S L 0.0699
11 L L -0.2004
12 P L -0.7119
13 V L 0.0000
14 T L -1.0242
15 L L -0.5310
16 G L -1.2419
17 Q L -1.7792
18 P L -1.7217
19 A L 0.0000
20 S L -0.7287
21 I L 0.0000
22 S L -0.8245
23 C L 0.0000
24 R L -2.2345
25 S L 0.0000
26 S L -0.9242
27 Q L -1.5202
28 S L -0.6706
29 L L 0.0000
30 I L 0.8597
31 Y L 0.6520
32 S L -0.5115
34 D L -1.6958
35 G L -0.8529
36 N L -0.5415
37 A L 0.1633
38 Y L 0.4753
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 F L 0.0000
43 L L 0.0000
44 Q L -1.0854
45 K L -1.5285
46 P L -0.8694
47 G L -1.2022
48 Q L -1.6770
49 S L 0.0000
50 P L 0.0000
51 R L -1.9668
52 L L 0.0000
53 L L -0.5218
54 I L 0.0000
55 Y L 0.0088
56 K L -0.4207
57 V L -0.3774
65 S L -0.6354
66 N L -0.8522
67 R L -1.1447
68 F L -0.4567
69 S L -0.4057
70 G L -0.7081
71 V L -0.7196
72 P L -1.1764
74 D L -2.1705
75 R L -2.0300
76 F L 0.0000
77 S L -1.2768
78 G L 0.0000
79 S L -0.7996
80 G L -1.0109
83 S L -0.7262
84 G L -0.5957
85 T L -1.3800
86 D L -1.9129
87 F L 0.0000
88 T L -0.9771
89 L L 0.0000
90 K L -1.6782
91 I L 0.0000
92 S L -2.1448
93 R L -2.6212
94 V L 0.0000
95 E L -1.5310
96 A L -1.0440
97 E L -1.8655
98 D L 0.0000
99 V L -0.6086
100 G L 0.0000
101 V L -0.2219
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 S L 0.0000
106 Q L 0.0000
107 S L 0.3133
108 T L 0.0000
109 H L 0.2910
114 V L 1.2301
115 P L 0.0000
116 W L 0.0000
117 T L 0.1512
118 F L 0.1148
119 G L 0.0000
120 Q L -0.9746
121 G L 0.0000
122 T L 0.0000
123 K L -0.6385
124 L L 0.0000
125 E L -0.9723
126 I L -0.5228
127 K L -1.4336
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Laboratory of Theory of Biopolymers 2018