| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYSMSWVRQAPGKGLELVAQINSVGSSTYYPDTVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCASGDYWGQGTLVTVSS
L: DVVMTQSPLSLPVTLGQPASISCRSSQSLIYSDGNAYLHWFLQKPGQSPRLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCSQSTHVPWTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9145 | |
| 2 | V | H | -0.9316 | |
| 3 | Q | H | -0.9901 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | -0.0492 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4822 | |
| 8 | G | H | -0.7317 | |
| 9 | G | H | 0.1571 | |
| 11 | G | H | 0.8469 | |
| 12 | L | H | 1.4461 | |
| 13 | V | H | -0.0033 | |
| 14 | Q | H | -1.2931 | |
| 15 | P | H | -1.3511 | |
| 16 | G | H | -1.4203 | |
| 17 | G | H | -1.1499 | |
| 18 | S | H | -1.0670 | |
| 19 | L | H | -0.8821 | |
| 20 | R | H | -1.8018 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.5268 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.4330 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9575 | |
| 27 | G | H | -1.0399 | |
| 28 | F | H | -0.5992 | |
| 29 | T | H | -0.5941 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.9904 | |
| 36 | R | H | -1.4122 | |
| 37 | Y | H | -0.2649 | |
| 38 | S | H | -0.2383 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5517 | |
| 45 | A | H | -0.9611 | |
| 46 | P | H | -0.9796 | |
| 47 | G | H | -1.4697 | |
| 48 | K | H | -2.3353 | |
| 49 | G | H | -1.5041 | |
| 50 | L | H | -0.7401 | |
| 51 | E | H | -0.9163 | |
| 52 | L | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | Q | H | 0.0451 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.2205 | |
| 58 | S | H | -0.0240 | |
| 59 | V | H | 1.0380 | |
| 62 | G | H | 0.1796 | |
| 63 | S | H | 0.0408 | |
| 64 | S | H | -0.1638 | |
| 65 | T | H | 0.0211 | |
| 66 | Y | H | 0.1269 | |
| 67 | Y | H | -0.7087 | |
| 68 | P | H | -1.6232 | |
| 69 | D | H | -2.4781 | |
| 70 | T | H | -1.6997 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5591 | |
| 74 | G | H | -1.7248 | |
| 75 | R | H | -1.5582 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7648 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4641 | |
| 80 | R | H | -0.6407 | |
| 81 | D | H | -1.1189 | |
| 82 | N | H | -1.3031 | |
| 83 | A | H | -1.2733 | |
| 84 | K | H | -2.2173 | |
| 85 | N | H | -1.6273 | |
| 86 | T | H | -1.0225 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4460 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0449 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2887 | |
| 93 | S | H | -1.1707 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.0416 | |
| 96 | A | H | -1.5895 | |
| 97 | E | H | -2.1287 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.2961 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.9249 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | S | H | -0.0741 | |
| 107 | G | H | -0.4490 | |
| 116 | D | H | -0.7319 | |
| 117 | Y | H | -0.3743 | |
| 118 | W | H | -0.6321 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1721 | |
| 121 | G | H | -0.1810 | |
| 122 | T | H | 0.4593 | |
| 123 | L | H | 1.6597 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3927 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6796 | |
| 128 | S | H | -0.5204 | |
| 1 | D | L | -1.2331 | |
| 2 | V | L | 0.0000 | |
| 3 | V | L | 0.6580 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.4949 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.2375 | |
| 8 | P | L | 0.2129 | |
| 9 | L | L | 0.9749 | |
| 10 | S | L | 0.0699 | |
| 11 | L | L | -0.2004 | |
| 12 | P | L | -0.7119 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.0242 | |
| 15 | L | L | -0.5310 | |
| 16 | G | L | -1.2419 | |
| 17 | Q | L | -1.7792 | |
| 18 | P | L | -1.7217 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.7287 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8245 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2345 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.9242 | |
| 27 | Q | L | -1.5202 | |
| 28 | S | L | -0.6706 | |
| 29 | L | L | 0.0000 | |
| 30 | I | L | 0.8597 | |
| 31 | Y | L | 0.6520 | |
| 32 | S | L | -0.5115 | |
| 34 | D | L | -1.6958 | |
| 35 | G | L | -0.8529 | |
| 36 | N | L | -0.5415 | |
| 37 | A | L | 0.1633 | |
| 38 | Y | L | 0.4753 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | -1.0854 | |
| 45 | K | L | -1.5285 | |
| 46 | P | L | -0.8694 | |
| 47 | G | L | -1.2022 | |
| 48 | Q | L | -1.6770 | |
| 49 | S | L | 0.0000 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.9668 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | -0.5218 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0088 | |
| 56 | K | L | -0.4207 | |
| 57 | V | L | -0.3774 | |
| 65 | S | L | -0.6354 | |
| 66 | N | L | -0.8522 | |
| 67 | R | L | -1.1447 | |
| 68 | F | L | -0.4567 | |
| 69 | S | L | -0.4057 | |
| 70 | G | L | -0.7081 | |
| 71 | V | L | -0.7196 | |
| 72 | P | L | -1.1764 | |
| 74 | D | L | -2.1705 | |
| 75 | R | L | -2.0300 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.2768 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.7996 | |
| 80 | G | L | -1.0109 | |
| 83 | S | L | -0.7262 | |
| 84 | G | L | -0.5957 | |
| 85 | T | L | -1.3800 | |
| 86 | D | L | -1.9129 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.9771 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.6782 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.1448 | |
| 93 | R | L | -2.6212 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.5310 | |
| 96 | A | L | -1.0440 | |
| 97 | E | L | -1.8655 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.6086 | |
| 100 | G | L | 0.0000 | |
| 101 | V | L | -0.2219 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.3133 | |
| 108 | T | L | 0.0000 | |
| 109 | H | L | 0.2910 | |
| 114 | V | L | 1.2301 | |
| 115 | P | L | 0.0000 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | 0.1512 | |
| 118 | F | L | 0.1148 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -0.9746 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6385 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9723 | |
| 126 | I | L | -0.5228 | |
| 127 | K | L | -1.4336 |