| Chain sequence(s) |
A: KWCFRVCYRMICYRRCR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.2678 | |
| 2 | W | A | 0.0539 | |
| 3 | C | A | -0.8675 | |
| 4 | F | A | -1.0454 | |
| 5 | R | A | -1.7856 | |
| 6 | V | A | -0.1103 | |
| 7 | C | A | 1.4459 | |
| 8 | Y | A | 1.7824 | |
| 9 | R | A | 0.0089 | |
| 10 | M | A | 1.5436 | |
| 11 | I | A | 2.6353 | |
| 12 | C | A | 1.5625 | |
| 13 | Y | A | 0.3145 | |
| 14 | R | A | -2.3069 | |
| 15 | R | A | -2.4741 | |
| 16 | C | A | -1.5216 | |
| 17 | R | A | -1.8573 |