Project name: ECD_946_AF2 [mutate: FK206A]

Status: done

Started: 2024-06-13 16:12:26
Settings
Chain sequence(s) A: NFTLPPNFGKRPTDLELSVKLVEMLENIMLRDGCTLEESKIKKVLEKPKYINLALEAQFTIMPKTALELAKVFRLKNIEALAILVCGCSPTGNLSNIYSRRLKGDLNLSWVMTTCSTLCANERMPELLEKYSRGIYDGDLKDKVPYKGILISLELVTKPCTEGIELKSKRPQLLRKVMKELEEKVKELEEEVTRLSKENVGKSIMFAMTPKILKTSSLMPKLGYEKGLEISEKACLNGRCRRTVSMETGCRNVQLCSTILNVAFPPEVIGPLFFFPLLYMQNQKEEGDKIVKEYKEEEKKKE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues FK206A
Energy difference between WT (input) and mutated protein (by FoldX) 0.199374 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:03:04)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:03:34)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:15)
Show buried residues

Minimal score value
-5.7761
Maximal score value
1.3287
Average score
-1.2691
Total score value
-383.2611

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.0792
2 F A -0.3072
3 T A 0.0739
4 L A -0.2923
5 P A -0.2938
6 P A -1.0258
7 N A -2.1468
8 F A -1.4887
9 G A 0.0000
10 K A -2.1916
11 R A -1.4144
12 P A -0.8353
13 T A -0.6396
14 D A 0.0000
15 L A 0.6089
16 E A -0.4066
17 L A 0.0000
18 S A 0.7907
19 V A 1.3287
20 K A -0.3529
21 L A 0.0000
22 V A -0.0685
23 E A -1.0742
24 M A 0.0000
25 L A 0.0000
26 E A -1.4576
27 N A 0.0000
28 I A 0.0000
29 M A 0.0000
30 L A -0.7901
31 R A -0.9112
32 D A 0.0000
33 G A 0.0000
34 C A 0.0000
35 T A -0.4083
36 L A 0.0000
37 E A -2.3010
38 E A -3.1812
39 S A -2.6308
40 K A -2.9933
41 I A -2.5846
42 K A -3.5771
43 K A -3.6652
44 V A -2.3602
45 L A -1.8219
46 E A -3.2281
47 K A -3.2760
48 P A -2.3694
49 K A -2.6365
50 Y A -1.6953
51 I A 0.0000
52 N A -2.2037
53 L A -1.2301
54 A A 0.0000
55 L A -0.9214
56 E A -1.8888
57 A A 0.0000
58 Q A 0.0000
59 F A 0.0000
60 T A -0.7968
61 I A -0.6271
62 M A 0.0000
63 P A 0.0000
64 K A -1.7333
65 T A 0.0000
66 A A 0.0000
67 L A -1.2241
68 E A -2.3494
69 L A 0.0000
70 A A 0.0000
71 K A -2.1904
72 V A 0.0034
73 F A -1.1268
74 R A -2.6047
75 L A -1.9693
76 K A -2.6350
77 N A -2.1248
78 I A -0.5424
79 E A 0.0000
80 A A 0.0000
81 L A 0.0000
82 A A 0.0000
83 I A 0.0000
84 L A 0.0000
85 V A 0.0000
86 C A 0.0000
87 G A 0.0000
88 C A 0.0000
89 S A 0.0000
90 P A 0.0000
91 T A 0.0000
92 G A 0.0000
93 N A 0.1674
94 L A 0.1551
95 S A 0.0000
96 N A 0.0000
97 I A 0.3138
98 Y A 0.0000
99 S A 0.0000
100 R A -2.5650
101 R A -2.5264
102 L A 0.0000
103 K A -3.3154
104 G A 0.0000
105 D A -1.8517
106 L A -0.9473
107 N A -0.9045
108 L A 0.0000
109 S A 0.0000
110 W A -0.1186
111 V A 0.0000
112 M A 0.0000
113 T A 0.0000
114 T A 0.0000
115 C A 0.3364
116 S A 0.0000
117 T A 0.0000
118 L A -0.2067
119 C A -0.3803
120 A A 0.0000
121 N A -1.7606
122 E A -2.6469
123 R A -2.3523
124 M A 0.0000
125 P A -2.2408
126 E A -3.2037
127 L A 0.0000
128 L A 0.0000
129 E A -2.8837
130 K A -2.6665
131 Y A -1.8272
132 S A 0.0000
133 R A -3.0326
134 G A -2.0015
135 I A -1.4052
136 Y A -1.8992
137 D A -2.7028
138 G A -2.6490
139 D A -3.4972
140 L A -3.1130
141 K A -3.3448
142 D A -3.1964
143 K A -2.3439
144 V A 0.0000
145 P A -1.1575
146 Y A -1.2305
147 K A -1.2002
148 G A -0.3319
149 I A 0.0000
150 L A -0.3523
151 I A 0.3035
152 S A 0.0000
153 L A 0.0000
154 E A -1.8298
155 L A -1.1110
156 V A 0.0000
157 T A -1.6269
158 K A -2.6027
159 P A 0.0000
160 C A 0.0000
161 T A -1.6453
162 E A -2.6992
163 G A 0.0000
164 I A -2.0348
165 E A -2.9300
166 L A -2.2562
167 K A -2.6966
168 S A -2.9208
169 K A -3.1884
170 R A -3.1378
171 P A -2.4810
172 Q A -2.2271
173 L A -1.2941
174 L A 0.0000
175 R A -3.2287
176 K A -3.4420
177 V A -2.4277
178 M A -2.7297
179 K A -4.3953
180 E A -4.5524
181 L A 0.0000
182 E A -4.1290
183 E A -4.7492
184 K A -4.4108
185 V A 0.0000
186 K A -4.9131
187 E A -4.7239
188 L A -3.9249
189 E A -4.1762
190 E A -4.2665
191 E A -3.7565
192 V A -2.5599
193 T A -2.7593
194 R A -3.7482
195 L A -2.8333
196 S A 0.0000
197 K A -3.5836
198 E A -3.3473
199 N A 0.0000
200 V A 0.0000
201 G A -2.3076
202 K A -2.2268
203 S A -1.0329
204 I A -0.6373
205 M A -0.2462
206 K A -1.3962 mutated: FK206A
207 A A -0.4057
208 M A -0.1833
209 T A -0.6608
210 P A -1.0487
211 K A -1.3959
212 I A 0.0000
213 L A -0.5337
214 K A -1.4924
215 T A 0.0000
216 S A 0.0000
217 S A -0.9869
218 L A -0.3063
219 M A 0.0000
220 P A 0.0000
221 K A -1.3607
222 L A -0.7463
223 G A 0.0000
224 Y A 0.0000
225 E A -2.5587
226 K A -2.2832
227 G A 0.0000
228 L A -2.0625
229 E A -3.1588
230 I A -1.8912
231 S A 0.0000
232 E A -2.9172
233 K A -2.5238
234 A A -1.4406
235 C A -0.8991
236 L A 0.0000
237 N A -2.1237
238 G A -2.2717
239 R A -3.0194
240 C A 0.0000
241 R A -2.1537
242 R A -2.0773
243 T A 0.0000
244 V A 0.0000
245 S A 0.0000
246 M A 0.0000
247 E A 0.0000
248 T A 0.0000
249 G A 0.0000
250 C A 0.0000
251 R A 0.0000
252 N A 0.0000
253 V A 0.0000
254 Q A -0.0919
255 L A 0.0000
256 C A 0.0000
257 S A 0.0000
258 T A 0.0000
259 I A 0.0000
260 L A 0.0000
261 N A 0.3490
262 V A 1.2318
263 A A 0.2308
264 F A 0.0000
265 P A -0.1905
266 P A -0.8101
267 E A -1.5078
268 V A 0.4105
269 I A 0.0000
270 G A 0.0000
271 P A -0.1471
272 L A 0.0000
273 F A 0.0000
274 F A 0.0000
275 F A 0.0000
276 P A 0.0000
277 L A 0.7608
278 L A 0.4051
279 Y A 0.0000
280 M A -0.5493
281 Q A -1.6273
282 N A -1.7908
283 Q A 0.0000
284 K A -2.6120
285 E A -3.4017
286 E A -2.7574
287 G A 0.0000
288 D A -3.0330
289 K A -3.1917
290 I A -2.8002
291 V A 0.0000
292 K A -4.3546
293 E A -4.3704
294 Y A -3.9355
295 K A -5.0597
296 E A -5.6815
297 E A -5.7761
298 E A -5.5677
299 K A -5.6046
300 K A -5.4280
301 K A -5.0341
302 E A -4.1917
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Laboratory of Theory of Biopolymers 2018